Tsin079724.1
Basic Information
- Insect
- Tenodera sinensis
- Gene Symbol
- -
- Assembly
- GCA_030765045.1
- Location
- CM060973.1:36264135-36264926[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.0034 1e+02 4.8 0.3 8 25 9 26 3 37 0.53 2 20 0.0059 1.8e+02 4.0 0.1 4 24 27 47 25 49 0.72 3 20 0.0037 1.1e+02 4.6 0.1 4 25 38 59 35 62 0.79 4 20 0.017 5.3e+02 2.5 0.0 4 20 49 65 46 70 0.75 5 20 0.026 7.9e+02 1.9 0.1 6 23 62 79 56 81 0.57 6 20 0.0063 1.9e+02 3.9 0.1 4 23 71 90 68 92 0.74 7 20 0.0062 1.9e+02 3.9 0.1 4 23 82 101 79 103 0.74 8 20 0.0056 1.7e+02 4.1 0.1 4 24 93 113 90 115 0.74 9 20 0.0098 3e+02 3.3 0.0 4 21 104 121 102 126 0.76 10 20 0.017 5.3e+02 2.5 0.0 6 24 117 135 112 137 0.57 11 20 0.0063 1.9e+02 3.9 0.1 4 23 126 145 123 147 0.74 12 20 0.0067 2.1e+02 3.8 0.1 4 23 137 156 135 158 0.73 13 20 0.0056 1.7e+02 4.1 0.1 4 24 148 168 145 170 0.74 14 20 0.0052 1.6e+02 4.2 0.0 4 25 159 180 156 182 0.74 15 20 0.0067 2.1e+02 3.8 0.1 4 23 170 189 168 191 0.73 16 20 0.011 3.3e+02 3.2 0.0 4 21 181 198 179 202 0.76 17 20 0.02 6.2e+02 2.3 0.1 5 23 193 211 188 213 0.61 18 20 0.0052 1.6e+02 4.2 0.0 4 25 203 224 200 226 0.74 19 20 0.004 1.2e+02 4.5 0.1 4 25 214 235 212 238 0.78 20 20 0.024 7.4e+02 2.0 0.0 4 16 247 259 245 262 0.82
Sequence Information
- Coding Sequence
- ATGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGAGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGATGCACAGCGCCGTGTTACTATGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATATGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTATGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATATGGTGCACAGCGCCGTGTTACTATGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATACGATGCACAGCGCCGTGTTACTATGCAACAATACGGTGCACAGCGCCGTGTTACTGTGCAACAATATGGTGCACACCGCCTTCCTTAG
- Protein Sequence
- MQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYDAQRRVTMQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTMQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTMQQYGAQRRVTVQQYGAQRRVTVQQYGAQRRVTVQQYDAQRRVTMQQYGAQRRVTVQQYGAHRLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -