Hcor040089.1
Basic Information
- Insect
- Hymenopus coronatus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_030762935.1
- Location
- CM060890.1:27219352-27222291[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-17 8.5e-14 53.7 0.1 1 44 11 55 11 56 0.94 2 2 7.5e-18 1.7e-14 55.9 0.0 1 43 536 579 536 581 0.95
Sequence Information
- Coding Sequence
- ATGAGTACGGTGGCTGGTCGCAGGACTTACACAGAAGAAGAACTGCAAGCAGCTCTTCGGGATATCCAGAGCGGTAAACTGGGAACAAGACGGGCTGCTGTAATTTATGGGATTCCTCGATCCACACTTCGCAACAAAGTCTACAAACTGGCTCTTGAACGTGAAAGAGATTCTCATTTGGTCATTGGCAACAATATCTCTGCACCTGTAACATTGGTAAATGTGTCAGATAAATCCTTGGAGCCAGAACTTGTGTCTAAAGCTGAAGATGTCATTCCAGAAGATGATGAGAAGGAACTTTCTGGAGCAGAGGAGGAGCGAGAAGTGGAGAAAGCCTTGCAGAAACCTTTGCTATCCATGGAAGATCTTGTGAGATTTTCAGTTCTTGATGCTGGAAAGGGGATTGGATCTCTTCTTCAACAGGGGCGAGCTTTGGAAGATGGACTCCGCAAACATAGTGTCAGTGGTGAGGAAGGTGAAACTTGTACTTCCCCTCCAGTTTTCCCCAATTTTCCACAAAACATTACAGAACTTTGGAACGGTATGGAACACAGTGCTCTTGGTCCATATGTGTCTCAGCTTCTTGCCACTGGTATCATTGGAAGTAAAAATCCTGGCGGAGGGACTCTTGAAGACAGGAACACAGGCAGTGCTACAGCTGGTGATTTCCTTCCAAAATTTCCTTCTCCTCTCCTACCTGAGTTTGTTCATAGGATGATAGAAGAAGAAAGGATTTTAATTGGCGAACAGTTGAAAAAACAGCATGCAGCTGGAATTGGCAATTTCAAACCAAATTTTCATCCCAATGGTGCACATGCCAGTGAAGAATCTGTTGCAGATTCTGAGAAACTAACATTAAGGCCACCTGGTGGTGTTTCTTCTGCAAAAGAGTCTACAGCAGAGGATTCAACCAATATAGACACCTTTCCACCATCATCAGAAGCTACTACTTCTGGAATGGTCACTCCGCCTTCTAATGTGATACTGAAGATTCCGTCCTTTAAACCAACTTCAAAGAACGGAGTGGCTTCCGGCAGTGGTGGTTCAGGGAATACAGCGGAATCACTGTTCCCAGTATCCCAGTTTCAGAGAAGCAGTAGCAACCCCAGTGCTGTGGCCACATTACATGAGTCATCTAGTCAGCCATTCATCTCTTCTCCAGTGATCGGTGCAGCAAGGAGCGGCAGTGAATCCTCTTCACCCCCAGCAATTCCTCCTAGCCTGGTTGGCAAAGGAATTGGAGTTAGCCTTAGAGACATGATTGTAAAAAGCATTAATCAGAAATTTCAGCATCATGGTTCAAATGAGGTTCCTTCTCTGCATATACCACCAAAAATGCTATTAGGGCATGAGAGTGGCATTGAACCACCATTCAAACGAGGGCGATTCACTCCTCCACTATGTTCCAGTGGCCCTTCAATCACTACATCTGTCATCAAACATAACAACAACAGCCAGTCTGATGATAGACATGCTCAAAAAATTTCAGCACAGCTTCTTAACAAGCccagtagtactagtggtggtattggtaatGGAGGCAATCAAGGAAATTCAACAGGGGGTAAAGGAACTCGGCCAAAACGTGGAAAATATCGTAATTATGATAGAGACAGTTTAATTGAAGCCGTGCGAGCTGTGCAAAGAGGTGAAATGAGTGTGCACAGGGCTGGGTCACATTTTGGAGTTCCCCATTCTACGCTTGAATATAAGGTGAAAGAACGTCATCTCATGAGACCACGAAAAAGAGAACCTAAACCTCAACTTGAAGATCCTAAAAAGAAAGATGATATAAGACAGCCTCTTCCCAACttagataaaacaaaaattcctCCCAAAACCCCAAAAGCTCCATTTACTCCTGCATCTCCTGGTTTACCAAATGCTCCAAATGGTTTAAAACTTTCACCATTATTTGATCCTGCAAGCATGCCTCCAATGGCATATGCAGCAGCACCTCCTTTCCCATTTTGGCCACCAAATCCATTCCATTCACTACCCATTCCAGATTTTCCACATAGTGGGACAGGAAACACACAAGTTGGTTACAGTCCAACTCCTGAATTCTTCGCCTCTCAGATGATGCAGAGGCTTCAAGAAGGATCTTCTCGGGTGCATGCTGGCGGAGGAGGCAGAGCAAATAGCCCTTCTGGAACTCCTACTTGTAGCAGGAGTCCACCTGTCACAAATACTGGTGGTACTCTTGGTAAAAGTGCAAGGGAAATGGCAGAAAGCCTTTATGATGGAACTGGTGCCAATGGAAGCTTTCTGGATGGCATAATACGTTCAAGTTTAGAGATGGGTCTTCCTCATGGTGTTTCAAAAGACAGTAACAACACAAATGCACCAGAGAATTTATCAAACAAGGCTCTTTTGGATCAGTTATGTCGAAACAGTCGCCTTACACCACTCCCACGAGCAATGTCCTTGCCAGTAAATGACGGAGGAGCTAGTAGTTCCGATGATGACTCCATCAAAAGGTCATCATCCAGAAATGCATTTGTTCCTGGTAGTATCAAGACTGCTGCTACTGAATCAGATGCAAGTATGTCAGCCATAATTGATCTCTCTCCATCGTCAAATGGATCTACAGTGGATCGTGATCTTCAGCATAAACACATTgcagatgatgaagatgatgatgccAAATCTCAGTCAGGGGTGGCAACTGAAGACACCAAAGTTGTTGCAGCGTTATCTAACGAGGCAGGAGTTTTAGAATCACAGTCAAAAGAAACTAATGGCATATCCAGTGTTAAGGACAATGCAACAAATGACACAGATTGTGGTGACAATGTTGATGATGAAAGTGCCTGTGatagtaaaattatattaaagagaGTTGATAAAGATGCTGCCAAAGATGACAAACAAGGAGAGGGAGAAGATCTACTAGAAACTGAGGATACCAAATCAAAGATCAACTCACTAAGAGACTGA
- Protein Sequence
- MSTVAGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERDSHLVIGNNISAPVTLVNVSDKSLEPELVSKAEDVIPEDDEKELSGAEEEREVEKALQKPLLSMEDLVRFSVLDAGKGIGSLLQQGRALEDGLRKHSVSGEEGETCTSPPVFPNFPQNITELWNGMEHSALGPYVSQLLATGIIGSKNPGGGTLEDRNTGSATAGDFLPKFPSPLLPEFVHRMIEEERILIGEQLKKQHAAGIGNFKPNFHPNGAHASEESVADSEKLTLRPPGGVSSAKESTAEDSTNIDTFPPSSEATTSGMVTPPSNVILKIPSFKPTSKNGVASGSGGSGNTAESLFPVSQFQRSSSNPSAVATLHESSSQPFISSPVIGAARSGSESSSPPAIPPSLVGKGIGVSLRDMIVKSINQKFQHHGSNEVPSLHIPPKMLLGHESGIEPPFKRGRFTPPLCSSGPSITTSVIKHNNNSQSDDRHAQKISAQLLNKPSSTSGGIGNGGNQGNSTGGKGTRPKRGKYRNYDRDSLIEAVRAVQRGEMSVHRAGSHFGVPHSTLEYKVKERHLMRPRKREPKPQLEDPKKKDDIRQPLPNLDKTKIPPKTPKAPFTPASPGLPNAPNGLKLSPLFDPASMPPMAYAAAPPFPFWPPNPFHSLPIPDFPHSGTGNTQVGYSPTPEFFASQMMQRLQEGSSRVHAGGGGRANSPSGTPTCSRSPPVTNTGGTLGKSAREMAESLYDGTGANGSFLDGIIRSSLEMGLPHGVSKDSNNTNAPENLSNKALLDQLCRNSRLTPLPRAMSLPVNDGGASSSDDDSIKRSSSRNAFVPGSIKTAATESDASMSAIIDLSPSSNGSTVDRDLQHKHIADDEDDDAKSQSGVATEDTKVVAALSNEAGVLESQSKETNGISSVKDNATNDTDCGDNVDDESACDSKIILKRVDKDAAKDDKQGEGEDLLETEDTKSKINSLRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01410676;
- 90% Identity
- iTF_00955492;
- 80% Identity
- -