Basic Information

Insect: Tenthredo amoena
Gene Symbol: gtf3a
Assembly: GCA_963966615.1
Location: OZ016483.1:17311893-17316426[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00095 0.1 13.7 0.1 3 23 803 823 801 823 0.97

2 17 1.2 1.3e+02 3.9 0.7 1 19 829 847 829 850 0.90

3 17 0.49 52 5.1 0.9 2 23 856 877 855 877 0.95

4 17 8.4e-05 0.0089 17.0 1.4 3 23 886 907 885 907 0.98

5 17 0.0043 0.46 11.6 2.1 1 23 914 937 914 937 0.95

6 17 0.00011 0.011 16.7 0.7 1 23 943 966 943 966 0.94

7 17 0.76 80 4.5 3.8 2 23 974 994 974 994 0.96

8 17 1.5e-07 1.6e-05 25.6 2.1 2 23 1000 1021 999 1021 0.97

9 17 2.1e-06 0.00023 22.0 0.1 1 23 1027 1049 1027 1049 0.99

10 17 0.0007 0.075 14.1 2.1 2 23 1061 1083 1060 1083 0.95

11 17 0.0017 0.18 12.8 1.3 1 23 1089 1112 1089 1112 0.96

12 17 0.019 2 9.6 2.7 2 23 1134 1156 1133 1156 0.95

13 17 0.0001 0.011 16.7 0.5 2 23 1163 1185 1162 1185 0.96

14 17 4.3e-05 0.0045 17.9 1.0 2 23 1193 1214 1192 1214 0.96

15 17 0.0013 0.14 13.2 2.3 1 23 1220 1243 1220 1243 0.96

16 17 0.36 39 5.5 3.2 2 23 1250 1271 1249 1271 0.96

17 17 0.012 1.3 10.2 1.8 1 23 1277 1299 1277 1299 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00095	0.1	13.7	0.1	3	23	803	823	801	823	0.97
2	17	1.2	1.3e+02	3.9	0.7	1	19	829	847	829	850	0.90
3	17	0.49	52	5.1	0.9	2	23	856	877	855	877	0.95
4	17	8.4e-05	0.0089	17.0	1.4	3	23	886	907	885	907	0.98
5	17	0.0043	0.46	11.6	2.1	1	23	914	937	914	937	0.95
6	17	0.00011	0.011	16.7	0.7	1	23	943	966	943	966	0.94
7	17	0.76	80	4.5	3.8	2	23	974	994	974	994	0.96
8	17	1.5e-07	1.6e-05	25.6	2.1	2	23	1000	1021	999	1021	0.97
9	17	2.1e-06	0.00023	22.0	0.1	1	23	1027	1049	1027	1049	0.99
10	17	0.0007	0.075	14.1	2.1	2	23	1061	1083	1060	1083	0.95
11	17	0.0017	0.18	12.8	1.3	1	23	1089	1112	1089	1112	0.96
12	17	0.019	2	9.6	2.7	2	23	1134	1156	1133	1156	0.95
13	17	0.0001	0.011	16.7	0.5	2	23	1163	1185	1162	1185	0.96
14	17	4.3e-05	0.0045	17.9	1.0	2	23	1193	1214	1192	1214	0.96
15	17	0.0013	0.14	13.2	2.3	1	23	1220	1243	1220	1243	0.96
16	17	0.36	39	5.5	3.2	2	23	1250	1271	1249	1271	0.96
17	17	0.012	1.3	10.2	1.8	1	23	1277	1299	1277	1299	0.98

