Basic Information

Gene Symbol
-
Assembly
GCA_004794745.1
Location
QBLH01002549.1:194801-204456[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 32 7.3e-06 0.00057 19.7 1.1 1 23 211 233 211 233 0.98
2 32 0.0075 0.59 10.3 3.7 1 23 256 279 256 279 0.96
3 32 0.00051 0.04 14.0 0.5 2 23 286 308 285 308 0.96
4 32 0.0024 0.19 11.8 0.1 1 21 328 348 328 349 0.95
5 32 0.0066 0.52 10.4 0.1 2 23 447 468 446 468 0.95
6 32 0.048 3.7 7.7 0.4 2 23 475 497 474 497 0.88
7 32 0.00016 0.012 15.6 0.2 1 23 568 591 568 591 0.96
8 32 0.044 3.5 7.8 2.9 1 23 597 620 597 620 0.95
9 32 0.1 7.8 6.7 1.5 1 23 633 655 633 655 0.97
10 32 2.9e-05 0.0022 17.9 0.9 3 23 700 721 699 721 0.96
11 32 2.4 1.9e+02 2.4 0.4 1 23 754 777 754 777 0.92
12 32 0.081 6.3 7.0 0.7 2 23 784 807 783 807 0.94
13 32 0.75 58 4.0 0.0 2 23 816 838 816 838 0.90
14 32 0.022 1.7 8.8 0.0 2 23 845 867 844 867 0.93
15 32 7.4e-05 0.0058 16.6 3.2 1 23 875 897 875 897 0.97
16 32 0.025 1.9 8.6 1.4 2 23 934 957 933 957 0.94
17 32 0.00017 0.014 15.4 3.3 1 23 960 983 960 983 0.97
18 32 0.00057 0.045 13.8 0.1 2 23 990 1012 989 1012 0.96
19 32 0.00076 0.059 13.4 3.9 1 21 1039 1059 1039 1060 0.95
20 32 0.0022 0.17 11.9 1.8 2 23 1074 1095 1073 1096 0.93
21 32 0.3 23 5.2 1.1 1 23 1099 1122 1099 1122 0.94
22 32 0.022 1.7 8.8 2.1 2 23 1129 1152 1128 1152 0.90
23 32 2.5 2e+02 2.3 0.2 2 23 1160 1182 1160 1182 0.94
24 32 1.2 91 3.4 0.0 2 23 1189 1211 1188 1211 0.91
25 32 0.19 15 5.9 2.7 2 23 1220 1242 1220 1242 0.96
26 32 0.57 45 4.3 0.5 2 23 1248 1270 1247 1270 0.91
27 32 0.014 1.1 9.4 0.1 1 23 1332 1355 1332 1355 0.95
28 32 0.00014 0.011 15.7 1.1 1 21 1382 1402 1382 1403 0.95
29 32 0.27 21 5.4 1.9 2 23 1505 1527 1504 1527 0.94
30 32 0.76 59 4.0 0.4 2 23 1534 1556 1533 1556 0.94
31 32 0.8 62 3.9 1.6 1 23 1567 1589 1567 1589 0.90
32 32 6.5 5.1e+02 1.0 0.8 1 20 1593 1612 1593 1614 0.92

Sequence Information

Coding Sequence
