Tsin051832.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tenodera sinensis
Gene Symbol
Mblk-1
Assembly
GCA_030765045.1
Location
CM060966.1:117339599-117342538[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-17 6.3e-14 53.7 0.1 1 44 11 55 11 56 0.94
2 2 7.5e-18 1.3e-14 55.9 0.0 1 43 536 579 536 581 0.95

Sequence Information

Coding Sequence
ATGAGTACGGTGGCCGGTCGCAGGACATACACGGAGGAAGAACTGCAAGCAGCTCTTCGGGATATCCAGAGCGGTAAACTGGGAACAAGACGTGCTGCTGTAATCTATGGGATTCCTCGATCCACACTTCGCAACAAAGTCTACAAACTGGCTCTTGAACGTGAGCGAGATTCTCATTTGGTCATCGGCAACAATACTTCTGCACCTGTAACATTGGTAAATGTGTCAGATAAATCCCTTGAGCCAGACCTTATATCCAAAGTTGAAGATGCCGTTCCGGAAGATGATGAGAAGGAGCTTTCTGGAGCAGAGGAGGAGCGAGAGGTGGAGAAAGCCTTGCAGAAGCCTTTGCTGTCCATGGAAGATCTTGTGAGATTCTCAGTCCTTGATGCAGGAAAAGGGATTGGATCTCTTCTTCAACAGGGGCGAGCTTTGGAAGATGGACTCCGCAAACATAGTGTCAGTGGTGAGGAAGGTGAAACTTGTACTTCCCCTCCAGTTTTTCCTGGTTTTCCACAAAACATTACAGATATTTGGAACGGTATGGAACACAGTGCTCTTGGTCCATATGTGTCTCAGCTTCTTGCCACTGGTATCATTGGAAGTAAAAATCCTGGCGGAGGGACTCTTGAAGACAGGAACACAGGCAGTGCTACAGCTGGTGATTTCCTTCCAAAATTTCCTTCTCCTCTCCTACCTGAGTTTGTTCATAGGATGATAGAAGAGGAAAAGATTTTAATTGGTGAACAGTTGAAAAAACAGCATGCAGCTGGTATTGGTAATTTCAAACCAAATTTTCATCCCAATGGTGCACATGCCAATGAAGAATCTGGTACAGATTCTGAGAAATTATCATTAAGACCACCTGGTGGTGTTTCATCTGCAAAAGAGTCTACAGCAGAGGATTCAACCAATACAGACACCTTTCCACCATCATCAGAAGCTACTACTTCTGGAATGGTCACTCCGCCTTCTAATGTGATACTGAAGATTCCGTCCTTTAAACCAACTTCAAAGAACGGAGTGGCTTCCGGCAGTGGTGGTTCAGGGAATACAGCGGAATCACTATTCCCAGTATCCCAGTTTCAGAGAAGCAGTAGCAACCCCAGTGCTGTGGCCACATTACATGAGTCATCTAGTCAGCCGTTCATCTCTCCTCCAGTGATTGGTGCAGCAAGGAGTGGCAGTGAATCCTCGTCACCTCCCGCAATTCCTCCTAGCCTGGTTGGCAAAGGAATTGGAGTTAGCCTTAGAGACATGATTGTAAAAAGCATTAATCAGAAATTTCAGCATCATGGTTCAAATGAGGTTCCTACCCTGCATATACCACCAAAAATTCTATTAGGGCATGAAAGCAGCATTGAACCTCCATTCAAACGAGGACGGTTCACTCCACCACTTTGCTCCAGTGGTCCTTCAATCACTACATCTGTCATCAAACATAACAACAACAGCCAGTCTGATGATAGACACGCTCAAAAAATGTCAACACAGCTTCTCAACAAGCCCagtagtactagtggtggtaTTAGTAGTGGAGGCAATCAAGGAAATTCATCAGGGGGTAAAGGAACTCGTCCAAAACGTGGGAAATATCGTAATTATGATAGAGACAGTTTAATTGAAGCTGTGCGAGCAGTGCAAAGAGGTGAAATGAGTGTGCATAGGGCTGGATCACATTTTGGTGTTCCCCACTCTACGCTTGAATATAAAGTAAAAGAACGCCATCTCATGAGACCACGAAAAAGAGAACCTAAGCCACAGCTTGAAGATCCTAAAAAGAAAGATGATATTAGACAACCACTTCCCAACATAGATAAAACAAAAATTCCTCCCAAAACTCCAAAAGCTCCGTTTACTCCTGCATCTCCTGGTTTACCAAATGCTCCAAATGGTTTAAAACTTTCACCATTATTTGATCCTGCAAGCATGCCCCCAATGGCATATGCAGCAGCACCACCTTTCCCATTTTGGCCACCAAATCCATTCCATTCACTACCCATTCCAGATTTTCCACATAGTGGAGCAGGAAACACACAAGTTGGTTACAGTCCCACTCCCGAATTCTTTGCCTCTCAGATGATGCAGAGGCTTCAGGAAGGATCTTCTCGGGTGCATGCTGGTGGAGGAGGCAGAGCAAATAGCCCTTCTGGAACACCTACGTGTAGCAGGAGTCCACCTGTCACAAATACTGGTGGAACTCTTGGTAAAAGTGCAAGGGAAATGGCAGAAAGTCTTTATGATGGAACTGGTGCCAATGGAAGCTTTTTGGATGGCATAATACGTTCGAGTTTAGAAATGGGTCTTCCTCATGGTGCTTCAAAAGACAGCAGCAACACAAATGCACCAGAGAATTTATCAAATAAGGCTCTTTTGGATCAGTTATGTCGAAACAGTCGCCTTACACCACTTCCACGAGCAACGTCCTTACCAGTAAATGATGGAGGAGCTAGTAGTTCTGATGATGATTCTCTGAAAAGGTCATCATCTAGAAATGCATTTGTTCCTGGTAGTATCAAGACAGCTGCTACAGAGTCAGATGCAAGCATGTCAGCCATAATTGATCTCTCTCCATCATCAAATGGATCTACAGTGGATCGTGATCTTCAGCATAAACACATTgcagatgatgaagatgatgatgccaAATCTCAGTCAGTGGTGGCAACTGAAGACACCAAAGTTGCTGCAGCGTTATCTAACGAGGCAGGAGTTTTAGAATCACAGTCAAAAGAAACCAATGGCATATCCAGTGTTAAGGACAATGCAACAAATGACACAGATTGTGGTGACAATGTTGAAGATGAAAGTGCCTGTGATAGTAAAATTATATTAAAGAGAGTTGATAAAGATGCTGCCAAAGATGACAAACAAGGAGAGGGAGAAGATCTACTAGAAACTGAGGATACCAAATCAAAGATCAACTCACTAAGAGACTGA
Protein Sequence
MSTVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERDSHLVIGNNTSAPVTLVNVSDKSLEPDLISKVEDAVPEDDEKELSGAEEEREVEKALQKPLLSMEDLVRFSVLDAGKGIGSLLQQGRALEDGLRKHSVSGEEGETCTSPPVFPGFPQNITDIWNGMEHSALGPYVSQLLATGIIGSKNPGGGTLEDRNTGSATAGDFLPKFPSPLLPEFVHRMIEEEKILIGEQLKKQHAAGIGNFKPNFHPNGAHANEESGTDSEKLSLRPPGGVSSAKESTAEDSTNTDTFPPSSEATTSGMVTPPSNVILKIPSFKPTSKNGVASGSGGSGNTAESLFPVSQFQRSSSNPSAVATLHESSSQPFISPPVIGAARSGSESSSPPAIPPSLVGKGIGVSLRDMIVKSINQKFQHHGSNEVPTLHIPPKILLGHESSIEPPFKRGRFTPPLCSSGPSITTSVIKHNNNSQSDDRHAQKMSTQLLNKPSSTSGGISSGGNQGNSSGGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSHFGVPHSTLEYKVKERHLMRPRKREPKPQLEDPKKKDDIRQPLPNIDKTKIPPKTPKAPFTPASPGLPNAPNGLKLSPLFDPASMPPMAYAAAPPFPFWPPNPFHSLPIPDFPHSGAGNTQVGYSPTPEFFASQMMQRLQEGSSRVHAGGGGRANSPSGTPTCSRSPPVTNTGGTLGKSAREMAESLYDGTGANGSFLDGIIRSSLEMGLPHGASKDSSNTNAPENLSNKALLDQLCRNSRLTPLPRATSLPVNDGGASSSDDDSLKRSSSRNAFVPGSIKTAATESDASMSAIIDLSPSSNGSTVDRDLQHKHIADDEDDDAKSQSVVATEDTKVAAALSNEAGVLESQSKETNGISSVKDNATNDTDCGDNVEDESACDSKIILKRVDKDAAKDDKQGEGEDLLETEDTKSKINSLRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00820851; iTF_00955492; iTF_00434730; iTF_00995128;
90% Identity
iTF_00955492;
80% Identity
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