Apic004304.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- kn_2
- Assembly
- GCA_003063865.1
- Location
- NJRM01000001.1:1018370-1030757[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.7e-40 3.1e-36 125.3 0.0 39 117 20 98 13 106 0.94
Sequence Information
- Coding Sequence
- ATGAGACAGATACTGAAGGAGGAACCTGTGCCACGTGCTTGGCCGCAGCCCGCGCTCGCCGACAACGGAACGGTTGGCGTGGGCCGGGCGCATTTCGAGAAACAACCGCCGAGTAATCTGAGGAAGagcaattttttccattttgtaATCGCCCTTTACGATCGACATGGTCAACCGATCGAGATTGAGAGGACGTCGTTCATGGGCTTCGTCGAGAAGGATCAGGAGTCTGAAGGTCAAAAGACAAACAATGGTATCCAGTACAGTCTGCATCTGCTCTATTCCAATGGCAGTGGGGCACGTAATAGCCCCATCCGTAGCGATGATGACGAGCCATCGACATTCCACACGGACACCCGGTCTCTTAAGGCTGCTAAAAAGCCCAGGGACTTTCGAGGCCCGGGCGCAACAGAGACATATTTTACGTCGCTGGCCCAGGCGTAG
- Protein Sequence
- MRQILKEEPVPRAWPQPALADNGTVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRHGQPIEIERTSFMGFVEKDQESEGQKTNNGIQYSLHLLYSNGSGARNSPIRSDDDEPSTFHTDTRSLKAAKKPRDFRGPGATETYFTSLAQA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00127972; iTF_00129515; iTF_01423432; iTF_00127234; iTF_01405477; iTF_01408845; iTF_01407953; iTF_00126489; iTF_01407016;
- 90% Identity
- iTF_01408845;
- 80% Identity
- iTF_00129515;