Basic Information

Insect: Tenodera sinensis
Gene Symbol: -
Assembly: GCA_030765045.1
Location: CM060964.1:301822340-301824673[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00018 0.07 15.9 0.1 1 23 268 290 268 290 0.95

2 12 1.9e-05 0.0076 18.9 1.3 1 23 298 320 298 320 0.99

3 12 0.0009 0.36 13.6 0.1 3 23 329 349 327 349 0.95

4 12 3.9e-06 0.0016 21.1 0.2 1 23 355 377 355 377 0.98

5 12 2e-05 0.008 18.8 2.5 1 23 384 406 384 406 0.98

6 12 5e-05 0.02 17.6 0.1 1 23 412 434 412 434 0.91

7 12 6.4e-06 0.0026 20.4 0.3 1 23 440 462 440 462 0.99

8 12 1e-06 0.0004 22.9 0.7 1 23 468 491 468 491 0.96

9 12 2.3e-05 0.0092 18.6 0.8 1 23 497 520 497 520 0.96

10 12 8.6e-06 0.0034 20.0 4.0 1 23 526 548 526 548 0.99

11 12 4.5e-05 0.018 17.7 1.9 1 23 554 576 554 576 0.96

12 12 3.6e-05 0.014 18.0 0.2 1 23 582 606 582 606 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00018	0.07	15.9	0.1	1	23	268	290	268	290	0.95
2	12	1.9e-05	0.0076	18.9	1.3	1	23	298	320	298	320	0.99
3	12	0.0009	0.36	13.6	0.1	3	23	329	349	327	349	0.95
4	12	3.9e-06	0.0016	21.1	0.2	1	23	355	377	355	377	0.98
5	12	2e-05	0.008	18.8	2.5	1	23	384	406	384	406	0.98
6	12	5e-05	0.02	17.6	0.1	1	23	412	434	412	434	0.91
7	12	6.4e-06	0.0026	20.4	0.3	1	23	440	462	440	462	0.99
8	12	1e-06	0.0004	22.9	0.7	1	23	468	491	468	491	0.96
9	12	2.3e-05	0.0092	18.6	0.8	1	23	497	520	497	520	0.96
10	12	8.6e-06	0.0034	20.0	4.0	1	23	526	548	526	548	0.99
11	12	4.5e-05	0.018	17.7	1.9	1	23	554	576	554	576	0.96
12	12	3.6e-05	0.014	18.0	0.2	1	23	582	606	582	606	0.94

