Basic Information

Insect: Macrophya annulata
Gene Symbol: gtf3a
Assembly: GCA_963924015.1
Location: OZ001257.1:40753173-40757724[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.00055 0.057 14.5 0.0 2 23 808 829 807 829 0.97

2 17 1.3 1.4e+02 3.9 0.7 1 19 835 853 835 856 0.90

3 17 0.54 57 5.1 0.9 2 23 862 883 861 883 0.95

4 17 5.6e-05 0.0058 17.6 1.6 3 23 892 913 891 913 0.98

5 17 0.0048 0.49 11.6 2.1 1 23 920 943 920 943 0.95

6 17 0.00012 0.012 16.7 0.7 1 23 949 972 949 972 0.94

7 17 3.3 3.4e+02 2.7 3.6 2 23 980 1000 980 1000 0.95

8 17 1.7e-07 1.8e-05 25.6 2.1 2 23 1006 1027 1005 1027 0.97

9 17 1e-06 0.00011 23.1 0.1 1 23 1033 1055 1033 1055 0.99

10 17 0.00078 0.081 14.1 2.1 2 23 1067 1089 1066 1089 0.95

11 17 0.0013 0.13 13.4 1.6 1 23 1095 1118 1095 1118 0.96

12 17 0.021 2.2 9.5 2.7 2 23 1140 1162 1139 1162 0.95

13 17 0.00012 0.012 16.7 0.5 2 23 1169 1191 1168 1191 0.96

14 17 4.7e-05 0.0049 17.9 1.0 2 23 1199 1220 1198 1220 0.96

15 17 0.0015 0.15 13.2 2.3 1 23 1226 1249 1226 1249 0.96

16 17 0.4 42 5.5 3.2 2 23 1256 1277 1255 1277 0.96

17 17 0.013 1.4 10.2 1.8 1 23 1283 1305 1283 1305 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.00055	0.057	14.5	0.0	2	23	808	829	807	829	0.97
2	17	1.3	1.4e+02	3.9	0.7	1	19	835	853	835	856	0.90
3	17	0.54	57	5.1	0.9	2	23	862	883	861	883	0.95
4	17	5.6e-05	0.0058	17.6	1.6	3	23	892	913	891	913	0.98
5	17	0.0048	0.49	11.6	2.1	1	23	920	943	920	943	0.95
6	17	0.00012	0.012	16.7	0.7	1	23	949	972	949	972	0.94
7	17	3.3	3.4e+02	2.7	3.6	2	23	980	1000	980	1000	0.95
8	17	1.7e-07	1.8e-05	25.6	2.1	2	23	1006	1027	1005	1027	0.97
9	17	1e-06	0.00011	23.1	0.1	1	23	1033	1055	1033	1055	0.99
10	17	0.00078	0.081	14.1	2.1	2	23	1067	1089	1066	1089	0.95
11	17	0.0013	0.13	13.4	1.6	1	23	1095	1118	1095	1118	0.96
12	17	0.021	2.2	9.5	2.7	2	23	1140	1162	1139	1162	0.95
13	17	0.00012	0.012	16.7	0.5	2	23	1169	1191	1168	1191	0.96
14	17	4.7e-05	0.0049	17.9	1.0	2	23	1199	1220	1198	1220	0.96
15	17	0.0015	0.15	13.2	2.3	1	23	1226	1249	1226	1249	0.96
16	17	0.4	42	5.5	3.2	2	23	1256	1277	1255	1277	0.96
17	17	0.013	1.4	10.2	1.8	1	23	1283	1305	1283	1305	0.98

