Basic Information

Gene Symbol
Znf219
Assembly
GCA_030765045.1
Location
CM060972.1:108896926-108909064[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.0007 0.28 14.0 0.1 1 23 113 135 113 135 0.98
2 16 4.2e-05 0.017 17.8 0.3 1 23 151 173 151 173 0.98
3 16 8.2e-07 0.00033 23.2 2.2 1 23 179 201 179 201 0.99
4 16 4.3 1.7e+03 2.1 0.8 2 23 310 333 309 333 0.82
5 16 0.0038 1.5 11.6 3.7 2 23 339 361 339 362 0.94
6 16 0.0039 1.5 11.6 1.5 1 23 416 439 416 439 0.97
7 16 0.17 66 6.5 0.2 1 23 606 628 606 628 0.97
8 16 8.6e-05 0.034 16.8 0.9 1 23 636 658 636 658 0.99
9 16 0.00048 0.19 14.5 3.7 1 23 664 687 664 687 0.97
10 16 0.0009 0.36 13.6 2.1 1 23 1182 1205 1182 1205 0.95
11 16 0.0014 0.58 13.0 0.4 3 23 1505 1525 1504 1525 0.98
12 16 0.018 7.2 9.5 5.1 1 23 1531 1554 1531 1554 0.97
13 16 0.00013 0.051 16.3 2.6 1 23 1596 1620 1596 1620 0.98
14 16 0.49 2e+02 5.0 0.5 1 23 1751 1774 1751 1774 0.95
15 16 0.018 7.1 9.6 0.5 3 23 1834 1854 1832 1854 0.93
16 16 0.0082 3.2 10.6 5.9 1 23 1860 1882 1860 1882 0.98

Sequence Information

Coding Sequence
ATGCAAGATATGGCAACAATGCAACAACATTCCATCACGTCTCCGGCTCCAGCGTCAACAATACAAGGGTCCTCTGCGGATTCCTTGGCGAGTACCAGCTGCAACGCTGATATCCATCATGAAACATCACGAACTGACGCTGAGAGTTACGTAGTCAAGTCAGAGCCAGAACCAGCACACAACGAAGACGACGAACATGCAACGAAACAGACCGAGCTTGATGATGAAAACAACGATGTCTCAAGACTGAATTCTTCGTCCACCGATACGGAAGGAGAAGCGAAGATGGAGTCTTTCTCCTCGGACAGTCACAGCGAGGATACCGATGAGACTAGGTATGCTTGTCCGATCTGCGACACCATCATGCCCTCGCAGCACGATCTCACGCTCCACATCCGTTCGCACAACAACGACGACGGCAAACTGTCGCCTCTCACGTGCACCAAAGCATACACGTGCAAGATCTGCAGTAAGGTGCTAAGTTCCTCGAGTTCCTTGGACAGGCACGTGTTGGTCCACTCTGGGGAGAGGCCCTTCAAGTGTCGCATCTGTGGCGTGGCCTTCACCACCAACGGCAACATGCACAGGCACATGAGGACCCACAATACCACCAAGAACGACCAGTCTTACGAGAGTGATGGCAGCACTGACAGTGGTGGCTCCTTCAAGAGAAGTCCTCAACTGTCGCCGCCAAACTCAGCAAAGAAGAGAAGAGTTGGTCCTCATACATCTCCCACAGAGTCCACATGTAGCAGCAAGCCCTCAGAGTCACCACCTTCCAGCACACAGTCACCAAGTTCCACTGAGGGTGCTCATAAAAGGAAAGCTGCAGACTTCCTTACAGAATCAGGTGTCTGCAATGAAAGAAGGAGGATCAAACCAAGCACAGCTGAAGATCATACTGAAgcaacatttgtacaaaacctTCGCTGTCCTGCATGCAACAAGGATCACTTCACCTCCCTTCAAAACTTGGAAACACATTTGGAGGAAACTCACCCACATTATCATCGGCGGTGTCAATTCTGTGACTTGGTTTTCAAGAACCATGCTGCACTGAATCGCCATCTATTCATGACTCACCATAATAAAGGTAACAAATCTCCCAATAAGAACTCTCAACGAACTTCAACCGTGTTTGGTTTTGATGATTTAACAAAATGGGAGTTCTCAAGTAAGAAATTCCCTCATATTGCAAGAATAGTCTGTGAACAGAACATTCATAAAGCATCTAGTGATACCCACTTTCAGTGCAATAAATGTGAAAGGGCATTCCCATGTGCTAGTGCCTTAAACATACACCAGAAGAACTATCACAGTCGCAGTGACTCTGGCAATGATATTGCAGAGTCTCATAGTGACAGTGATGCCCCTACTGACCTCAGCTGCCCAAGAAAACGGCCTCCTGCAACTGAAACTGCTTGTGAATCTGAAGAAGAGTTcgaagaacgaaagagagagagttTCTTTGCTGTTCTTGACCTCCAGAACAAAtcttctccatcatcaccaccctCATCAGAGCGGAGGGAAGATCTCACAGATGACAGCATGTACTTCAGTCCTGCTGGGAAAGCCATGGATGGAACAAAAGACTTGGCAGATATTCAAAGCATCATATCTGTAGCCTCCGCAGGAGGTCTTATCCAAGACTTATCAAAATCTCCACCACAGAACGGCCAGTGTGGAAGTGACTTGCTGTCACCTGATAGTGGCGTCAGAAGTAGCATCAGCATGATGGATTCTGGTGCTGGTGAAGAAGAGCAACAAGACTGTTTTGCAGCAGAATTCAGACGCATGAAACTAAAGGGGGAGTTTCCCTGCAGACTTTGTACAGCAATATTCCCAAATCTTCGAGCACTAAAGGGACATAATCGTCAACATCTCTGTGTTGGTGTTGGACCTTTCAGATGTAATATGTGTCCATATACCAATGCAGATAAATCAACTCTGGTTAGACACATGAGGACACACAATGGTGACCGTCCTTACGagtgtaaaatttgtaaatatgCATTCACAACAAAGGCAAACTGTGAGAGACATTTGAGAAACAGGCATTCCAAACTCTCCAGAGAAGACGTGAAGAACTCAATAATATATCATCCTTCAGAAGATCCAACAAATGATCCTGATTTCACAGGGAAGTTGCAGATAGCACTGCAGTCACGAGAGGAAGTCAAAAGGTCCTTAGTCTTTGGTAACCACAGCCCCTCCATAGAGGAAGTAAGCAAGTCTGAAAACTCCATCAACTATCACTATTCGCTGGATGAAAGTGCAAAAGATTCTTATGTTGAGAAAGAACCAGTGAAAACAATGAGAGTTCACGAAGAAACAGAACAATTTGTCACAAGAAATTCAGTTTCAAGTGAGACGCAAACCCCTCCACATACAAGTATCTCACCACTCATCTTCAGGGCTCAACAGCGAGttgttacaaatataaaacaaatccgTCCATGGGAAACACAAGAAGCTGCAACTATGACAACCATTGAAGATGAGGACGGTAGTGAGGATAGAAACATGCATCATGAAACTGAAAACACTGAAATCCTAGTCAATTTTACCAAAAGTGGTAACTCCTATAATAAGTTACAAGACCAAAGATTACCCTTAGTGGATATTTCTTGTAGAACTCCCCCCTCAAGCTCGTACTCATCACCTCTGAGAGAGACAAATTCCCCACTGGATCTCACAGTAGATGTCCTAGATTTAagcacaaagaaagaaacaaccaaAGAAtctgatgatgacgataatgatgatgaacatGAAGTGCCTCAAGATTTATCAAATAAGTCTGCAGTAAATAAAGTTGAATACAACAATACCAGATATGGACCAATGAAGTTCATGCCAAAGTCGGACAACTTCCAGAAAGCTAGTACTGCAGCTCAGCCCATCAGTGTAAATCAGCATTTGTTCACCAGAGGTACAATGTCCCCTCATCAGCAAAGCCCCAGTACAACGCCTACGACCATACCAAAGCTAGATATAAACACTGCAGGGTTTTATGCTTCTCCATTAAACCCTCTgtacaacatcaacaacaatggTTTTCCATTTTCACAGTCTCAGACCACATTTCCATTACATCCGTATGTAATGTACCCACATGCACTATTCTCCAATACCAATGTGGACGATATCAGAACACGTCTACAGAAAGAGCTTATCAACAGCCTGCAACTTTCTGGTGGTACTTTGCTGGACCCAATGGTGATAGCAGCATCTGCAACAGACAGACTTCAAGCACTTCATCAAAAGGCATACGAGGAGTACTCCAGACACAAGGTTGATGCAAAGTTACCATACACTGACACTCAAGTGGACGATGGAAGAAAATCTGTTTCTCTTCCTGTGAAAGACCCAGAGAAGACCACCCCTGTGACAAGCATTGGCAGCACATCACCGGTGATCAAGGTATCTCCAGCATCAAAACCACCAAGAGATCGTGATAACTCATCAGTTAAAATGGTGATCAAAAATGGAGTTCTGATGCCAAAGCAGAAGCAGAGGCGATACAGAACTGAACGCCCTTTTGCTTGTGAGCACTGCTCAGCAAGGTTTACTCTGCGCTCAAATATGGAACGCCATATCAAACAGCAGCACCCTCAGTTCTGGACGCAGAGACAGAGGAACAACATTGGCAACACTGGGCCTGGTCGACGTAGCCATATACCTCCTAGTCTGACAGTTCCATCACCAACACAGATTAGAAAACCTCCAGAATCAGATAACCTCACTGCTCAAACCAAGAGTACAGAAGTTGCTCCATTACCTACAATCATAAACATTCCAGAACCTCCAAAAGATTTTCAGATCTCTAATCTGATCCGTAACAACTTCAGCAGTGATGCCAACTCCGAAGCTCACATAATTATACCAAAGACAAAAGATGAACTCACAAGCAGCACTCTGCTGGCTGAGAGTGTTAAAACCAAAGATAACTCTAGtattataaacaataataataattataacaagcCCTTCATTTCTGATGAAGTCAAATTAGCAATTGCTCAGCAGCTCAAATCAAAACTTATAGCCACAATATCGGACAGTGAAGAAAAGGACATCACTGGCAGGGAGGCAAAGAaagatgacgacgatgatgaaaaTGAGTTAGTAATTGATGAAGAAAAGGATGCTGAAGAGGCAACAGAAGATAAGCAAGTCAAAGAGGAGAGTAAAGATAACAACGAAGGAACGAGCAACAACAGCGTAGGAAAGGACGTGGACCTTGCGAGTGTGTCAAGACTGCTTGATAATGCAACAACTCAAACAAAGGCATTTCAGCATTACTTCCGAGGTACACAGGATGGGGAAGATGCCCTGGAGGGAAGCGAGGAGGATGAGGAAGGACTTGTGGCAGGCAGTAACAGTGAAGGGAACAACTCGGGCAGCGACGAGAATAGGTCAGAATGTGAACTTGGAACTGCTAATACAAAGAACATTGCAGGAGAAAAGAAGAAGAGTGCATACTCGCTGGCACCTAACCGTGTGGCGTGCCCGTACTGTTTCCGCAAGTTCCCTTGGTCGTCCTCGCTGAGACGCCACGTTCTCACTCACACGGGACAAAAGCCCTACAAGTGCCCACACTGTCCACTCCTCTTCACCACAAAGTCGAACTGTGATCGTCACCTCCTTCGCAAACACGGTGGACAGTCAGCCTCGTCGAGTTCCCAAGGAACAAGTGCTGGCAATACTTCGTCCAGCTCGGAAACATCTCCTGGATCAAATCCAACAAACTACACCATGCGCAATGTTCCAGAGAGGCCATACAAGTGTAACTACTGCCCCAGTTCAACGTTCTCGACGCAGAGCAATCTGAAGAAACATGTCCAGACCAAGCACAACCCACAGAGTCCAGGTTCAGCCAATCACATGCCTGTATCCAGGTTGTGCATGACGTCGACGGAGGATAGTGGAGTTCTGAGTTCAGCAAGCAGCCAGCATGGCGGGGAGGAAGGTCACGCAAGTGCAAGCGAGGACATGGTAGAGGATAAAGTGAGTTTGCTGCACAGAACTCTGGAACATGATCAGGACAGTGCAAGAGAACATGATAAAGGAGAAAGAAGCCCATACAAGATACCTGCAGGACCTCCTAATGTCGACGTCCTCAAATGTGCACTAGCCAGTGTTCCAGAGCCTGTATTGTTAGCAACAAAGCAGATGCCTGTTACGTCACTGCCAACACCGGAGGTCCCTCCTGTAGGTGGCAGCACATCTTCAGCAGACCTGCCATTCAAGTGTCATCTGTGCGAGGGAAGCTATGCTGAGAGGCAGGAGGCCCTGAATCACATCCGCGACAGTCATCCATCTGAGTATGACCTACTCATGTCCAAGGGGGCGCTGGACTCTGCTACTGGGGCAGAAGATAACAACAATGTAAGTGCCTCTTCTGGCAGCGGACATGCAGACGACGGTGCTGGAGAAGAGAGTCTTGAGGTTCTCCGAGGGAAATTCCCAGATTATGCAAATAGGAAGGTTATGTGTGCATTTTGCATGAGGCGGTTTTGGTCAGCGGAAGATTTACGCCGACACATGAGAACACACACTGGGGAACGTCCTTTTTCGTGTGACATTTGCAGACGTCGCTTTACCCTCAAACACAGCATGCTGCGACATCGTAAAAAGCACATCAACGATACTGCTGGGTACAATTCTACAACTGCCTGTCCAGAGGATGTATCACTAACCAGCGGCGATGAAGAACACGGTCCAGTGATCCAGCAACGAACCAAGAAACCTCAGGTTCCTGCGATGGAAGAAGTTCCTGGTGCAAGTGCAGACAAAGACATTGCTGCAGAAGTTCCTTCAGTGAAGCCTGTAAAAATATCAATCAAAATGAcaaatcacaataacaataacattaccgCTGCTTCTACCAAAGGTGTAAATAGTTGGGATGGTGAGAGTGAAGATTTCGCTACGTCAGCAGCTGCAAAGATTTTAAGTTCAAAGTTTTCTTCTATTGCAATAAAAAAGGATGACAACGAAGAGGAAACCGATCTCATTGGAAAGCTACTGGGTATTCAGGATAGGTCCATAATCGATAAGGTTTTACAAACCAAGTCCGCAGATGATGCTGCAAAGTTATTGGGTGTACAAAATGGTGGAAATCAGGAATAA
Protein Sequence
