Basic Information

Gene Symbol
ct
Assembly
GCA_030765045.1
Location
CM060965.1:88538963-88616106[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.8e-27 1.8e-22 81.4 0.0 3 72 759 829 757 834 0.95
2 3 9.2e-32 4.2e-27 96.2 0.0 3 77 1252 1327 1250 1329 0.96
3 3 2e-30 9.2e-26 92.0 0.0 3 75 1469 1542 1467 1546 0.95

Sequence Information

Coding Sequence
ATGAACTTTCTGGGAATCAGCAGAAGACGTTTCCTTGGAACCATTTCCTTTCCCAGCAGAAATGATGTAGTGCTCCAGGACGCAGACTCCTCATCTGCGATCAGCTTCCCTCTCGGATCCGATCGGCTGCTACCCTCTCGTCTGCCACAGCGTCCCTCTTCTGTCTTTTTTGTTCTCTTCTGTCGTACCATATTTCTCCGTGGCACTAACACAACGGCCACGGTGACGTACGACTGGAGGCGCCCGTGTGCGAGACGAGAGCAAGTGCCACTGTTGCGCGCAGTCGGTCCTTTCCCCTTCTCCCAGGTTCTCGCGGCGAAGAAGCAAACTTCAAAAGACGCGAAGTTTGCCGTGGTTTCTACCTCTGGACCGCTCACCATCTTAACTACTCTCGTCCCCTCTGACCAACCATCACTCCCCGGCGAAGGCGTCAACGGGAAGAAACGCTTCAGATCGAACAAGAAGATGAAATGCGTGCAACACCGAACGAGTGAGGGATTCAGTCTCAGCGGAACACAAATACCTACCTCGGTTCGGATAATAGAGCATCGAATATTGATTTGTTTGACTTGGACTAATACCTCGTCGCGACGAAGAGACAATTCTCCAAGACGGCCAGGAGCTAAGTGTAGCGGATGGAGAAAAATCGCGACTGGAGCAAGAAGCAAGCTCCGCTCGAGAGGCCCGCGGTTCATCGTTACGCTCAAGACAACGGTCATCGTAAGAAGCGTTCGTCTTGAGTCGTTGATATCCCAGCTGGTGGAAGACGTGCAGCGATTGCAGGCCAGCATAGCCAAGCTCCAGGAAAGCTCGGCGGGTCAAATCGCCCGTCTAGAGGAGCAGCTGGACCACAAACGTCAGCACATAGCAAGACTGGAGGCGCGTCTCGATGCCCAACGTGACTACGATGACGTCAAGCGAGAACTCAGCATTTTGCGTAGTGTGGAGTTCCCGCCCCTGGGTGCAGGAGAAGCTGCCAGCAAATCTCTGGAGATGCTGCTTCTGGAGAGAACGAAAGCCCTTCAGCAGGCGGAGAACGCCGCCCTCAAGGCCGCAGCGACAGCGGACCTTCAAGGAggcactgccgccaccaccatcaccaccaccccaacGACAACGTCACATCATCTGGTGCCGGAATCCCCGcagcctcctcctcctcctccaccaccacccttACCTCACCATCACGCGCTACCATCCGACCACTCCAACGTACCGcccccgccaccgccgccaccacctccaccgccacctacCTCCGTCCCGCCACCCTCAGCCATGCTATTCCCGCCACCCCTACAAAATGTTGAGACCTTCGGCTCCTTCCTGGGTGAGGAGATCGTCGCCAATTGGCGGCGGTCCCTGGAAAGAACCATCCTGAGTCAGAGTCACGCTGCCGCCATATCCTCAgctcagcaccaccatcaccaccaacagcaGCAGcctcagcagcaacaacagcagcagcaacctcctccaccaccaccacaaacacccaCACAGCATCAACTAAATATCCACTCCCCTACAGATACGCAACAACCCTCTCCAGCGACGCCGGGATCCCTGACGGCGGCATCGACGCCGCAGCAGCAGTCCTCGGAGGCAGCAGAAGGCAACGGGAAGCCCTCGGACAGCGGCGCTCCCTCGCCACGTAACGCTTCTCCACCCTCTTCCGCCGCCACCCCGTCTTTCACCTCGGCGTCCTCGCCTTCGGCGCCACCGGCCATCTCTTCACCCCTGGCCTCCGGCACGACGCTGACGACGACGACTACGGCAGCCGACAACAGTGGAATACCCCTACATCATCACCATCTTATGAATGGCAACCCGAAGACGCCTCCGGAAGACGCTTCGTCGTCAGGTACGGCATCAACGACGACGAGTGCATTGTGTAGTAACAGTAACACTCACGGAATTACGACGAGTAGCGGGCATTTACTGTCGAGTGCGGGAATCGGTGGTATCAGTGTTAGTTCTAGTAACAGTATCAGTAACAATAGCGTGGTTCCGCCGCCTCCAACGAGCACCCCGGTAAGCGTAGCGGCTGCGGCGGCCGCGGCAGGACTCGGCTTCTTTAGGAGCGACGATAGCATGAAGAGTCCGTTCAGGTTCGACGATCCGCGGAGCCCGTTCCGCTTCGCGGACGACGGTCCAGGCGGCGGCGGAGTCATGGTGGGTCGTCTAGGCGAGTCGCTCATTCCCAAAGGCGACCCCATGGAGGCGCGTCTCCAGGAGATGCTCCGTTACAACATGGACAAGTACTCGACCCAGAACCTGGACACACTTCACATTTCGAGGCGAGTTCGCGAATTGCTTTCCATCAACAACATTGGACAACGGCTGTTTGCCAAGTACGTGCTCGGCCTGTCCCAGGGTACCGTGTCCGAGCTTCTGTCCAAACCAAAACCCTGGGACAAGCTGACGGAGAAAGGACGAGACAGCTACCGCAAGATGCATGCATGGGCCTGCGACGAGAACGCCGTGCTTCTGCTCAAGTCACTCATCCCAAAGAAAGTTCACTTCCGGACGGCGACAGAGGAAGGCGTCGGGAGATTAGTGACCGAGGGGGAGGCCGGGTCAAGACAAGAGCCGGGAAGTAATCCTCCCCCACCTCCCCACTCTCAAGTTACAAGTTGGCTGGACGGGAAGGGGCAGCGTTCGGGTCAAAGTGTGGCCGCGTCGTCGGGAGTGTGGAAAGACACGGGTATCCCAGCGTTCGCCCGCGGGGACGCGGACAACATGACAGAGGAGCGGATAGCGCACATCCTGAGCGAGGCCAGTCAGATGATGAAGACCCAAGTTGAAGACAGCCACAGCAACGACAGCAAGTCGCCGAACAATCAAGGACAGTGCCCTTCACCGTTGGGTAAGGATGGTTCACAAAATCGACGtcttaaaaaatatgaaaatgatGACATTCCACAGGAGAAGGTGGTCCGCATCTATCAGGAAGAATTGGCAAAGCTGATGGGGCGCCGCATGGAGGATACCATGAGAGGACCTCGGGAGCATTTCCCTAGTCTGCTTTTTCCCCATTTCTTCAGTGCTGCTGGAGGTGGTGGTCCCATGGACCGAACACAAGAGGAAATTCGTATGGCACTGGATGCCTATCACCGAGAACTTGCCAAGATCAACTCCGTGTCCTCCTGTCCCAGTGTTGGTAGCCCTGCTGGTCTTCCAGGTCTTCCAGGTTTGCTGGCTCTACAGCAGCAAGCCCTAAgtcagcaacaacagcaacagcagcagcaacaacagcagcaacagcagcagcagcaacagcaacaacatgcTCAAATTAATGGCATGGCACAGGACTTGTCACTACCAAAAGAGCGTAAGGATGGGAAGCTATCAAATGGAGGAGCAGAACTTCACATGGAAGGATTGGATGGGAGCAAGAAGGAGCCAAGCATGATGGAGTCTGTAGCAGACGTTCTTAGGCATGCAGGCAGTGCCTTCTCTCTCGTCAGACCAAAGACTGAGCCAGGAGTACCTGGTGGTCCTCAGCAGTCAACAACTGGTAGCAGCAGTGCAAGTAGTCCACTGAGTAATTCCATTCTTCCACCTGCAATGACACCAGCTGATGACTTCTCCAGTGGAGCAGCTGCAGCAAGTCCTCTACAACGCATGGCCTCCATCACTAACTCTCTCATCTCACAGCCCAGCACTCCTACCCATCACAGTCCTTCTCAGCGACCCCTTAAAGCCGTCCTACCTCCCATTACACAACAGCAATTTGACATGTTCAACAATCTTAATACGGAAGAGATTGTtaaaaaggTAAAAGAATCACTGAGCCAGTATTCAATAAGTCAGAGGCTATTTGGAGAGTCAGTATTAGGATTGTCACAAGGAAGCGTATCAGACTTGCTGGCAAGGCCTAAACCATGGCATATGCTAACACAGAAAGGCAGAGAACCATTCATTCGCATGAAAATGTTCCTTGAAGATGACAATGCTGTACATAAACTGGTTGCCAGCCAGTATAAAATAGCCCCTGAGAAGCTTATGCGAACGGGAAACTACGCAGcaTGTTCATCACTCAGCAAGCCTCCACCTCCGTCAAAGCTGGGTGTTTCAGATTCTGTATCAGGAAAAGGAATGCCTGGGGACAATCAAGGACCATTACTGCCTCCTTCTCTGCAGCTAATGCCTCCACACCCTCAACAACCCCCCTCAgtaccacagccaccaccgcctccTCTCATGGTAACTCCACCTGGTCATCATTCCATTGGTTCATTGTCAGGAGCTGACCTGAAGAAACCACAGCAAAACCAACAATCTCCACATCCTAACCTCCATCCTTCACAGcaccatcatcagcagcagtCCTCAGCATTGCGAGCTCTTCAGCAGCACATGACACCCAGTGTGTATGAAATGGCAGCACTTACACAGGATCTTGACACTCAAGTCATCACTACCAAGATCAAAGAGGCTCTGCTAGCCAACAATATCGGACAAAAGATATTTGGAGAAGCAGTCTTGGGTTTATCGCAAGGTTCAGTGAGTGAGCTTCTGTCAAAACCAAAACCGTGGCATATGCTGAGCATCAAAGGAAGAGAGCCTTTCATTCGCATGCAGCTTTGGCTCAGCGATGCACATAATGTTGACAGACTGCAGGCACTCAAGAATGAGCGGCGAGAAGCTAACAAAAGAAGGCGTAGCAGTGGTCcaggtggtggaggtggacatggtggtggtggaggtgcagaTAACTCTAGTGATACTTCATCCAACGACACATCTGAGTTCTACCACAGCCCCAGCCCTGGCCCAGGGCCACCATCTGCCAAGAAGCAGCGTGTGTTGTTCTCTGAGGAGCAGAAGGAGGCACTGCGGTTGGCCTTTGCTCTTGACTCTTACCCAAATGTAGCAACCATAGAGTTCCTGAGCGTAGAACTGTCCTTGTCATCACGGACCATTACCAACTGGTTCCATAATCATAGGATGCGTCTGAAACAGCAGGTGCCCCATGGTTTGGCTACTGGAGGGGATGGTGTAGGCATATTACCTCCTCCAAGAAGTGATCCCactggtggtgcaggtggtggcaGTCAACAATCATTTGACCCTGTCCAATTTAGACTACTTCTAAATCAGAGGCTGATGGAGCTGCAAAAGGACCGCATTGGCCTCGGTTCCGTCCCGCTGCCATACCCACCATACTTTGCAGCAAATGCCAATCTGGCTGCACTTATTGGTCGTGGTTTGTTACCCACGCCCACAGACTGTGATCCCAAAGAACAATTCAGTGGTCTAGACCTTAGCATGGGTGGACTAAAGCGTGAGCCTACagattttgaagatgaggaggatGCTGAAAGCAACATAGGTAGTGAGGATTCGAACTTATCAGCAACAAGCTTGAGGGATGCTGCTGCCAATGCTAGCATAAAGAAGGAACCATCCTCATCGTCTTCAACCACTCCAGCTCCTACAGCAACTGCAGGACGCTCGAGACGTAAACCAGCTGCTCCTCAGTGGGTAAATCCAGAATGGCAAGAGGCTGATCCTGGTAAGGACAAGCCTGGTGCAGCAGGTGGTAGCAGCACTGGCAAGGAAGTGATCATTAATGGCGTCTGTGTAATGCAAACAGCAGCTGATGATTATGGAATAAAACTTGGTACCAATGATGAAGAAACTGTTAGAGTTGAACCAACCCCTGTGCTTGATCCTTTTGATGATCGCTGCAGTGATGCCTCTTCTGAAGTGGTTCCAGCAGAAGAACAGAGGACGCCACAAGCAATACCCATAGAAGCAGATGAAGAGCAAGTAAGTGCAAAGTCTGAACCATCATCTCCACAGCAACCAGAGGTGGAGTTGCCAATAGAAGAAGAGGAACCAGAGGGTGAGGTGACAGAAGTGGAGGGCTCTGTTGAAGTGAGGCATAACTTCATCAAACAAGAGGATGAGGAAGATGTCCTCCCTGGTGTATctgaagaagaaaggaaagacgCAGGAGAGTGGGATAGATCAGGAGGAAAGAGGGAGGCTGTGATGGATAAAATGATTAAGACCGAAGACCATGAAGAAAGATGGGAATACTAA
