Basic Information

Gene Symbol
ct
Assembly
GCA_030765065.1
Location
CM060980.1:55486339-55568788[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.2e-27 2.2e-22 81.7 0.0 3 72 537 607 535 612 0.95
2 3 6.5e-32 4.5e-27 96.7 0.0 3 77 970 1045 968 1047 0.96
3 3 2e-30 1.4e-25 91.9 0.0 3 75 1187 1260 1185 1264 0.95

Sequence Information

Coding Sequence
ATGGTAGTGTGGCGGCGAAGGGAAACTGACAAATCTGTGAATCGGAGCGGGGCGTACGGGATATCCCAGCTGGTGGAGGACGTGCAGCGGTTGCAGGCCAGCATAGCCAAGCTCCAGGAAAGCTCGGCGGGTCAAATCGCCCGTCTAGAGGAGCAGCTGGACCACAAGCGTCAGCACATAGCAAGACTGGAGGCGCGTCTCGACGCCCAGCGTGACTACGATGACGTCAAGCGAGAACTCAGCATTTTGCGTAGTGTGGAGTTCCCGCCCCTGGGTGCAGGAGAAGCTGCCAGCAAATCTCTGGAGATGTTGCTTCTGGAGAGAACGAAAGCCCTTCAGCAGGCGGAAAACGCCGCCCTCAAGGCCGCAGCGACAGCGGACCTTCAAGCGGTAGCGGCAACAACATCGGTCCGTGTGATTCCAGGAGGCACTgccgccaccaccatcaccaccaccccaACGACAACGTCACATCATCTGGTGCCGGATTCCCCgcagcctcctcctcctccaccccTACCCCACCATCACGCGCTACCACCCGATCACTCCACCGTACCGCCCccgccaccaccgccgccacctcCACCGCCACCTACCTCCGTCCCGCCGCCCTCGGCCATGCTATTCCCGCCACCCTTACAAAATGTTGAGACCTTCGGCTCCTTCCTGGGTGAGGAGATCGTCGCCAATTGGCGGCGGTCCCTGGAAAGAACCATCCTGAGTCAGAGTCACGCTGCCGCCATATCCTCAGCtcagcaccaccatcaccaccaacaGCAGCAGTctcagcaacaacagcagcagcaacctccaccaccaccacaaacGCCCACACAGCATCAACTAAATGTCCACTCCCCTACAGATACGCAACAACCCTCTCCGGCGACGCCAGGATCCCTGACGGCGGCATCGACGCCGCAGCAGCAGTCCTCGGATGCAGCAGAAGGCAACGGGAAGCCCTCGGACAGCGGCGCTCCCTCGCCACGCAACGCTTCTCCGCCCTCTTCCGCCGCCACCCCGTCTTTCACCTCGGCGTCCTCGCCTTCGGCGCCGCCGGCCATCTCTTCACCCCTGGCCTCCGGCACGACGCTGACGACGACGACCACGGCAGCCGACAACAGCGGAATACCCTTACATCATCACCATCTTGTGAACGGCAACCCGAAGACGCCTCCGGAAGATGCTTCATCGTCAGGTACGGCATCAACGACAACGAGTGCATTGTGTAGTAACAGTAACACTCACGGAATTACGACGAGTAGCGGGCATTTACTCTCGAGTGCGGGAATCGGTGGTATCAGTGTTAGTTCTAGTAACAGTATCAGTAACAATAACGTGGTTCCGCCGCCTCCAACGAGCACCCCGGTAAGCGTAGCGGCTGCGGCGGCCGCGGCAGGACTCGGCTTCTTTAGGAGCGACGATAGCATGAAGAGTCCGTTCAGGTTCGACGATCCGCGGAGCCCGTTCCGCTTCGCGGACGATGGTCCAGGCGGCGGCGGAGTCATGGTGGGTCGTCTAGGCGAGTCGCTCATTCCCAAAGGCGACCCCATGGAGGCGCGTCTCCAGGAGATGCTCCGTTACAACATGGACAAATACTCGACCCAGAACCTGGACACACTTCACATTTCGAGGCGAGTTCGTGAATTGCTTTCCATCAACAACATCGGACAACGGCTGTTTGCCAAGTACGTGCTCGGTTTGTCCCAGGGTACCGTGTCGGAGCTTCTGTCCAAACCAAAGCCCTGGGACAAGCTGACGGAGAAAGGACGAGACAGCTACCGCAAGATGCACGCATGGGCCTGCGACGAGAACGCCGTGCTTCTGCTCAAGTCACTCATCCCAAAGAAAGGGAAAGACACGGGTATCCCAGCGTTCGCCCGCGGGGACGCGGACAACATGACAGAGGAGCGGATAGCGCACATCCTGAGCGAGGCCAGTCAGATGATGAAGACCCAAGTTGAAGACAGCCACAGCAACGACAGCAAGTCGCCGAACAATCAAGGACAGTGCCCTTCACCGTTGGGTAAGGATGGTTCACAAAATCGACGtcttaaaaaatatgaaaatgatgACATTCCACAGGAGAAGGTGGTCCGCATCTATCAGGAAGAATTGGCAAAGCTGATGGGGCGCCGCATGGAGGATACCATGAGAGGACCTCGGGAGCATTTCCCTAGTCTGCTTTTTCCCCATTTCTTCAGTGCTGGAGGTGGTGGTCCCATGGACCGAACACAAGAAGAAATACGCATGGCACTGGATGCCTATCACCGAGAACTTGCCAAGATCAACTCTGTGTCCTCCTGTCCAAGTGTTGGTAGCCCTGCTGGTCTTCCAGGTCTTCCAGGTTTGTTGGCTCTACAGCAGCAAGCCCTAAGtcaacagcaacagcagcagcagcaacaacagcagcaacagcaacagcagcagcaacagcaacaacacGCTCAAATTAATGGCATGGCGCAGGACTTGTCACTACCAAAAGAGCGTAAGGATGGGAAGCTGTCCAATGGGGGAGCAGAACTTCATATGGAAGGATTGGATGGGAGCAAGAAGGAGCCGAGCATGATGGAGTCTGTAGCAGATGTTCTCAGGCATGCAGGCAGCGCTTTCTCTCTTGTCAGACCAAAGACTGAGCCAGGAGTACCTGGTGGTCCTCAGCAGTCAACAACTGGTAGCAGCAGTGCAAGTAGTCCACTGAGTAATTCCATTCTTCCACCTGCAATGACACCAGCTGATGACTTCTCCAGTGGAGCAGCTGCAGCAAGTCCTCTGCAACGTATGGCCTCCATCACCAACTCTCTCATCTCACAGCCCAGCACTCCTACTCATCACAGTCCTTCTCAGCGACCCCTCAAAGCCGTCCTACCTCCCATTACACAACAGCAATTTGACATGTTCAACAATCTCAACACGGAAGACATTGTCAAAAAGgTAAAAGAATCACTGAGCCAGTATTCAATTAGCCAGAGGCTATTTGGAGAGTCAGTATTAGGATTGTCACAAGGTAGCGTGTCAGACTTGTTGGCAAGGCCTAAACCATGGCACATGCTAACACAGAAAGGCAGAGAACCATTCATTCGTATGAAGATGTTCTTGGAAGATGACAATGCTGTGCATAAACTGGTTGCCAGCCAGTATAAAATAGCCCCTGAAAAGCTTATGCGAACGGGAAATTATGCAGCATGTTCATCACTCAGCAAACCTCCACCTCCATCAAAGCTGGGTGTTTCAGATCCTGCATCGGTAAAGGGAATGCCTGGGGACAATCAAGGGCCATTACTGCCTCCTTCTCTACAGCTAATGCCTCCACATCCTCAACAGCCCTCCTCAGTACCACAGCCACCACCTCCTCCTCTCATGGTAACTCCACCTGGCCATCATTCCATAGGTTCATTGTCAGGAGCTGACCTGAAGAAACCACAGCAAAACCAACAGTCTCCACACCCCAACCTCCATCCTTCACAGCACCATCATCAACAGCAGTCCTCAGCATTGCGAGCTCTTCAGCAGCACATGACACCCAGTGTGTATGAAATGGCAGCACTTACACAGGATCTTGACACTCAGGTCATCACTACGAAGATCAAAGAGGCTCTGCTAGCCAACAATATCGGACAAAAGATATTTGGAGAAGCAGTCTTGGGTTTATCGCAAGGTTCAGTGAGTGAGCTTCTGTCAAAACCAAAACCATGGCATATGCTGAGCATCAAAGGAAGAGAGCCTTTCATTCGTATGCAGCTTTGGCTCAGCGATGCACATAATATTGACAGGCTGCAGGCACTCAAGAATGAACGGCGAGAAGCCAACAAGAGAAGGCGTAGCAGTGGTCCAGGTGGCGGAGGTGGgcatggtggtggtggaggtgcaGATAACTCTAGTGATACATCATCCAATGACACATCTGAGTTCTACCATAGCCCCAGTCCTGGCCCAGGGCCACCATCTGCCAAGAAGCAGCGTGTGTTGTTCTCCGAGGAGCAGAAGGAGGCACTGCGGTTGGCCTTTGCTCTTGACTCTTACCCAAATGTAGCAACTATAGAGTTCCTGAGCGCAGAACTGTCCTTGTCATCACGGACCATTACCAACTGGTTTCATAATCATAGGATGCGCCTGAAACAGCAGGTACCCCATGGTTTGGCTACTGGAGGGGATGGTGTGGGCATATTACCTCCTCCAAGAAGTGATCCCACTGGTGGAGCAGGTGGGGGCAGCCAGCAATCGTTTGACCCTGTCCAATTTAGACTACTACTAAATCAGAGGCTGATGGAGCTGCAAAAGGACCGCATTGGCCTCGGTTCCGTCCCGCTGCCATACCCACCATACTTCGCAGCAAATGCCAATCTGGCTGCGCTCATTGGTCGTGGTTTGTTACCCACGCCCACAGACTGTGATCCCAAAGAACAATTCAGTGGTCTAGACCTCAGCATGGGTGGACTAAAGCGTGAGCCTGCAGATTTTGAAGATGAAGAGGATGCTGAAAGCAACATAGGTAGCGAGGATTCAAATTTATCAGCAACAAGCTTGAGGGATGCTGCTGCCAATGCTAGCATAAAGAAGGAACCATCCTCATCATCTTCAACCACACCAGCTCCTACAACAACTGCAGGACGTTCAAGACGTAAACCAGCTGCTCCTCAGTGGGTAAATCCAGAATGGCAAGAGGCTGATGCTGGTAAGGACAAGCCTGGTGCTGCAGGTGGTAACAGCACTGGCAAGGAAGTGATCATTAATGGTGTCTGTGTAATGCAAACAGCAGCTGATGATTATGGAATTAAACTTGGTACCAATGATGAAGAAACTGTTAGAGTTGAACCAACTCCTGTGCTTGATCCTTTTGATGATCGCTGCAGTGATGCCTCTTCAGAAGTAGTTCCAGCAGAAGAACAGAGGACACCACAAGCAACAACCATAGAAGCAGATGAAGAGCAAGTAAGCGCAAAGTCTGAACCATCATCTCCACAGCAACCAGAAGTGGAGGTCCCGATGGAAGAAGAGGAACCAGAGAGTGAAGTGACGGAAGTGGAGGGCTCTGTTGAAGTGAGGCATAACTTCATCAAACAAGAGGATGAAGATGATGTTCTCCCTGGCGTATcggaagaagaaaggaaagacaCAGGAGAATGGGATAGATCAGGAGGAAAGAGAGAGGCTGTGATGGATAAAATGATCAAGACCGAAGACCATGAAGAAAGATGGGAGTATTAA
Protein Sequence
MVVWRRRETDKSVNRSGAYGISQLVEDVQRLQASIAKLQESSAGQIARLEEQLDHKRQHIARLEARLDAQRDYDDVKRELSILRSVEFPPLGAGEAASKSLEMLLLERTKALQQAENAALKAAATADLQAVAATTSVRVIPGGTAATTITTTPTTTSHHLVPDSPQPPPPPPLPHHHALPPDHSTVPPPPPPPPPPPPPTSVPPPSAMLFPPPLQNVETFGSFLGEEIVANWRRSLERTILSQSHAAAISSAQHHHHHQQQQSQQQQQQQPPPPPQTPTQHQLNVHSPTDTQQPSPATPGSLTAASTPQQQSSDAAEGNGKPSDSGAPSPRNASPPSSAATPSFTSASSPSAPPAISSPLASGTTLTTTTTAADNSGIPLHHHHLVNGNPKTPPEDASSSGTASTTTSALCSNSNTHGITTSSGHLLSSAGIGGISVSSSNSISNNNVVPPPPTSTPVSVAAAAAAAGLGFFRSDDSMKSPFRFDDPRSPFRFADDGPGGGGVMVGRLGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHISRRVRELLSINNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKGKDTGIPAFARGDADNMTEERIAHILSEASQMMKTQVEDSHSNDSKSPNNQGQCPSPLGKDGSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRMEDTMRGPREHFPSLLFPHFFSAGGGGPMDRTQEEIRMALDAYHRELAKINSVSSCPSVGSPAGLPGLPGLLALQQQALSQQQQQQQQQQQQQQQQQQQQQHAQINGMAQDLSLPKERKDGKLSNGGAELHMEGLDGSKKEPSMMESVADVLRHAGSAFSLVRPKTEPGVPGGPQQSTTGSSSASSPLSNSILPPAMTPADDFSSGAAAASPLQRMASITNSLISQPSTPTHHSPSQRPLKAVLPPITQQQFDMFNNLNTEDIVKKVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYAACSSLSKPPPPSKLGVSDPASVKGMPGDNQGPLLPPSLQLMPPHPQQPSSVPQPPPPPLMVTPPGHHSIGSLSGADLKKPQQNQQSPHPNLHPSQHHHQQQSSALRALQQHMTPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERREANKRRRSSGPGGGGGHGGGGGADNSSDTSSNDTSEFYHSPSPGPGPPSAKKQRVLFSEEQKEALRLAFALDSYPNVATIEFLSAELSLSSRTITNWFHNHRMRLKQQVPHGLATGGDGVGILPPPRSDPTGGAGGGSQQSFDPVQFRLLLNQRLMELQKDRIGLGSVPLPYPPYFAANANLAALIGRGLLPTPTDCDPKEQFSGLDLSMGGLKREPADFEDEEDAESNIGSEDSNLSATSLRDAAANASIKKEPSSSSSTTPAPTTTAGRSRRKPAAPQWVNPEWQEADAGKDKPGAAGGNSTGKEVIINGVCVMQTAADDYGIKLGTNDEETVRVEPTPVLDPFDDRCSDASSEVVPAEEQRTPQATTIEADEEQVSAKSEPSSPQQPEVEVPMEEEEPESEVTEVEGSVEVRHNFIKQEDEDDVLPGVSEEERKDTGEWDRSGGKREAVMDKMIKTEDHEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2