Basic Information

Insect: Tenebrio molitor
Gene Symbol: -
Assembly: GCA_963966145.1
Location: OZ014546.1:5939039-5944064[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0001 0.0089 17.0 2.4 1 23 404 426 404 426 0.97

2 18 3.1e-05 0.0027 18.7 2.5 1 20 432 451 432 454 0.94

3 18 1.8e-05 0.0015 19.4 0.8 1 23 460 482 460 482 0.98

4 18 4.4e-05 0.0037 18.2 4.4 1 21 488 508 488 510 0.95

5 18 3.1e-05 0.0027 18.7 4.6 1 23 516 538 516 538 0.99

6 18 3e-05 0.0026 18.7 5.3 1 23 544 566 544 566 0.97

7 18 5.1e-06 0.00043 21.2 7.2 1 23 572 594 572 594 0.97

8 18 1.2e-07 9.9e-06 26.3 2.7 1 23 600 622 600 622 0.98

9 18 8.6e-05 0.0073 17.3 6.7 1 23 628 650 628 650 0.97

10 18 5e-05 0.0043 18.0 5.8 1 23 656 678 656 678 0.97

11 18 3.8e-07 3.2e-05 24.7 2.9 1 23 684 706 684 706 0.98

12 18 4e-05 0.0034 18.3 8.0 1 23 712 734 712 734 0.98

13 18 3.3e-05 0.0028 18.6 9.1 1 23 740 762 740 762 0.98

14 18 2e-05 0.0017 19.3 7.7 1 23 768 790 768 790 0.98

15 18 1.3e-05 0.0011 19.9 7.1 1 23 796 818 796 818 0.97

16 18 9.6e-05 0.0082 17.1 0.5 1 23 824 846 824 846 0.97

17 18 0.1 8.9 7.6 5.0 1 23 856 878 856 878 0.98

18 18 8.3e-07 7.1e-05 23.6 0.9 1 23 884 906 884 906 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0001	0.0089	17.0	2.4	1	23	404	426	404	426	0.97
2	18	3.1e-05	0.0027	18.7	2.5	1	20	432	451	432	454	0.94
3	18	1.8e-05	0.0015	19.4	0.8	1	23	460	482	460	482	0.98
4	18	4.4e-05	0.0037	18.2	4.4	1	21	488	508	488	510	0.95
5	18	3.1e-05	0.0027	18.7	4.6	1	23	516	538	516	538	0.99
6	18	3e-05	0.0026	18.7	5.3	1	23	544	566	544	566	0.97
7	18	5.1e-06	0.00043	21.2	7.2	1	23	572	594	572	594	0.97
8	18	1.2e-07	9.9e-06	26.3	2.7	1	23	600	622	600	622	0.98
9	18	8.6e-05	0.0073	17.3	6.7	1	23	628	650	628	650	0.97
10	18	5e-05	0.0043	18.0	5.8	1	23	656	678	656	678	0.97
11	18	3.8e-07	3.2e-05	24.7	2.9	1	23	684	706	684	706	0.98
12	18	4e-05	0.0034	18.3	8.0	1	23	712	734	712	734	0.98
13	18	3.3e-05	0.0028	18.6	9.1	1	23	740	762	740	762	0.98
14	18	2e-05	0.0017	19.3	7.7	1	23	768	790	768	790	0.98
15	18	1.3e-05	0.0011	19.9	7.1	1	23	796	818	796	818	0.97
16	18	9.6e-05	0.0082	17.1	0.5	1	23	824	846	824	846	0.97
17	18	0.1	8.9	7.6	5.0	1	23	856	878	856	878	0.98
18	18	8.3e-07	7.1e-05	23.6	0.9	1	23	884	906	884	906	0.96