Sequence Information

Coding Sequence: atgagtagcTCAGAGGGAGGTATGATATACTTTACCTACGAAGATGATGACCCGTCTGGTAACATTTTACCGGAGGGATCTACTGACCACTTAGAAAGTTTAGatgaatcaaaaatcaaattggACCAAACAGCTAAGGGCAATGCTACCGACCATGACTATATCGATCTTATAgatgagaaagaaattcaagaATTATCTGGCATCGAGGATGGAACGATAATCATAATTCAGGATGATGGGGatgaaggcgaaggcgaaggcgaaggcgatgGCCAGGTTGAGCTCATTCAGGGCGACCTCGACATTTCCCTTTCTAAATCAATAGCATCTCCGTCGTCTAAGGAAGAATCATTTTCtcaaataacaaatttatcTCAATTAAAGAAAGTCACTCCTCGAGTAAAGTTACAAAGCTCGGAGCAAAACTTAGTCAAAGGATTAGCGGagttaagaaaaatgaatacgcAATCTCGTGGTAATAGTAAGCGGTCTCTGGACGAGGCCAAACAGCAGTTAAAAAAGTATTGTCGAACATGCGCAGGGCTAAAGATTCCATTGGTTGATATATTCAGCGACAAGGGTACTCAGATGCGATTAAATCAACAGATGAAACATTTAGAGGAAATAAATCAACAAGAGAGTTTATCAACCCAAATGTGCATGGATTGTATATGCGATTTGAAAAtgagttataaattttttatgcaAATAAAGAAAGCTGAGTTTAAACTGAAATCTATATATACTGCGCTCAGCGAACCTACCGCTAACGACGTAGTTACTAAAGACTTACACTCCGATGAAACGAGTCAAAATGTTGCCTGGAACAATCCTAAAGTTAAGATTGAAAAAGACGTGCATACGTACGccaaaaagaaatcaaatcttACTACAAGCTCGCAAAAGTCTGAACAAATGGCTAAAAATTCTGCTTCATTTGCGCTGCAAGATGATTCTAGTGTTTCCAAATCAACTGGGACAAAACTTACGGAAGAACCGGTACCAGTTTCCGATGCCGAATGCATGAATGATATGTTTGAAGATGTTACCGATCCTAATCGTAACGACGACAATGATTCTATCGAGGAATTCGACCCGGAGGATCCACCAAATAATCCTGATAGCTCTGATTATATAGAATCTAACGACGAGCTTGAAGAACTTGGCTTACATAAGGCTAAAAAAGCTCGTATCATGTCCAAcaatgaagaagaagacttCTCGACAAGTCCAGCGGTGTATCAGTACGATTCTGCTAAAAGGGCATATGTGAAATACGAAGCGGGAGGAAGCACAGAAGATTTACCTGCTGAACTTAGAGATATAATTAAAACAGAAACAGTTGATGATGCCGCTGATAACAAGAAGCAGCCCAATATTTTGAAGAGAAGACTGTCCATGCCACTTAAACCAAAACCAGTCTTAGACTCTCTAGAAGCAAGTCATTCGGCGGactcaaataattcaaataacgGTGAGAAAACGATGCAGAAATTGAGCATGGATCATCCTATTAGCATTGGCACAAAAGGCGAAGACGGAATTATGTACGTTACAGTTAAGGGGTCCAAACCAAACGAATTACTATTGGTAAAAGTTAAAAAGATGGACAAACCTggggaaaaaaacgaagatcCTAATCTTGTACATGCTGCGATTGACATGAAACCCGTTGATAGAATGCTGAAAAAATATGAGGCactgaaaatgaaagagaaagatttGTTCtctgataaatataaaaaacctGATATTAGAGAACAGATAATAGAAGAACAAATCGAAGAATATAAAAGGAGGAGAGAACAGGTATTGGGCGGTAATATAATTGGTCTATCTAGCGCAATGAATAGCGAGGAGGGATCGTTGAAGCTAACAAAAACAGATGGGAGTTCAAACTATCAGAGACGATACTCTCAGCAAGAGACAGAAGAGAATGATACAGCCAAAAGAAAAGAGGACAGTACAGAAATGTTGGAGCTATGCGAAGAAAGTAAAATTGACGAAGAAGACAAAGAAGGATATGAAGAATCCATTGAAGAACATTcaacaaaagaaaaacctTACTCAAGATCGCACGAATACTTAGCTCGATTAGCAAGGCTCAAACAAAAATGGGAAGAAGCTAAGCAGAAGCGAGAATCTTTGCAGAAAGAATTGGACGAATCATGTGCTGAaggaaatcaagaaaaattagaaagaattTTGGGAGAGAAGGACAAGAACTTAGAGGAGTTTCAAGAGTATTTAAAACAGAGGAAGATTGTAATAAATAGATTAAAAGATGAAGATATAATTTCACTGTACGAGGATAGAAATAACGCTGTATTAAAAGAAAGCCTTTCAGAATCACTGGAAGATATATTTATGGAAGAATCTATTTCTATAGAAGATTATTTGGATTGTGATTATTGTCCGCAAACATTTCCTACTATAGACGTGCTAGAAGAACACTTGAAGACAcatgattataaaattatgCACTATTGCGAGGACTGTCTTACAGAATTTCCCACTAACAAAGCAAAGAAGAATCATAACATAACATGCATGCAGAAATTAATATGTAAATATTGCGACTTGATGTTAGATTCTAAAGGTAAAAAACGACAACACGAACAGAAACATTGCGACAATATGTATGGCCAACTGTGCGATTACTGTGGTGAGAAGTTCAAGCACCAAGGAACACTAGATCAACACATTAAAATGCAGCACATGAGCTGGGAGAAGGTTTTCCAATGTCCTAAATGCCCCAAAAAATTTGCATTCAAGCAAAAGCTTAGCTTTCATTTGAAATCTGTCCACACAACGTTGAGAGCTTATTTATGCGAAGATTGTGGTGCGGATTTCAAGAATCCGGCAAGCTTACGGCACCATAGGATTCGCAAACATCAACCGGTCGGTAACAAGAGAGAATGTACGGTTTGCCATAAAATGGTACCATTCTATAGTCTCTCTAAACATATGCATACCCACAAAGCATACACAATACAATGTCCACACTGTGACAAAATGTTCAAGAATAGTTCGACGCTCAAGCAACACGTCAGAATTCACGAAGACCAAAGACAATATAGATGTGATATTTGCGGCGTTGGATTCAATCGAAGAGATGGTTTGAGATTGCATATGAAAGTACATGAGAAAACTGATAGTCGAGGCTTGAAGGAATGCTCGTGCCAAGTATGCGGTGAGAAGTTTCCCAATCATTCTATGCTAGTAATTCATAGAAACAGAGTCCACAAGGATGGAAGACAATACACGTGCCACATCTGCAACAGATCAATGATTTCACCGAGATCTTTGGCATGGCATATGTCGCATATACACAACGAAGCTCTGCCCGGTGAGGTAAAATCGAATCCGGACACACCTCAAGAGAAGAAACGAGTGACTTGTTACCATTGCGAAAAGACATTTAAGACAGAAATGATCCTACGAACtcatataaaaaatacacacGTTGAAAAGGACCCAATGAAATGTGGGGAATGTGATCAAGTATTCACCTCTGAAGTCAGACTGAGACACCATATGATGGTAGTGCATAATAGACTGGAAGGAACTTTGCCATGTCCGCATTGTCCAAAGAGATTTGTTAATCAGCTCAGATTGAAGACACACATGATATCACACTCTGAGGATAGACCATACACATGCGAGATATGCggttttaatttaaaaacaaaaatccaaCTGATCAAACATCACCAGAATAGACACAGCGACGAACGGCCGTTACAATGCAGATATTGTCCATGGAGATGCAAGCAAGTCAGTGCCCTTGTTTGTCATGAGAGAACACACACCAACGAACGGCCGTACGCTTGCAGTGTTTGCAGACAACGATTTAAATACCTTGGTGATAAGAACAAGCATGAAAGAAGACACGAAAGTCTGGGAGGTTCCGGATTCAAGAGAATAGTCACTGGCAGGAATACTAAACAACCAAAAATACAACAGCCTGATGTCACCTCTGGCTCTGAACAAGAACTGGAAGAATACGATGAAGTTCAAGCTCAATATGATAACGAAGATCAGTATGAAGAACAAATCGAGGATCAGTACGAAGATGAACAGATAGCAAAATTCGAGGCGCAGAGTATAGAAGGAGACTACGAACAGACTTATGATCAGGAATACGAGACCTCGAGAGAAGCTTCTGAAGTGGCAGAAGTTATAATGAATATGGAAGATACGACCGTTTATACAGAAGAAGTGACCGCAGACAACCTGGAGACTACGGAGATTATAACTGATGAAATGACCAATCAAATATTGCAATCTGGCACTGTTGTGCATTTGCAACAGCAAGATGATTCTGGAAAAATACAAGTTATTCCCGTAATGCTGTCTTTGCCAGATTTAACAGATGCTAATTCTGAAGTAAATCTTGCTACAGCTTCGATTATGTACAATACTTAA
Protein Sequence: MSSSEGGMIYFTYEDDDPSGNILPEGSTDHLESLDESKIKLDQTAKGNATDHDYIDLIDEKEIQELSGIEDGTIIIIQDDGDEGEGEGEGDGQVELIQGDLDISLSKSIASPSSKEESFSQITNLSQLKKVTPRVKLQSSEQNLVKGLAELRKMNTQSRGNSKRSLDEAKQQLKKYCRTCAGLKIPLVDIFSDKGTQMRLNQQMKHLEEINQQESLSTQMCMDCICDLKMSYKFFMQIKKAEFKLKSIYTALSEPTANDVVTKDLHSDETSQNVAWNNPKVKIEKDVHTYAKKKSNLTTSSQKSEQMAKNSASFALQDDSSVSKSTGTKLTEEPVPVSDAECMNDMFEDVTDPNRNDDNDSIEEFDPEDPPNNPDSSDYIESNDELEELGLHKAKKARIMSNNEEEDFSTSPAVYQYDSAKRAYVKYEAGGSTEDLPAELRDIIKTETVDDAADNKKQPNILKRRLSMPLKPKPVLDSLEASHSADSNNSNNGEKTMQKLSMDHPISIGTKGEDGIMYVTVKGSKPNELLLVKVKKMDKPGEKNEDPNLVHAAIDMKPVDRMLKKYEALKMKEKDLFSDKYKKPDIREQIIEEQIEEYKRRREQVLGGNIIGLSSAMNSEEGSLKLTKTDGSSNYQRRYSQQETEENDTAKRKEDSTEMLELCEESKIDEEDKEGYEESIEEHSTKEKPYSRSHEYLARLARLKQKWEEAKQKRESLQKELDESCAEGNQEKLERILGEKDKNLEEFQEYLKQRKIVINRLKDEDIISLYEDRNNAVLKESLSESLEDIFMEESISIEDYLDCDYCPQTFPTIDVLEEHLKTHDYKIMHYCEDCLTEFPTNKAKKNHNITCMQKLICKYCDLMLDSKGKKRQHEQKHCDNMYGQLCDYCGEKFKHQGTLDQHIKMQHMSWEKVFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECTVCHKMVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDICGVGFNRRDGLRLHMKVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISPRSLAWHMSHIHNEALPGEVKSNPDTPQEKKRVTCYHCEKTFKTEMILRTHIKNTHVEKDPMKCGECDQVFTSEVRLRHHMMVVHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYACSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVTGRNTKQPKIQQPDVTSGSEQELEEYDEVQAQYDNEDQYEEQIEDQYEDEQIAKFEAQSIEGDYEQTYDQEYETSREASEVAEVIMNMEDTTVYTEEVTADNLETTEIITDEMTNQILQSGTVVHLQQQDDSGKIQVIPVMLSLPDLTDANSEVNLATASIMYNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00938951;
90% Identity: iTF_01412553; iTF_00938951; iTF_00939810; iTF_01303665; iTF_01414417; iTF_01413627;
80% Identity: -