Tuni039133.1
Basic Information
- Insect
- Temnothorax unifasciatus
- Gene Symbol
- ttk
- Assembly
- GCA_030770225.1
- Location
- JASTWK010002492.1:954407-956786[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 4.7e-06 0.0041 18.0 0.0 8 38 198 228 191 234 0.71 2 5 2e-11 1.8e-08 35.2 0.0 4 43 244 283 242 285 0.86 3 5 0.84 7.3e+02 1.2 0.0 23 35 314 326 298 331 0.78 4 5 8.7 7.5e+03 -2.0 0.0 32 44 340 353 340 354 0.87 5 5 6.9e-10 6e-07 30.3 0.1 4 39 356 391 353 395 0.93
Sequence Information
- Coding Sequence
- ATGACCGACGCTGGCCAATGTAAAGTCAATCAGAGTTATCGCTTTAAATGGAACAACTATCAGAATCATCTGTCCGACGTCGTGCGGCAGCTCTTGAAGGAGGACTGCATGGTGGATGTCACTCTGTCCGCGGCTGGTGAACGTATTCACGCGCATCGCATTGTACTATGCGCGTGTAGCATTTTGTTTCAAGAAGTGCTCAGTCAAGTGACAGAAGATTGTCCAACGATTATTCTAAGTGATATATCACCTCaggatataaaatcaattatcgAATTCATGTATCACGGCGAGATCCGGGTTCCCGTTGAAAATATCAGTAGTTTACTCGAAGCTGCACgatcgttaaaaataaacggTCTCATCAACATAAATGGAATTGAAGAGAACGTGATTGTTAAAAGCAGAAAGGATTCTGCTTCTGTCGCAGAAGAGACTGCGACAGAGGTAGAAAAAGTTGGAGACAATGCTGAAGCCTTGGAGAGTGACTCGCATGAAGCGAGCACTGCTGAAAATtgtatatcaaataaaaagaagaaacgtcGCCGCGAGACTGTGAAGAAAGATTACAACGACGACATGTTGGCGTCTGCGATTAATGACTTGAAATTAGGACAGACTTTAATAGAGGCTGCTACCAAGCACAATATACCACGCTCAACGTTGTACATGCGGGCGAAAGCATTAGGCATACATCTAAACGCATCAAGAAACGGATATCCCGCGGAGTGCATGAATGCAGCTATAAATGCCGTGATCAATGGCTCGAGCTTGCAGCATGCATCAGAGATATTTAGAATACCTAAAACCGTGTTATGGAGGCGTATACAGAAGGAAGGCTATCAGACCCTACGTCCTGAAATGAAGAGGTCGTATGGTTTGGACACGAGACAGGCCGCTGTTAAAGCTTTAGAGAGAGGGGAAAATTTGACGAAAGTTGCTCTGCAATTCAAAATACCAAAGACTACGTTGTTTAGAGAAAAGGCACGGCTGGTAGATCAAGGTAAATTGCCGTTATCGTTTTGGAAGAAACGCAAATCTGAGAATGAGGAATTAAAGAAGTCGCGATTGGAAGAAGCCGTGGCTGCTTGCAAGGGTGGCAGAATGTCGCAAGCCGCGGCATCCATGACGTATCGCATTCCAAAAACTACGATATGGCGAAGGCTTCAACAGGAAGGGAAGAAGGTGGAAAGGTCGTCGAATGCGAAGAAGAAACAACGATTGCCCGATACGCCAGTGCTGCACGACGCTCAGGCGAAGACGCAAGAAACATCCAATTTCAGTTATTGTGAGGTTGCATCGGAAATACCTATAACTTACATAGATGAGGATAGTATACCTGAGGATTCCGTGATAATCTTAACAACGGAGGACATGGACGAACTGAATCTGGAGGGAGGCAggcaaattattgtaaattcgGAATCTGGACAGGAATATATTCCATATACGATAAGTATCGAAGATAGCTCAAACTATTCGGGGGCTGAGAGTTAG
- Protein Sequence
- MTDAGQCKVNQSYRFKWNNYQNHLSDVVRQLLKEDCMVDVTLSAAGERIHAHRIVLCACSILFQEVLSQVTEDCPTIILSDISPQDIKSIIEFMYHGEIRVPVENISSLLEAARSLKINGLININGIEENVIVKSRKDSASVAEETATEVEKVGDNAEALESDSHEASTAENCISNKKKKRRRETVKKDYNDDMLASAINDLKLGQTLIEAATKHNIPRSTLYMRAKALGIHLNASRNGYPAECMNAAINAVINGSSLQHASEIFRIPKTVLWRRIQKEGYQTLRPEMKRSYGLDTRQAAVKALERGENLTKVALQFKIPKTTLFREKARLVDQGKLPLSFWKKRKSENEELKKSRLEEAVAACKGGRMSQAAASMTYRIPKTTIWRRLQQEGKKVERSSNAKKKQRLPDTPVLHDAQAKTQETSNFSYCEVASEIPITYIDEDSIPEDSVIILTTEDMDELNLEGGRQIIVNSESGQEYIPYTISIEDSSNYSGAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01423555;
- 90% Identity
- iTF_01405898;
- 80% Identity
- iTF_01409321;