Tnyl011194.1
Basic Information
- Insect
- Temnothorax nylanderi
- Gene Symbol
- retn
- Assembly
- GCA_030848795.1
- Location
- JASTWM010000102.1:89709-95149[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 4.3e-14 53.9 0.1 29 89 4 62 1 62 0.93 2 2 8.6 3.6e+04 -3.5 0.0 11 28 175 191 170 193 0.68
Sequence Information
- Coding Sequence
- ATGGCAAAATCCGTATTGGATCTGTTCGAGCTTTACAAGTTGGTGGTACAGCGAGGTGGATTGGTCGAGGTAATCAACAAGAAGCTGTGGCAGGAAATCATCAAAGGTCTCAAGCTGCCAGCGAGCATCACTTCCGCCGCGTTTACTTTGCGAACTCAGTATATGAAGTATCTGTATCCATACGAGAGAGATAAGGAAGCGCTGTCGACCCAAGAACAGCTCCAGACAGCGATCGAGACGAATCGTCGTGAGAGCCGCAGGAACAATTACAATTACGGTAACAACGACAATCTAGTGACACGCAATCAGCACAATTCGCTGCCGCAGAATCCGATGCCGTTGCCGATCTCCATCGCCCAAATGGCGGTAGCTGCGAACGAAGCGTCGCAGCATCACGTCGTGAATGGTGGACATCCGCATGCTGCGCAACACCATCCGCACGCTCCGCCGCATCTTCCACCAAACCTTTATCATATTTTACCTCTAATTTCGAACATGTACACAGTTTCAGAGTACATGATGAGGCTACTGAGAGACAGAAGCACAATTCCCAATAATCCGATGATCCAAGGTAGCACATCGACACCACCGCCGACAACGGCGGAGGGAATTAAATCCGGACTGCAATTCTGGAATATATACAGTCAAGCCAATAGTAATATCTATCCAGCGATGGGACAGCCAGCCTTCTCTCCAACGTCGTCCCACTCGCCATTGGTACCGGCAAATAGCCCCGAACAGAGAGAGGCCTTGGATCTCGCAAACTCCGGAAACAGATTGGATTCGGTATCCTCTCCAAACGCTAGTAGATCCGTGAGTTCACCACCGGAAGTTTCGAATCCAGAACTGAAGAGAAGTCACGAGGCTGCTGAACTCTTATCTCCGTCTATTAAAAGAATGATGTTATCTGATGAGGAGGGAAATAATATACACTCCCTGCGCATTAGACAGCAGGTTAGCACACGAGaaaGTGGACGAAGAGAACTAGAAATTAGTGTAAATATTGATGGTATTTTGTATGAAGGTGTCCTGTCAGTTAAACGTAGTGAGAGTAATAATGAGAGCAGTAGTACTCCGTCAAGCcctaataataatgataaacgGGCACAAAATAACGAATCGTGA
- Protein Sequence
- MAKSVLDLFELYKLVVQRGGLVEVINKKLWQEIIKGLKLPASITSAAFTLRTQYMKYLYPYERDKEALSTQEQLQTAIETNRRESRRNNYNYGNNDNLVTRNQHNSLPQNPMPLPISIAQMAVAANEASQHHVVNGGHPHAAQHHPHAPPHLPPNLYHILPLISNMYTVSEYMMRLLRDRSTIPNNPMIQGSTSTPPPTTAEGIKSGLQFWNIYSQANSNIYPAMGQPAFSPTSSHSPLVPANSPEQREALDLANSGNRLDSVSSPNASRSVSSPPEVSNPELKRSHEAAELLSPSIKRMMLSDEEGNNIHSLRIRQQVSTRESGRRELEISVNIDGILYEGVLSVKRSESNNESSSTPSSPNNNDKRAQNNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01407951;
- 90% Identity
- iTF_01407951;
- 80% Identity
- -