Tnyl041053.1
Basic Information
- Insect
- Temnothorax nylanderi
- Gene Symbol
- kn
- Assembly
- GCA_030848795.1
- Location
- JASTWM010001548.1:1542802-1548201[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-38 1.9e-34 120.2 0.0 43 115 8 80 4 91 0.96
Sequence Information
- Coding Sequence
- ATGCGATATCTAATTGATTATAGGGTTGGCGTGGGCCGGGCACATTTCGAGAAACAACCGCCGAGTAATCTGAGGAAGAgcaattttttccatttcGTGATCGCCCTTTACGATCGACACGGCCAACCGATCGAGATTGAGAGGACGTCGTTCATGGGCTTCGTCGAGAAGGATCAGGAGTCTGAAGGTCAAAAGACGAACAATGGTATTCAGTACAGTCTACATCTGCTCTACTCCAATGTGGGGCCACGTAATAGCCCCATCCGTAGCGATGATGATGGGCCATCGACATTCCACACGGACACCCGGTCTCTTAAGGCCGCTAAAAAGCCCAGGGACTTTCGAGGCCCGGGCGCAACAGAGACATATTTTACGTCGCTGGCCCAGGCGTGGCAAAAAGGGTCCCTCTTCCGTCTTGAAGAAGCGCACGAATGTGCGCGCACGGAGACGGGGCGCAAAGAGGGATGA
- Protein Sequence
- MRYLIDYRVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNVGPRNSPIRSDDDGPSTFHTDTRSLKAAKKPRDFRGPGATETYFTSLAQAWQKGSLFRLEEAHECARTETGRKEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00128751;
- 90% Identity
- iTF_01408845;
- 80% Identity
- -