MQDMATMQQHSITSPAPASTIQGSSADSLASTSCNADIHHETSRTDAESYVVKSEPEPAHNEDDEHATKQTELDDENNDVSRLNSSSTDTEGEAKMESFSSDSHSEDTDETRYACPICDTIMPSQHDLTLHIRSHNNDDGKLSPLTCTKAYTCKICSKVLSSSSSLDRHVLVHSGERPFKCRICGVAFTTNGNMHRHMRTHNTTKNDQSYESDGSTDSGGSFKRSPQLSPPNSAKKRRVGPHTSPTESTCSSKPSESPPSSTQSPSSTEGAHKRKAADFLTESGVCNERRRIKPSTAEDHTEATFVQNLRCPACNKDHFTSLQNLETHLEETHPHYHRRCQFCDLVFKNHAALNRHLFMTHHNKGNKSPNKNSQRTSTVFGFDDLTKWEFSSKKFPHIARIVCEQNIHKASSDTHFQCNKCERAFPCASALNIHQKNYHSRSDSGNDIAESHSDSDAPTDLSCPRKRPPATETACESEEEFEERKRESFFAVLDLQNKSSPSSPPSSERREDLTDDSMYFSPAGKAMDGTKDLADIQSIISVASAGGLIQDLSKSPPQNGQCGSDLLSPDSGVRSSISMMDSGAGEEEQQDCFAAEFRRMKLKGEFPCRLCTAIFPNLRALKGHNRQHLCVGVGPFRCNMCPYTNADKSTLVRHMRTHNGDRPYECKICKYAFTTKANCERHLRNRHSKLSREDVKNSIIYHPSEDPTNDPDFTGKLQIALQSREEVKRSLVFGNHSPSIEEVSKSENSINYHYSLDESAKDSYVEKEPVKTMRVHEETEQFVTRNSVSSETQTPPHTSISPLIFRAQQRVVTNIKQIRPWETQEAATMTTIEDEDGSEDRNMHHETENTEILVNFTKSGNSYNKLQDQRLPLVDISCRTPPSSSYSSPLRETNSPLDLTVDVLDLSTKKETTKESDDDDNDDEHEVPQDLSNKSAVNKVEYNNTRYGPMKFMPKSDNFQKASTAAQPISVNQHLFTRGTMSPHQQSPSTTPTTIPKLDINTAGFYASPLNPLYNINNNGFPFSQSQTTFPLHPYVMYPHALFSNTNVDDIRTRLQKELINSLQLSGGTLLDPMVIAASATDRLQALHQKAYEEYSRHKVDAKLPYTDTQVDDGRKSVSLPVKDPEKTTPVTSIGSTSPVIKVSPASKPPRDRDNSSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWTQRQRNNIGNTGPGRRSHIPPSLTVPSPTQIRKPPESDNLTAQTKSTEVAPLPTIINIPEPPKDFQISNLIRNNFSSDANSEAHIIIPKTKDELTSSTLLAESVKTKDNSSIINNNNNYNKPFISDEVKLAIAQQLKSKLIATISDSEEKDITGREAKKDDDDDENELVIDEEKDAEEATEDKQVKEESKDNNEGTSNNSVGKDVDLASVSRLLDNATTQTKAFQHYFRGTQDGEDALEGSEEDEEGLVAGSNSEGNNSGSDENRSECELGTANTKNIAGEKKKSAYSLAPNRVACPYCFRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGGQSASSSSQGTSAGNTSSSSETSPGSNPTNYTMRNVPERPYKCNYCPSSTFSTQSNLKKHVQTKHNPQSPGSANHMPVSRLCMTSTEDSGVLSSASSQHGGEEGHASASEDMVEDKVSLLHRTLEHDQDSAREHDKGERSPYKIPAGPPNVDVLKCALASVPEPVLLATKQMPVTSLPTPEVPPVGGSTSSADLPFKCHLCEGSYAERQEALNHIRDSHPSEYDLLMSKGALDSATGAEDNNNVSASSGSGHADDGAGEESLEVLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHINDTAGYNSTTACPEDVSLTSGDEEHGPVIQQRTKKPQVPAMEEVPGASADKDIAAEVPSVKPVKISIKMTNHNNNNITAASTKGVNSWDGESEDFATSAAAKILSSKFSSIAIKKDDNEEETDLIGKLLGIQDRSIIDKVLQTKSADDAAKLLGVQNGGNQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00955811;
80% Identity
-