Protein Sequence
MNFLGISRRRFLGTISFPSRNDVVLQDADSSSAISFPLGSDRLLPSRLPQRPSSVFFVLFCRTIFLRGTNTTATVTYDWRRPCARREQVPLLRAVGPFPFSQVLAAKKQTSKDAKFAVVSTSGPLTILTTLVPSDQPSLPGEGVNGKKRFRSNKKMKCVQHRTSEGFSLSGTQIPTSVRIIEHRILICLTWTNTSSRRRDNSPRRPGAKCSGWRKIATGARSKLRSRGPRFIVTLKTTVIVRSVRLESLISQLVEDVQRLQASIAKLQESSAGQIARLEEQLDHKRQHIARLEARLDAQRDYDDVKRELSILRSVEFPPLGAGEAASKSLEMLLLERTKALQQAENAALKAAATADLQGGTAATTITTTPTTTSHHLVPESPQPPPPPPPPPLPHHHALPSDHSNVPPPPPPPPPPPPPTSVPPPSAMLFPPPLQNVETFGSFLGEEIVANWRRSLERTILSQSHAAAISSAQHHHHHQQQQPQQQQQQQQPPPPPPQTPTQHQLNIHSPTDTQQPSPATPGSLTAASTPQQQSSEAAEGNGKPSDSGAPSPRNASPPSSAATPSFTSASSPSAPPAISSPLASGTTLTTTTTAADNSGIPLHHHHLMNGNPKTPPEDASSSGTASTTTSALCSNSNTHGITTSSGHLLSSAGIGGISVSSSNSISNNSVVPPPPTSTPVSVAAAAAAAGLGFFRSDDSMKSPFRFDDPRSPFRFADDGPGGGGVMVGRLGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHISRRVRELLSINNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKVHFRTATEEGVGRLVTEGEAGSRQEPGSNPPPPPHSQVTSWLDGKGQRSGQSVAASSGVWKDTGIPAFARGDADNMTEERIAHILSEASQMMKTQVEDSHSNDSKSPNNQGQCPSPLGKDGSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMEDTMRGPREHFPSLLFPHFFSAAGGGGPMDRTQEEIRMALDAYHRELAKINSVSSCPSVGSPAGLPGLPGLLALQQQALSQQQQQQQQQQQQQQQQQQQQQHAQINGMAQDLSLPKERKDGKLSNGGAELHMEGLDGSKKEPSMMESVADVLRHAGSAFSLVRPKTEPGVPGGPQQSTTGSSSASSPLSNSILPPAMTPADDFSSGAAAASPLQRMASITNSLISQPSTPTHHSPSQRPLKAVLPPITQQQFDMFNNLNTEEIVKKVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYAACSSLSKPPPPSKLGVSDSVSGKGMPGDNQGPLLPPSLQLMPPHPQQPPSVPQPPPPPLMVTPPGHHSIGSLSGADLKKPQQNQQSPHPNLHPSQHHHQQQSSALRALQQHMTPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGGGGGHGGGGGADNSSDTSSNDTSEFYHSPSPGPGPPSAKKQRVLFSEEQKEALRLAFALDSYPNVATIEFLSVELSLSSRTITNWFHNHRMRLKQQVPHGLATGGDGVGILPPPRSDPTGGAGGGSQQSFDPVQFRLLLNQRLMELQKDRIGLGSVPLPYPPYFAANANLAALIGRGLLPTPTDCDPKEQFSGLDLSMGGLKREPTDFEDEEDAESNIGSEDSNLSATSLRDAAANASIKKEPSSSSSTTPAPTATAGRSRRKPAAPQWVNPEWQEADPGKDKPGAAGGSSTGKEVIINGVCVMQTAADDYGIKLGTNDEETVRVEPTPVLDPFDDRCSDASSEVVPAEEQRTPQAIPIEADEEQVSAKSEPSSPQQPEVELPIEEEEPEGEVTEVEGSVEVRHNFIKQEDEEDVLPGVSEEERKDAGEWDRSGGKREAVMDKMIKTEDHEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00434616;
90% Identity
iTF_00434698;
80% Identity
iTF_01410649;