Tdis030565.1
Basic Information
- Insect
- Tenthredo distinguenda
- Gene Symbol
- bab1
- Assembly
- GCA_947538915.1
- Location
- OX384533.1:24534078-24536530[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-08 1.9e-05 25.1 0.0 2 37 205 240 204 247 0.88 2 4 2.5e-11 3e-08 34.0 0.0 3 39 256 291 254 296 0.88 3 4 0.79 9.3e+02 0.4 0.0 26 34 332 340 325 345 0.83 4 4 5.2e-10 6.1e-07 29.8 0.0 4 41 371 408 356 412 0.93
Sequence Information
- Coding Sequence
- ATGTCCGAAGGCGATATTCCGTCGAGCGGTAGTCAACAACAGCCCACAATATCTCAAAGTTACTGTTTTAAATGGAACGATTACGAGAATCAAGTACCATGCGTTATTCGACAATTGTTAGAAGAGAACTCCATGGTGGACGTTACCGTTTCTGCTGACGGAATCAAGATTCATGCTCATCGCATCGTATTGTCTGCCTGTAGCACCTTCTTTCAAGAAGTATTAAACCAAGTTAATGAAGACTCTCCGACTATAATACTCAGCGGTATATCTGCGCAGGATATTCGTTGCATTATAGATTTTATGTATAATGGAGAAGTCAGTATACCGGTCGAGAATATCAGCAGTTTGTTGGATACTGCTCATTTTTTGAAGATTCATGGCCTTATGGAGATCGATGGTTTGGACGAGAGTGACGGTGTAGCGTGTGAAGATTTCAGTGAAGAGACTGTAGAATCGTTGAGTGAGATAAACGAAACTGAAGATCAGGATTTAAATGCGTTAGAACAGGAATTTGAGAATGTGACTAATAATTCTCTGGATAGACACAACGTCTCTACTACAAATCAGAAAAAAAAACGGAGACGAGATACAGTTAAGAAAGAATACAGCGAAGACATGCTCATAGCTGCTATAAACGATCTAAGAACAGGGCACACTTTAATAGAGGCTGCAACTAATCACGGAATACCAAGGTCTACTTTGTATATGCGAGCCAAGGCCTTGGGTTTGCATCTAAATGCTTCTAGGAATGAATATTCTGCGGAATGTATGAAGGCGGCGATAAATGCTGTGTTAGAGGGTTCGAGCTTGCAACAGGCATCGGAAATGTTTTCTATACCTAAAACTGTACTTTGGCGAAGAATTCAGAAGGAAGGATACCAAATACTTGGCCAGCGTACTGAAATGAAGAAATCTTATGACGCCGATAAGAGGGAAGCTGCGGTTAAAGCATTGGAGAGAGGGGAAAATCTCACCAAAGTTTCTTTGCAGTTTCAAATACCAAAAACGACGTTATTTAGAGACAAAGCTAGACTAGTAGATGAGGGAAAGCTCCCACTGTCGTTTTGGAAAAAACGTAAAACGGAAAACGAAGATTTAAAGAAATCGCGACTGGAAGAAGCAGTGGCGGCTTGTAAGTGTGGAAGAATGTCTCAAGCAGCAGCGTCTATGGCTTACCGAATCCCGAAAACTACGATATGGAGAAGGCTGCAGCAGGATGGAAAAAAATCAAATCGTCCAGTAGATGACCCGAGTCAACAAAAATCTAATGACTTGGACGATATTGATGACCAAAAGGAACAAGGGACTGAATTCACGTATTGCGAGGTCACTTCGGAGATACCGATAACATACATAGACGAAAACGGAATACCAGAAGATTCGGTGATAATTTTAACGACTGACGATGTGGATGGTATGAATCTGGAAGAAGGTACACAAATAATAGATTCCGCTCAAGAATACGTATCCTGCGCATTAAACATTGAGGACAGCTCAAATTACACCAACAGTGAAAGTTAA
- Protein Sequence
- MSEGDIPSSGSQQQPTISQSYCFKWNDYENQVPCVIRQLLEENSMVDVTVSADGIKIHAHRIVLSACSTFFQEVLNQVNEDSPTIILSGISAQDIRCIIDFMYNGEVSIPVENISSLLDTAHFLKIHGLMEIDGLDESDGVACEDFSEETVESLSEINETEDQDLNALEQEFENVTNNSLDRHNVSTTNQKKKRRRDTVKKEYSEDMLIAAINDLRTGHTLIEAATNHGIPRSTLYMRAKALGLHLNASRNEYSAECMKAAINAVLEGSSLQQASEMFSIPKTVLWRRIQKEGYQILGQRTEMKKSYDADKREAAVKALERGENLTKVSLQFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEDLKKSRLEEAVAACKCGRMSQAAASMAYRIPKTTIWRRLQQDGKKSNRPVDDPSQQKSNDLDDIDDQKEQGTEFTYCEVTSEIPITYIDENGIPEDSVIILTTDDVDGMNLEEGTQIIDSAQEYVSCALNIEDSSNYTNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411401;
- 90% Identity
- iTF_01303579;
- 80% Identity
- iTF_01412467;