Mrel088896.1
Basic Information
- Insect
- Mantis religiosa
- Gene Symbol
- RREB1_1
- Assembly
- GCA_030765055.1
- Location
- JAUKNK010000320.1:1506926-1520396[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00074 0.33 13.8 0.3 1 23 90 112 90 112 0.98 2 16 3.8e-05 0.017 17.8 0.3 1 23 128 150 128 150 0.98 3 16 7.4e-07 0.00033 23.2 2.2 1 23 156 178 156 178 0.99 4 16 0.76 3.4e+02 4.3 0.7 2 23 287 310 286 310 0.86 5 16 0.0018 0.79 12.6 3.5 2 23 316 338 315 339 0.94 6 16 0.0035 1.6 11.7 1.5 1 23 393 416 393 416 0.97 7 16 0.15 68 6.5 0.2 1 23 580 602 580 602 0.97 8 16 8.8e-05 0.039 16.7 0.9 1 23 610 632 610 632 0.99 9 16 0.00043 0.19 14.5 3.7 1 23 638 661 638 661 0.97 10 16 0.00081 0.36 13.7 2.1 1 23 1158 1181 1158 1181 0.95 11 16 0.0013 0.59 13.0 0.4 3 23 1477 1497 1476 1497 0.98 12 16 0.016 7.3 9.6 5.1 1 23 1503 1526 1503 1526 0.97 13 16 0.00012 0.052 16.3 2.6 1 23 1568 1592 1568 1592 0.98 14 16 0.45 2e+02 5.0 0.5 1 23 1716 1739 1716 1739 0.95 15 16 0.016 7.2 9.6 0.5 3 23 1799 1819 1797 1819 0.93 16 16 0.0074 3.3 10.6 5.9 1 23 1825 1847 1825 1847 0.98
Sequence Information
- Coding Sequence
- ATGCAGCGGGTTGTAAACAAGACACGGTATGACGTGCAGTGTTTTGTTTCAGGGTCCTCTGCGGACTCCTTGGCGAGCACCAGCTGTAATGCTGAGGTCCACCATGAAACATCACGAACTGACGCTGACAGTTACCTGGAAGACgagcaaacaacgaaacaaactGAAAACAACGAAGTGTCAAGACTGAATTGCTCCACCGACACGGAAGGGGAAGCGAAGATCGAGACGGACAGTCACAGCGGCGACGATGCCGATGAGACGAGGTATGCTTGTCCGATCTGCGAGACCATCATGTCCTCGCAGCACGATCTCACTCTCCACATCCGCTCGCACAACAACGACGACGGCAAACTGTCGCCTCTCACGTGCACCAAGGCCTACACGTGCAAGATCTGCAGCAAGGTGCTAAGTTCCTCGAGTTCCTTGGACAGGCATGTGTTGGTCCACTCTGGGGAGAGGCCCTTCAAGTGTCGCATCTGTGGCGTGGCCTTCACCACCAACGGCAACATGCACAGACACATGAGGACCCACAACACTGCCAAGAACGATCAATCTTACGAGAGTGATGGCAGCACTGACAGTGGCGGGTCCTTCAAGAGAAGTCCTCAACTGTCACCGCCAAACTCAGCCAAGAAGAGAAGAGTTGGACCTCATACATCTCCCACAGAGTCCACTTGCAGCAGCAAGCCTTCAGAGTCACCACCTTCCAGCACGCAGTCACCAAGCTCCAGCGAGGGCACTCACAAAAGGAAGGCTTCAGACTTCCTTACAGAATCAGGTGGCTGCAACGAAAGGAGGAGAATCAAACCAAGCACAGCTGAAGATCATACTGAAGCAACATTTGTACAAAACCTTCGCTGTCCTGTATGCAACAAAGATGACTTCACCTCCCTTCAACATCTGGAAACACATTTGGAGGAGACTCATCCACAATATCACCTGCGGTGCCAATTCTGTGacttggttttcaaaactcatgCAGCACTAAACCGCCATCTATTCATGACTCACCATAACAAAGGTAACAAATCTCCCAGTAAGAATTCACAACGAACTTCAACCGTGTTTGGTTTTGATGATTTGACAAAATGGGAGTTCTCGAGTAAGAAattccctcacattgcaagaatAGTCTGTGAACAGAACATTCATAAAGCATCTAGTGATACCCACTTTCAGTGCAATAAATGTGAAAGGGCATTCCCATGTGCTAGTGCCTTAAACATACACCAGAAGAACTATCACGGTCGCAGTGACTCTGGCGATGATATGACAGAGTCTCATAGCGACAGTGATGCCCCTACTGACCTCAGCTGTCCAAGAAAACGACCTTCTGTTACTGAAACTGCTTGTGAATCTGAAGAGGAGTTCGAAGAACGAAAGAGAGACAGTTTCTTTGCTGTTCTTGATCTGCAGAACAAATCTTCTCCATCATCACCACCCTCATCAGAGAGGAGGGAAGATCTCACAGATGATAGCATGTACTTCAGTCCTGCAGGTAAAGCTATGGATGGAACAAAAGACTTGGCAGACATTCAGAGCATTATATCTGTAGCATCCGCAGGAGGTCTTATCCAAGACTTGTCAAAATCACCACCTCAGAATGGAAGTGACTTGCTATCAACTGATAGTGGCATCAGAAACAACATTGGCGTGATAGATACTGGTGCTGGAGAAGAAGAGCAACAAGACTGTTTTGCAGCAGAATTCAGGCGTATGAAGCTAAAGGGGGAATTTCCCTGCAGACTTTGTACAGCAATATTCCCAAACCTTCGAGCACTGAAGGGACATAATCGCCAACATCTCTGTGTTGGTATTGGGCCTTTCAGATGTAACATGTGTCCATACACCAAcccagataaatcaactctagtTAGACATATGCGAACACACAATGGTGACCGTCCTTACgagtgcaaaatttgtaaatatgcatTCACAACAAAGGCAAACTGTGAGAGACATTTGAGAAACAGGCACTCCAAACTTTCCAGAGAAGATGTGAAGAACTCAATAATATATCATCCTTCAGAAGACCCAACAAATGATCCTGATTTCACAGGAAAGTTACAGATAGCGCTGCAGTCTCGAGAAGAAGTCAAAAGGTCCTTAGTCTTTGGTAACCACAGTCCCTCTGTAGAGGAAGTAAGCAAGTCTGAAAACTCCAATTATCATTATTCACTGGATGAAAGTGCAAAAGATTCTTGTGTTGAAAAAGAACCAGTGAAAACAATGAGAGTTCATGAAGAAACAGAACATTTTGTCACAAGAAATTCAGTTTCAAGCGAGACACAAACTCCTCCCCATACAAGCATCTCACCACTCCTCTTCAGAGCTCAACAACGAGTTGTCACAAATGTAAAACAAGTCCGTCCATGGGAAACACAAGAAGCTGCAACAATGACAACCATCGAAGATGAAGATGGTAGTGAGGATAGAAACATACATCTTGAAACTGAAAACACTGAAGTCCTAGTCAATTTTACCAAAAGTAGTAACTCCTATAATAAGCTGCAAGACCAAAGATTACCCTTAGTGGACATTTCTTGTAGAACTCCCCCCTCGAGCTCTTACTCCTCACCTTTGAGAGAAACAAACTCTCCACTGGATCTCACAGTAGATGTCCTAGATTTAagcacaaagaaagaaacaaccaaagaatctgatgatgatgacgataatgatgatgagcaTGAAGTGCCTCAAGATTTATCAAACAAGTCCGCAGCAAATAAAGTTGAGTACAACAACAATACGAGATATGTGCCGATGAAGTTCATGCCAAAGTCGGATAACTTCCAGAAATCTAGCTCTGCAGCTCACCCCATTAATGTAAGCCAACATTTGTTCACCAGAAATACGATGTCCCCACATCAGCACCAAAGTCCCAGTACAACGCCTACAACAATACCAAAGTTAGACATAAACACTGCAGGGTTCTACGCTTCTCCTCTTAACCCTCTgtacaacatcaacaacaatgGCTTTCCATTCTCACAGTCTCAGACTACATTTCCATTACATCCGTATGTGATGTACCCACATGCACTGTTCTCTAACACCAATGTAGATGATTTCAGAACACGTCTGCAGAAAGAACTTATAAACAGCCTGCAGCTTTCTGGTGGTACATTGCTTGACCCGATGGTGATAGCAGCATCTGCGAAAGACAGACTTCAAGCACTTCATCAAAAAGCTTACGAAGAGTACTCCAGACACAACGCCGACGCAAAGTTACCATATACTGACACTCAAGTAGAAGATGGAAGAACATCTGTTTCTCTTCCTGTAAAAGATCCAGAGAGGAACACTCCTGTAACAAGCATCGGCAGCACATCGCCAGTGATCAAAGTATCCCCAGCATCAAAACCACCAAGGGATCGTGATAACTCATCAGTTAAAATGGTGATAAAAAATGGCGTCCTAATGCCAAAACAAAAGCAGAGACGATACAGAACTGAACGCCCTTTTGCTTGTGAGCACTGCTCAGCAAGGTTTACCTTGCGCTCAAATATGGAACGCCACATCAAGCAGCAGCACCCTCAGTTCTGGACTCAGAGACAGAGGAACAATATTGGCAACACTGGACCTGGTCGACGTAGCCATATACCTCCTAGTTTAACAGTTCCATCTCCAACACAGGTTAGAAAACCTTCAGAATCAGAGAACCTCACTGCTCAAACTAAGGGTTCTGAAGTTGCTCCATTACCTACAATTATAAACATTCCTGAACCTCCAAAAGACTTCCAGATCTCTAATCTGATACGTAACAACTTCAGCAGTGATGCCAATATAATTATACCAAAGACAAAAGATGAACTCGCTAGCAGCAATCTGTTGGCTGAAAGTGTTAAAACCAAAGATAACTCTAGtattataaacaataataataattataacaaagcCTTCATTTCTGATGAAGTCAAATTAGCAATTGCTCAGCAGCTCAAATCAAAACTTATAGCCACAATATCTGACAACGAAGAAAAGGATGTCACTCTCAGGGAGGCAAAGaaagatgatgacgacgatgaaaGCGAGCTAGTAATCGATGAAGAAAAGGATGCTGAAGATGCCATAGaagacaaacaaataaaagaggacAGTAAAGATAACAACGAAGGAACTAACAGCAATAGCGGAGGGAAGGATGTGGATCTCGCAAGTGTGTCGAGACTGCTAGACAATGCTACAACTCAGACAAAAGCTTTCCAACATTACTTCCGAGGTACACAAGATGGAGAAGATGTCCTGGAGGGAAGCGAGGAAGATGAGGAAGGACTTGTGGCAGGCAGTAATAGTGAAGGGAACAACTCGGGCAGTGACGAGAACAGGTCTGAATGTGAACTTGGAACTGCTAATACGAAGAACACTTCAGGAGAAAAGAAGAAGAGTGCCTACTCGCTGGCACCTAACCGTGTGGCCTGTCCTTACTGCTTCCGCAAGTTCCCTTGGTCATCGTCGCTGAGACGTCACGTTCTCACTCACACTGGACAGAAGCCCTACAAGTGCCCACACTGTCCGCTGCTCTTTACCACAAAGTCAAACTGTGATCGTCACCTCCTTCGCAAACATGGTGGACAGTCAACCTCGTCGAGTTCCCAAGGAACAAGCACAGGCAATACATCGTCCAGTTCTGAAACATCTCCTGGATCAAATCCAGCAAACTACACCATGCGGAACGTTCCGGagagaccatacaagtgtaactaCTGTCCCAGCTCGACATTCTCAACGCAGAGCAACCTTAAGAAGCACGTTCAAACCAAGCACAACCCGCAGAGTCCTGGTTCAGCCAATCACATGCCTGCATCCAGGTTGTGCATCACCTCAGCAGAGGATAGTGGTGTTTTGAGTTCAGCAAGCAGCCAACATGGCGGTGAGGAAGGTCATGCAAGTGCAGGCGAGGATATTGTAGAGGAGAAAGTAAGTGTGGAGCATGATCAGGATACTTCCAGAGAACGTGAGAAAGGAAGCCCATACAAAATACCTGCAGGACCTCCTAATGTCGACAGCCTCAAATGTGCACTAGCCAGTGTTCCAGAGCCTGTATTGCTAGCAACAAAGCAAATACCAGTTACATCACTGCCGACACCAGAGGTCCCtcctgtaggtggcagcacatCCTCTGCAGACCTGCCATTCAAGTGTCATCTTTGTGAGGGAAGCTACGCCGAGAGGCAGGAAGCTTTAAATCACATCCGTGACAGTCATCCGTCCGAGTACGAACTTCTCATGTCCAAAGGGGCATTGGATTCTGCTACTGGAGCAGAAGATAACAACAGTGTGAGTGCCTCCTCTGGTGGTGGACATGCAGACGATGGTGCTGGCGAAGAAAGTCTTGAAGTTCTCCGAGGGAAATTTCCGGATTATGCAAATAGGAAGGTTATGTGTGCATTTTGCATGAGGCGGTTTTGGTCAGCAGAAGATTTACGCCGACACATGAGAACACATACTGGGGAACGTCCTTTCTCATGTGACATCTGCAGACGTCGCTTTACTCTCAAACACAGTATGTTGCGACATCGTAAAAAGCACATCAATGATACTGCTGGATATAATTCTACAACCGCCTGTCCAGAAGATGTATCGTTAACCAGTGGCGATGAAGAACATGGTCCAGTGATTCAACAACGAACCAAAAAACCTCAGGTTCCAGCGATGGAAGAAGTTCCTGGTGCAAGTGTAGACAAAGACATTGCTGCAGAAGTTCCTTCAGTGAAGCCTGTAAAAATATCAATCAAAATGAcaaatcacaataataataacattactgCTGCTTCTACCAAAGGTGTAAATAGTTGGGGTGGTGAAAGTGAAGAGTTCGCTACTGCAGCAGCTGCAAAGATTTTAAGTTCAAAGTTTTCTTCTATTGCAATAAGAAAGGATGACAACGAAGAGGAAACGGATCTCATTGGAAAGTTACTGGGTAttcaggataggtccataattgATAAAGTTCTACAAACCAAGTCTGCAGATGATGCTGCAAAATTATTGGGTGTACAAAACGGTGGGAACCAGGAATAA
- Protein Sequence
- MQRVVNKTRYDVQCFVSGSSADSLASTSCNAEVHHETSRTDADSYLEDEQTTKQTENNEVSRLNCSTDTEGEAKIETDSHSGDDADETRYACPICETIMSSQHDLTLHIRSHNNDDGKLSPLTCTKAYTCKICSKVLSSSSSLDRHVLVHSGERPFKCRICGVAFTTNGNMHRHMRTHNTAKNDQSYESDGSTDSGGSFKRSPQLSPPNSAKKRRVGPHTSPTESTCSSKPSESPPSSTQSPSSSEGTHKRKASDFLTESGGCNERRRIKPSTAEDHTEATFVQNLRCPVCNKDDFTSLQHLETHLEETHPQYHLRCQFCDLVFKTHAALNRHLFMTHHNKGNKSPSKNSQRTSTVFGFDDLTKWEFSSKKFPHIARIVCEQNIHKASSDTHFQCNKCERAFPCASALNIHQKNYHGRSDSGDDMTESHSDSDAPTDLSCPRKRPSVTETACESEEEFEERKRDSFFAVLDLQNKSSPSSPPSSERREDLTDDSMYFSPAGKAMDGTKDLADIQSIISVASAGGLIQDLSKSPPQNGSDLLSTDSGIRNNIGVIDTGAGEEEQQDCFAAEFRRMKLKGEFPCRLCTAIFPNLRALKGHNRQHLCVGIGPFRCNMCPYTNPDKSTLVRHMRTHNGDRPYECKICKYAFTTKANCERHLRNRHSKLSREDVKNSIIYHPSEDPTNDPDFTGKLQIALQSREEVKRSLVFGNHSPSVEEVSKSENSNYHYSLDESAKDSCVEKEPVKTMRVHEETEHFVTRNSVSSETQTPPHTSISPLLFRAQQRVVTNVKQVRPWETQEAATMTTIEDEDGSEDRNIHLETENTEVLVNFTKSSNSYNKLQDQRLPLVDISCRTPPSSSYSSPLRETNSPLDLTVDVLDLSTKKETTKESDDDDDNDDEHEVPQDLSNKSAANKVEYNNNTRYVPMKFMPKSDNFQKSSSAAHPINVSQHLFTRNTMSPHQHQSPSTTPTTIPKLDINTAGFYASPLNPLYNINNNGFPFSQSQTTFPLHPYVMYPHALFSNTNVDDFRTRLQKELINSLQLSGGTLLDPMVIAASAKDRLQALHQKAYEEYSRHNADAKLPYTDTQVEDGRTSVSLPVKDPERNTPVTSIGSTSPVIKVSPASKPPRDRDNSSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQFWTQRQRNNIGNTGPGRRSHIPPSLTVPSPTQVRKPSESENLTAQTKGSEVAPLPTIINIPEPPKDFQISNLIRNNFSSDANIIIPKTKDELASSNLLAESVKTKDNSSIINNNNNYNKAFISDEVKLAIAQQLKSKLIATISDNEEKDVTLREAKKDDDDDESELVIDEEKDAEDAIEDKQIKEDSKDNNEGTNSNSGGKDVDLASVSRLLDNATTQTKAFQHYFRGTQDGEDVLEGSEEDEEGLVAGSNSEGNNSGSDENRSECELGTANTKNTSGEKKKSAYSLAPNRVACPYCFRKFPWSSSLRRHVLTHTGQKPYKCPHCPLLFTTKSNCDRHLLRKHGGQSTSSSSQGTSTGNTSSSSETSPGSNPANYTMRNVPERPYKCNYCPSSTFSTQSNLKKHVQTKHNPQSPGSANHMPASRLCITSAEDSGVLSSASSQHGGEEGHASAGEDIVEEKVSVEHDQDTSREREKGSPYKIPAGPPNVDSLKCALASVPEPVLLATKQIPVTSLPTPEVPPVGGSTSSADLPFKCHLCEGSYAERQEALNHIRDSHPSEYELLMSKGALDSATGAEDNNSVSASSGGGHADDGAGEESLEVLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHINDTAGYNSTTACPEDVSLTSGDEEHGPVIQQRTKKPQVPAMEEVPGASVDKDIAAEVPSVKPVKISIKMTNHNNNNITAASTKGVNSWGGESEEFATAAAAKILSSKFSSIAIRKDDNEEETDLIGKLLGIQDRSIIDKVLQTKSADDAAKLLGVQNGGNQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00435022; iTF_01410966; iTF_00821232;
- 90% Identity
- iTF_01410966;
- 80% Identity
- -