Sequence Information

Coding Sequence: ATGAGTAGCTCAGAGGGAGGTATGATATACTTTACCTACGAAGATGATGACCCTTCTGGTAACATTTTACCGGAGGGATCTACTGACCATTTACAAAGTTTAgatgaatcaaaaattaaatttgaccaAACATCTAAAGTCAATACTAACGACACTGTCAACGACCATGACTATATAGATCTTATCGATGGAAAAGGAATACAAGAATTATCTAGCATCGAGGAcggaacaataattattattcaggaTGATGGAGATGAGGTCGAGGGTGAGGGCGAGAGCGGGGTTGAAATTGAGGTTGAAGGCGAGGGCGACGTCGCTATTTCCCTTTCAAAATCATTATCATCTCCTACTTCTAAGGAAGAatctttttctcaaataacaaatttatcTCAACTAAAAAAAGTAACTCCTCGAGTAAAGCTGCAAAGCTCGGAGCAAAACTTAGTCAAAGGATTAGCAGagttaagaaaaatgaattctcAAACTCGTGGTATTGGTAAACGGTCTTTGGACGAGGCGAAAAATCAGTTAAAAAAGTATTGTCGGACATGCGCAGGTCTAAAGCTACCGTTAGTAGATATATTCAGCGACAAGGGTATTCAAATGCGATTAAATCAACAGATGAAACATTTGGAGGAAATAAATCAGCAAGAAAGTTTATCTACTCAAATGTGTATGGATTGTATATGCGATTTGAAAatgagttataaattttttatgcaaataaaaaaagctgaATTTAAacttaaatctatatatacagcACTTAGCGAACCATCTGCTAACGACGCTGCTGTTAAAGAATCACAGTCTGATGAAGCGAATCAAAATGTTGCCTGGAACAATCCTAAAGTAAAGATTGAGAAAGACGTACATACttatgctaaaaaaaaatcaaatttatctgTGAGTTCACAAAAGTCTGAGGAAACCTCAAAAAGTTCTTCTCTATTTCCGCTGCAAGTTGATTCTACTGCTTCTAAATCAGCTGCAATAAAACTCAAAGAAGAACCCTTGTCTGTTTCTGATGGAGAATGCATGACCGATATGTTCGAAGATGTTACTGACGCTAATCGTAACGATGACAACGATTCAATCGAGGAATTTGACCCAGAAGATCCACCGAACAATCCTGATAGCTCTGATTATGTAGAATCTAATGATGAACTTGACGAACTTGGCTTACAAAAGGCTAAAAAAGCTCGTATCATGTCCAAAAATGAGGAGGTAGACTTCTCGACAAGTCCCGCGGTTTATCAGTATGATTCGgctaagaaagcatatattaaATACGAGGCGGGAGAAAGCAAGGAAAATTTAcctatagaaataaaagatataattaaaacaGAAACAGTAGATGATGCGGCTGATAATAAGAAGCAGCCGAATATCTTGAAGAGAAGACTGTCTATGCCACTTAAACCAAAACCAGTCTTAGACTCTTTAGAAACAAGTCATTCGGCAGACTCTAATAATTCCAATAGTGGAGATAAAATAGTGCAGAAATTGAGTATGGATCATCCTATTAGCATTGGCACTAAGGGTGAAGACGGGATTATGTATGTTACAGTTAAGGGGTCCAAACCAAATGAATTGCTTTTGGTAAAAGTTAAAAAGATGGACAAACCTGGGGAGAAGGCCGAGGACTCTAATCTCGCACATGCTGCGATTGATATGAAACCTGTTGATAGAATGCTGAAAAAATATGAGGCgttgaaaatgaaagagaaagattTGTTCTCAGATAAGTATAAGAAACCTGATATAAGAGAACAGATAATAGAAGAACAAATTGAAGAGTATAAACGAAGGAGAGAACAGGTGTTGGGTGGTAATATGATTGGTTTATCTACTGCAATGAGTAATGAGGAGGGATCGTTGAAGCTAACAAAAACAGATGGAATTTCTAGTTATCAGAGACGATACTCTCAGCAAGGGACGGCAGGAGAGAATGATACAgccaaaagaaaagaagacagTCCAGAAATGCTTGAGCCAtgtgaagaaattaaaatcgacGAAGAGttcaaagaagaagatgaagaatctATTGACCAACAATCGACCAAAGAAAAAACGCATGCAAGATCGGAAGAATATTTAGCTCGATTAGCAAGGCTTAAACAAAAATGGGAAGAGGCTAAGCAGAAGCGAGAGTCTTTACAGAAAGAATTGGACGACTCAAGCACGGAGGGAAATCAAGAGAAATTGGAAAGAATTTTGGGAGAAAAGGACAAAAACTTGGAAGAGTTTcaagaatatttgaaacagagaaagattgtaataaatagattaaaaGATGAAGATATTATTTCACTTTACGAAGATAGAAATAATGCTGTATTAAAAGAAAGCCTTTCAGAATCACTAGAAGATATATTTATGGAAGAATCTATATCTATCGAAGATTACTTGGAATGTGATTATTGCCCGCAAACATTTCCTACCATAGATGTATTGGAAGAACACTTGAAGACACACGATTACAAAATAATGCATTATTGTGAAGACTGTCTAACAGAATTTCCTACTAacaaagcaaagaaaaacCATAACATCACATGCatgcaaaaattaatatgtaaatattgcGACCTGATGTTAGACTCTAAAGGCAAAAAACGACAACATGAACAGAAACATTGCGATAATATGTATGGCCAATTATGCGATTACTGCGGAGAAAAGTTCAAACACCAAGGAACACTGGATCAACATATTAAAACACAGCACATGAGCTGGGAGAAGGTTTTTCAATGTCCAAAATGCcccaaaaaatttgcattcaaacaaaaattgagCTTTCATTTGAAATCTGTACACACAACGTTGAGAGCTTATTTATGCGAAGATTGTGGTGCGGATTTCAAGAATCCAGCAAGCTTACGGCACCACAGAATCCGCAAACATCAACCGGTTGGTAACAAGAGAGAATGCATGGTTTGCCATAAAATGGTACCATTTTATAGTCTCTCCAAGCATATGCATACCCACAAGGCTTATACAATACAATGTCCACACTGTGacaaaatgttcaaaaatagtTCGACGCTTAAACAACACGTAAGAATTCATGAAGACCAAAGACAATATAGATGTGACATTTGCGGCGTCGGATTTAATCGAAGAGATGGCCTAAGACTACATATGAGAGTACACGAAAAAACTGATAGCCGAGGCTTGAAGGAATGTTCGTGCCAAGTCTGCGGTGAAAAGTTTCCGAATCATTCTATGCTAGTAATTCATAGGAACAGAGTTCACAAGGATGGAAGACAGTACACATGCCACATCTGCAACAGGTCAATGATATCCCCAAGATCTTTGGAATGGCATATGTCGCATATACACAATGAAGCTCTTCCTGGTGAGGTAAAACCAGATCCGGACACACctcaagaaaagaaacgagtGACTTGCTACCATTGcgaaaaaacattcaaaacAGAAATGATTTTACGAACTCATATTAAAAATACACACGTTGAAAAGGACCCAATGAAATGCGGGGAATGTGACCAAGTATTTACCTCTGAGGTAAGACTGAGACACCATATGATGGTGGTGCATAATAGACTGGAAGGAACTTTGCCCTGTCCGCATTGTCCAAAGAGATTTGTTAATCAGCTTAGATTGAAAACACACATGATATCACATTCTGAGGATAGACCTTACACCTGTGAAATATGcggttttaatttaaaaacaaaaattcaattgattaaACATCACCAGAATAGACACAGTGACGAACGGCCTTTACAATGCAGATATTGTCCGTGGAGATGTAAGCAAGTCAGTGCTCTTGTTTGTCATGAGAGAACACACACAAACGAACGACCTTACGCTTGCAGTGTCTGCAGACAACGATTCAAATACCTTGGTGATAAAAACAAGCATGAAAGAAGACACGAAAGTCTTGGAGGATCTGGATTCAAGAGAATAGTCACCGGCAGAAATACTAAACAACCAAAAATACAACAACCTGATGTTACTTCTGGTTCTGAACAAGAATTAGAACAAGAAGAATATGACGAAGTTCAAGCCCAATATGATAATGAAGATCAGTATGAGGAACAAATTGAGGATCAATacgaagatgaagaaataGCCAAATTTGAGGCAGAAAGTATAGAAGGAGATTACGAACAGACTTATGATCAGGAATACGAAACCTCTAGAGAAGCTTCTGAAGCGGCAGAAGTTATAATGAATATGGAAGACACGACTGTCTACACAGAAGAAGTGACGGCAGACAACCTGGAGACAACAGAGATAATAACTGATGAAATGACCAATCAAATTCTGCAATCTGGAACTGTTGTACATTTACAACAGCAAGATGATTCTGGAAAAATACAAGTTATTCCTGTAATGCTGTCTTTGCCAGATTTAACAGATGCTAATTCTGAAGTAAATCTTGCTACAGCTTCTATTATGTACAATACTTAA
Protein Sequence: MSSSEGGMIYFTYEDDDPSGNILPEGSTDHLQSLDESKIKFDQTSKVNTNDTVNDHDYIDLIDGKGIQELSSIEDGTIIIIQDDGDEVEGEGESGVEIEVEGEGDVAISLSKSLSSPTSKEESFSQITNLSQLKKVTPRVKLQSSEQNLVKGLAELRKMNSQTRGIGKRSLDEAKNQLKKYCRTCAGLKLPLVDIFSDKGIQMRLNQQMKHLEEINQQESLSTQMCMDCICDLKMSYKFFMQIKKAEFKLKSIYTALSEPSANDAAVKESQSDEANQNVAWNNPKVKIEKDVHTYAKKKSNLSVSSQKSEETSKSSSLFPLQVDSTASKSAAIKLKEEPLSVSDGECMTDMFEDVTDANRNDDNDSIEEFDPEDPPNNPDSSDYVESNDELDELGLQKAKKARIMSKNEEVDFSTSPAVYQYDSAKKAYIKYEAGESKENLPIEIKDIIKTETVDDAADNKKQPNILKRRLSMPLKPKPVLDSLETSHSADSNNSNSGDKIVQKLSMDHPISIGTKGEDGIMYVTVKGSKPNELLLVKVKKMDKPGEKAEDSNLAHAAIDMKPVDRMLKKYEALKMKEKDLFSDKYKKPDIREQIIEEQIEEYKRRREQVLGGNMIGLSTAMSNEEGSLKLTKTDGISSYQRRYSQQGTAGENDTAKRKEDSPEMLEPCEEIKIDEEFKEEDEESIDQQSTKEKTHARSEEYLARLARLKQKWEEAKQKRESLQKELDDSSTEGNQEKLERILGEKDKNLEEFQEYLKQRKIVINRLKDEDIISLYEDRNNAVLKESLSESLEDIFMEESISIEDYLECDYCPQTFPTIDVLEEHLKTHDYKIMHYCEDCLTEFPTNKAKKNHNITCMQKLICKYCDLMLDSKGKKRQHEQKHCDNMYGQLCDYCGEKFKHQGTLDQHIKTQHMSWEKVFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPVGNKRECMVCHKMVPFYSLSKHMHTHKAYTIQCPHCDKMFKNSSTLKQHVRIHEDQRQYRCDICGVGFNRRDGLRLHMRVHEKTDSRGLKECSCQVCGEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMISPRSLEWHMSHIHNEALPGEVKPDPDTPQEKKRVTCYHCEKTFKTEMILRTHIKNTHVEKDPMKCGECDQVFTSEVRLRHHMMVVHNRLEGTLPCPHCPKRFVNQLRLKTHMISHSEDRPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYACSVCRQRFKYLGDKNKHERRHESLGGSGFKRIVTGRNTKQPKIQQPDVTSGSEQELEQEEYDEVQAQYDNEDQYEEQIEDQYEDEEIAKFEAESIEGDYEQTYDQEYETSREASEAAEVIMNMEDTTVYTEEVTADNLETTEIITDEMTNQILQSGTVVHLQQQDDSGKIQVIPVMLSLPDLTDANSEVNLATASIMYNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00938951;
90% Identity: iTF_01411755;
80% Identity: -