Sequence Information

Coding Sequence: ATGTCTCCAGATATAGAGAAGGAACAGGTTACTGCTCCCAAAAACACCCATTGTCTTATATGCAATAGTCAAGTGGCCGTCTCGACGAGAAACTGCTTTGAAATTTTCCATAAGGACCTTACAACAGCTACGTCAGAGCGTCCTTTGTCGCTTACAATTGGGGCAGTTCTTGGACTAGAGATAAGAGAAGATACTGTACACAGCAATGTTATCTgcaaaaagtgtttaaagttGATCAATGAAGTGGATGAGATagaaaccagattaaaagaactcCGAGTAAAAATTAACTCCAACTATCAACGAACTATTAAACTACAGACTGAAGGTGGGAAAGACTCGCCCCTTCcaaatgaagatggagaacccAAGCTCTCGCTTGGTGCAGACGATGAGAAGGTCAAGAAACATTTCCTTGAAGGAGTGCGTAAGGAAAGTATACCAGAGAAAACGGAATCATCTCACAGTGCTGAAGACAAGCAAAAGGAAATTACCGTTTGTGTAATTCATCTGAAAGAACAAAATAGCGGTGCTCATTTTAGTGAAATGATCCTCGGTAATGATGATACAGAGAACATAGCAGGTCAaggaaatgtgaaaataaatttggAACCAGATGATGGAGACAGCAGAAGAATGATCGGAAGCAAGAGAATGGAAATGGAGTCGCAGACACCAGAAAAAATTGTTGCTAGGGAAGGAGTAGGTTTTCTATGTTTGTTGTGCAATGGGGGTGAAAAAACTGTAGGAGATATGAAAGGAATAGTTGGCCATTTGAAGGGTGTTCATAATGTTCGCATCTACATCTGCGATGTTTGTGGACAGGGCTTtagaaaaagaaatgaattatcTGCACATCTGGATGATCATGCTACAACAGAAGAGGGGTGTTACCAATGTGAAGTGTGCAGTCGCATCTTCAGTAATCTCAGACTATTCCGTGTACACAGGCGTATGCATAATCAACAATCAAAACTGTGGATCTGTGAGGCTTGTGGCAAACGGTACAACTCTCGCAATCTCCTCTATGAACACATCAATATACACACTGGAGTACGACCATATGTATGTGAGGCATGTGGGAAAGAGTTTGCCTCCAAATACACGTTAAAGGCCCATACAAAGATCCACGAAGTACGTCCACGACCATACTGTTGCAATGAGTGTGGCAAAACATTCTTGACCTCAAATAACCTAGCACAACACGAGCGAACACATATAAACATGCGTAACTATCTATGTGACCAATGTGGTAAGGCATTTTCCACTGCACGCAGCTTGGAGGTGCATAGCGTCGTGCATTCGGACTATAAACCATTCACATGCCGGATATGTGGCAAAGGTTTTGCTCGCAAAGCAGAGATCAAGGATCACGAACGTACCCATACTGGAGAGAAGCCCTACCAGTGTGAGTTTTGTGGTGCCGCATTCAGTCAACGCAGCAATTTGCAGTCCCACAAGCGTGCTACCCACTACCAGGACAAACGTTTCAAGTGTGAGAACTGTGGCAAAGGATTCAAGCGACGACGTCTTCTAGACTACCATTTGAAAGCTGCTCACACTGGTGAGCGTCCATACAAATGTCCAACTTGTGATGCCACATTTGTATATCCAGAGCACTTCAAGAAGCATCATCGTATACATACAGGAGAGAAGCCATTTTGCTGTGAGGTATGTGGTAAAGCATTCAGTAGCAGAGACAACAGAAATGCTCACAGATTTGTACACATCGACAAGAAAGCGTATGAGTGCTTGGTGTGTGGCATGGGATTCATGCGCAAGGCACTGCTATACAACCATATGCGCACACAGGGTCACATTAATGACACCATTGTTGTAAACCGGTCTCATGTAGCAACAGATGAAGATCTTGCTGCAGAGGCTGCTGCTGAAGCAGTCGAAGTACAGTTGACTACTGTTGGTGAAGATCCCACTCCAGACCAAGAAATGAAACTCTGCATAGCTGGATTGAAGGATCATGTCATCATCCGGAATGATGGTGATGACCGAGTTTATGCAGAGAGAACAGCGGTGGTGGGTAGTGATGATTTTGAACTTAAAGACGGGGAGCAACATATAACGGAAGAAGCTGTGGAGCATCTCATTATAGGTCAACTCCATTTTGCTAACCCCAATGAGCTTGCACACATGCATGCAGATATGGGATGTGGAGCAGAAATAACAGTGACCACATCTAATTTTGTGAGGAGTGACGAAGGTCGATGTGCACTTGTGGTTTCTGCAACTCCACATGTGTTGTCTTCTTCAACAGAGGCATTTGAAGGGAGTCAAGTGGTGGATCAGGAAACGGGCAGAGAAGAGATTGAACAGTGA
Protein Sequence: MSPDIEKEQVTAPKNTHCLICNSQVAVSTRNCFEIFHKDLTTATSERPLSLTIGAVLGLEIREDTVHSNVICKKCLKLINEVDEIETRLKELRVKINSNYQRTIKLQTEGGKDSPLPNEDGEPKLSLGADDEKVKKHFLEGVRKESIPEKTESSHSAEDKQKEITVCVIHLKEQNSGAHFSEMILGNDDTENIAGQGNVKINLEPDDGDSRRMIGSKRMEMESQTPEKIVAREGVGFLCLLCNGGEKTVGDMKGIVGHLKGVHNVRIYICDVCGQGFRKRNELSAHLDDHATTEEGCYQCEVCSRIFSNLRLFRVHRRMHNQQSKLWICEACGKRYNSRNLLYEHINIHTGVRPYVCEACGKEFASKYTLKAHTKIHEVRPRPYCCNECGKTFLTSNNLAQHERTHINMRNYLCDQCGKAFSTARSLEVHSVVHSDYKPFTCRICGKGFARKAEIKDHERTHTGEKPYQCEFCGAAFSQRSNLQSHKRATHYQDKRFKCENCGKGFKRRRLLDYHLKAAHTGERPYKCPTCDATFVYPEHFKKHHRIHTGEKPFCCEVCGKAFSSRDNRNAHRFVHIDKKAYECLVCGMGFMRKALLYNHMRTQGHINDTIVVNRSHVATDEDLAAEAAAEAVEVQLTTVGEDPTPDQEMKLCIAGLKDHVIIRNDGDDRVYAERTAVVGSDDFELKDGEQHITEEAVEHLIIGQLHFANPNELAHMHADMGCGAEITVTTSNFVRSDEGRCALVVSATPHVLSSSTEAFEGSQVVDQETGREEIEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00434996;
90% Identity: -
80% Identity: -