Sequence Information

Coding Sequence: ATGAACACCAATGATCCCAATGCCCTTGCGGGGGCTCACGGGGCAGAAACCTCCGAGGGCACGAGTCAGAGACCGCCGCCGACCACCTCCATACCGACAGATCTTCGCGTGAACACGACAGCGCTGAACGCTGTCGCCCTGAGTAGCGTGGCGAAGTACTGGGTTTTGACGAATTTGCTGCCAGGTCCTATACCGCAAGTGTCGGTCTATGGCTTGCCAGGATCTGGTCGCACCGACAACCAGGGCAAGATCTCGCAGCAGGAGGCCATGCTGGGACAGCACGCGGCGGCGGGCTTGCTACCGGCCGACCCGCTTCTCCTCCAGCAGCATTCCCAAATCCCGGTCAGCATATCGACGTCGCAGGGCGTCACCAATCTGTCGATACCGACGGGGAACATGCACCTGGAGAACAACCACCAGAACCACAACTCCCTCTCGAACCACCAACAGAACGATCCGCTCAATCAGAATCAGATGAATCGAGATATGAGCCACCAGCAGCAGAACCACAACAATCAGCAGAACATGGTGCAAGTCCAAGTGCAAGATAATCTGGTTTCGGTGATCGAGGACAGCAAGGAACAGAAAGATATAATTGCGGCGCAACTGGCCCACGCCCAAATACAGTTGAACGACAATCAACATCTGAATCAGCAGGCCTTGACCGTGCAGCAGTTGCAACATCTCCAGGTGCAACAGGTTCTGGATAACGTGGTGCGGATGGAAAATTCGGTGGAGAACGGTCAGGCCCAGTCGAACCCCGACCAGAACCAGCTCTCCGACAACATCCAGATCGTCAAGGACGAAAAGAACTTGCAGAATTGCAAGCTCCTGTCGGGGACTCAGTTCGGGCTGCAGGACCACAAAGGTGGTAACTTGATGGACGTGCGGACCGCGGACGGCAGCATAGTCAAGATCTCGACGAATCTGCAGGAACAAGATTTGGCCAAGACTCTCGGCGTGGAGATGGTGCAGAACATGTACAAGGTCAACGTGGACGACTTGAATCAGCTCTTGGCGTACCACGAAGTGTTCGGTAAGCTTCAGGGCGAGATCGCGACCACGGGTCAGAACATCGTGCAGAACACCAACACCAACGTGAACATTCAACAGAACACGAACAACATCGCGATCGTTGCGAAGGACGAACAAGAACCGTCGACCAGTTCGTTGCCGAACGACAACACCGCCGCGGTCATTACAGGGAACCATGTCTGTGATCTATGTGGGAAAATGTTCCAGTTTCGTTACCAGTTAATCGTCCACAGACGTTACCACACCGAACGGAAGCCGTTCACTTGTCAGGTTTGCGGCAAAGCCTTCACCAATTCGCAAGAACTGACGCGACACGGAAAGTGCCATTTAGGAGGTAGTATGTTCACGTGCGCCGTTTGTTTCCACGTGTTCGCGAACGCAGCCTCTCTGGAGAGGCACATGAAGCGACACTCGACCGACAAACCGTACAATTGTAACATTTGCGGCAAGTCGTTCGCCAGGAAGGAGCACTTGGATAATCACACGAGGTGCCACACGGGAGAGACGCCGTACAGGTGTCAGTattgtgccaaaacgttcacCAGGAAGGAACACATGGTGAACCACGTCAGGAAACACACGGGAGAGACACCGCATCGGTGCGAGATCTGCAAGAAGTCTTTCACTAGGAAGGAACATTTTATGAACCACGTGATGTGGCACACGGGCGAGACGCCCCACCATTGTACCATCTGCGGGAAGAAGTACACCAGGAAGGAGCACTTGGCCAATCACATGAGGTCCCACACGAACGACACGCCCTTCAGGTGCGAGATCTGCGGGAAGTCTTTCACCAGGAAGGAACACTTCACGAATCACATCATGTGGCACACGGGGGAGACCCCTCACAGGTGCGACTTTTGTTCCAAAACATTCACCCGGAAGGAACACTTGTTGAACCACGTGAGGCAGCACACCGGGGAGTCCCCCCACAGATGCGGTTTCTGCTCGAAATCCTTCACAAGGAAAGAGCATTTGATCAATCATGTTCGTCAACACACCGGAGAGACTCCGTTCAGGTGCAATTACTGTCCCAAAGCTTTCACGAGGAAGGATCATTTAGTCAATCACGTCAGGCAACACACCGGGGAATCCCCTCACAAGTGTACTTTCTGCACGAAGTCGTTCACTCGGAAGGAGCACTTGAACAACCACGTCAGACAGCACACCGGGGAATCCCCTCATCGGTGCCACTTCTGTTCCAAATCGTTCACCAGGAAGGAGCACCTGACGAACCACGTCAGGATCCACACGGGTGAGTCCCCTCATCGCTGCGAGTTCTGTCAAAAAACCTTCACCCGAAAAGAACACCTGACCAACCACCTGCGTCAGCACACCGGCGAGACGCAACACTGTTGCAACGTCTGTTCGAAGCCCTTCACCCGCAAGGAGCACCTCATCAACCACATGAGGTCCCACACGGGGGAGCGGCCGTTCGCGTGCACCGAGTGCGGCAAGTCGTTCCCTCTCAAGGGTAACTTGTTGTTCCACCAGAGGTCGCACAACAAGGGGGCGACGGCCGATCGGCCCTTCAGGTGCGACCTCTGCGAGAAGGATTTCATGTGCAAGGGCCACCTGGTGTCGCACCGGAGGTCTCACAGCGGCGAGCGGCCGCACGCGTGTCCCGACTGCGGCAAGACGTTCGTCGAAAAGGGTAACATGTTGCGCCATCTGAGAAAGCACACGGTGGAGAACGGACAGGCCGCCGCCGACCAGCAGAACATAACAACGAACCAGGTGCAGGCGGCGCCGACGAACAATCAGCCGCAGACTTCGGGGGCCAACCTGCAGATACCGCAAGTCAGCCAGACGCAGCAGACCGCCCCCAGTAACATCGTTACGCAATCGCCGCACTTGCCCATGCATCCGCCGAGCAATCATCCTGTCGTCGTGCCTACAGCGAACGGTAATGTTTTGGCTAGTTACTGA
Protein Sequence: MNTNDPNALAGAHGAETSEGTSQRPPPTTSIPTDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGSGRTDNQGKISQQEAMLGQHAAAGLLPADPLLLQQHSQIPVSISTSQGVTNLSIPTGNMHLENNHQNHNSLSNHQQNDPLNQNQMNRDMSHQQQNHNNQQNMVQVQVQDNLVSVIEDSKEQKDIIAAQLAHAQIQLNDNQHLNQQALTVQQLQHLQVQQVLDNVVRMENSVENGQAQSNPDQNQLSDNIQIVKDEKNLQNCKLLSGTQFGLQDHKGGNLMDVRTADGSIVKISTNLQEQDLAKTLGVEMVQNMYKVNVDDLNQLLAYHEVFGKLQGEIATTGQNIVQNTNTNVNIQQNTNNIAIVAKDEQEPSTSSLPNDNTAAVITGNHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFTNSQELTRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYNCNICGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLINHVRQHTGETPFRCNYCPKAFTRKDHLVNHVRQHTGESPHKCTFCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETQHCCNVCSKPFTRKEHLINHMRSHTGERPFACTECGKSFPLKGNLLFHQRSHNKGATADRPFRCDLCEKDFMCKGHLVSHRRSHSGERPHACPDCGKTFVEKGNMLRHLRKHTVENGQAAADQQNITTNQVQAAPTNNQPQTSGANLQIPQVSQTQQTAPSNIVTQSPHLPMHPPSNHPVVVPTANGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00167784;
90% Identity: iTF_00415298;
80% Identity: -