ATGGCGACGATATCGATgactacgacgacgacgatgacaacgtcgacgtcgacgtcgacggcaACAGCGATGGCGAACGAGCCAAAGAAATCTTATGACGAGCTGTGTCGCCTGTGCGCCTCCTACGACGCCGTTAGGATGCACATATTCGGCCAGGAAGGCAAGAATCGCCAGCTCGTCGACAAGATCCAGACGTGCTTGCCGTTCAAGGCGAGTGACGATGGCGCAAATGACAGCGCACACGTCGGCGAGGTGCACGCGGAGCTTCTTAAAGGGAAGGAAAATATGCCAGTACTTATTCCGGAGGCACCAGTGGTCAATCCTAATGCGGCATTAGGTACACCACCGAGATTAAATTCGGATGGTGAAGCGGATCCCGAGATCGAAGAGATTCTCGACACGAGTGAAGGTACGGATGAAGCTACAGTAATCGACGATTCGGAAGATCGACGATCGGAATACGAGATGGCATACGAGATGGACATGGAGACGAATCCTAGCGACTTTTTGGAAATGACTCCAATGGTAACCGAGGAAAATGAAGAGGAGTGCGGTACGAACAACCCGAGTGCCGCGAATACTCAAGATACCGCGGTCTTTTCACATACGCAGCCGCAAAAACATGAAGTCTTTGTCTGTTCCCTATGCAACAAAGCGTTCAGTTCCAAGGGTCACTTGTCTCTGCACGCGAGAATTCACGTGGGTGAGGGTGATGTGATCGGCGAAAGAGTAATCACCGATGACCATACTTCGTACCAACGACCATATCAATGTGATCTTTGTCATAAATCGTATTCTACTGCGAAACATCGCTGGGGGCACGTTTCTACGACACATCGGGGACATCCTGCGGTAACGTGTGCATACTGTTCTCGCATATACTCGACGCGATATAATCTCGATGAGCATATAAAATCACGACACGCTGGTCTACCGCCACCTCCGGAATTGTCAGTCTCCCTTTCGCGCACAGAAACTCGTTATCAGTGCCAAACATGTCCAATGGTGTATACGGATTTAGCAGATTTCAATGCGCATCGGCAGATATGCACACAGGAACAACGTACAGATCTGTTGGGGCAAACCGAAGCGCAGAACAATAAGATTTTCGCCGACACGTCCGATATCTCGAGTATATATTCGGATGACGAGAACAAAGACTTCAGGAACGCCGAGGCTAAATTGGCGAAAAATCCGCAATTAACTATATTGAAACAAGCGCTGACTAAAGGAGACAGTCTAAAACGAAATTTTGACGATGATGGGTCGACATCCAGCAGCAAGCCGAAAAAAATAGTTAAGTCAgAGGAGGGCGAGACGAGTCCTCAGAAGAGGTGGTATTGTGAAGCTTGTCCACAAAGTTTTACATCGGTGGACAGTTTGAAGGAGCACGAGATTAGGCACGATGCCGAGAAACCATTTATTTGCATACTGTGCAAGAGAGATTTTGTTTTGAAATCTTCATTAATTAGGCACATTACATTGTCACATGGCGTTGATCCTACTCCCATCATTGACAGTGATAAGTGTTTAAAAACAACGGTAATGCCTCAAAATTGGAACGATCGAGTGGACGTCAGTGTTTATGAGCAAAGTGAAACGAAAGAACCACCAGAGCTCTCGTCATCACCTGAGataaatttagaaaatgatGACAAGGATTATAAGAACAATCACGAGAATATAGAAATCGAAACGGTATTTGTATGTGAGACCTGTAAGAGAGACTTCAATGACCGAGCGTCATTATGGCTACACATACGAGCGATGCATAAAGAGTACGCTGCATTTACCTGTGGAGTGTGTTTAAAGATGTGCTTTAATAATACGCAACTTCAAAATCATGTCTATATGTATCACGGAAGGTCTAAGCTTTTAATATCGGAACAAAGAAGGTACAGTTGTACGATATGCGGTAGACAGCATGACTCGAGAAAAAAGCTAATCACTCATGTCTCGATACATAATGTCGATCCTGCCTTTGATCCTGCgaattttgtacaattaaatagtaattattataatgaaaactTGAATGGTAACGAAGGAAATGAACAAGCATTAGATTTTGACGGAGACGATGGCGAGAAGGTCGATTGTTACATTTGTTATAAATCTTTTCCGACTGAGGATCATCTTATACGACATCAGAGAAATGCTCATAAGTCTGACCAGATAGTTTCATTAGGAGAAGCTGCGGGTAGTGGAAATACTCTTAGTGTCAATGGTAATGGCAACAGGGCGCagtatcatttattttttgtttgcgAGGTATGCGGTAGCTCACATTCGAGCAAATGGGAACGCTGGTTGCATATCAACAATACGCATAACAACGAATCTTCTATTAAATGCGAATGGGAAAATTGCGGAAAGATATTCGCGACGAAGTTGTTGCGCAACGAGCATCTCCAGCATCATGTGGTACAAGGACCCTCGCCTAACACTTGCGAGATATGTGGGAAATTGTGGCCTACTCGCGTCGATTATTGGAAACATGTGATGGGCGTACACGCGGACACAGTGCCTCTAATTTGCGGTGTTTGTCTGAAAGTATTTTCTGACGTTATGCAATTAAGCGCACATGTCAAGGCGAAACATTGGCCACTAACCAGTGGTGATTTCTGTTGTGATATTTGCGGTAGACCGTACTCCAATAAATCAAAGATGTCTCGGCATAGAAAGATCCATGGGTTGGAAGCGGCTATGGACGCCGCATGCGATAATAGCAGTTTCAATGAAACGACCAATGAATCGGTTAAGCCTGATCACAACAATGGCGCTTCGGAAATAGAATTAAGTTGCGAGCAGTGCCCAGAACTCACCTTCACGACATTGGACAGTTTGTGTAATCATCGACGGATAACACATGGTCTTTTCCCGTGCGATTTGTGTAACAAATGCTACGGCAGAACGTCACACTTGTGGAAGCATGTGAATAGAGTGCATAAAGGACACGCGGATGTGACTTGTCCTTACTGCGCAAAGACAAGCGCGTCAAGGGATCATCTGGCAGCACATATTGCCAAAATTCACAGGTACATGCCCGCAATGGGTAAGGATAATCAGAACTGCGTCGCTTCCAAGTCCCTGAGTGTAGACGACGGTGTCTTGCATTATTGCGAGAAATGTAACAAGGGATTCCACAAGCGCTATTTGCTCCGTCGTCACATGAAAGGCTGTCAAAACTATCGTAAAGATCCTGGTGCATTGTTAACTCGTTGTCGGGCCTGCGAGAGGATATTCAAGGATCGTGCGAGTCTACAGAAACACATTGAGAATCATCACAGCACGTACACTTGCCATTTGTGTAACGAAACGATCACTTCCAAGCTAGGTATCATGACACACAACCGCGTCAATCATATGGATCACCCGGATCTGACGTGCGACCATCCAAGTTGTAAAAAACTCTTTCGGACTAAAGAAGATCTGGAATCTCATCGAAAGGATCACAAGTATCACAACAATCCGAACGTTTGTGATTTTTGCGGTGACACCGTGGAAAATAAGCTGAAACTGAAAATGCACGTATTATCGTTGCATCGAAACGAGATCGGAGTATCCTGTGGTGTCTGCCTGATTCCGATGAAGGACCCCAAAGATTTGAAGAAGCACGTGGAATCCGAGCACAGCAGCGTTCTTTCTAATCCAAACACGTGTCAGGTATGTGGCAAGCAATATGCATCCAAGTGGAAGGCTTTCGATCACACGAAGAAATGTCACGGCAAGGTCTTCCTCACGTGCAAACAGTGTCTAGCGGTTTTCACGGATGAAAACGATATACGCGATCATTACGAGCATGTGCATAACGTTCCGAAGGACCAATTAGCCATTTTCGAATATAGAATGGATATTGGTGCAAAGAGAGAGGGTTACGAGACTCCCGATATTATTGTGAAGGAGGAACCGGATGACTTGGAGTTCGACGAGGAAATGTGTGACGAGAGTTCGAACGACTCTCGTAAACGTAGAAGATCGCCAAACGACACATACGATTGCGAGATGTGTCCCGAGATCTTTCTCAATTCGGACACTCTTGCCAAACATTATCAGAACGTCCATAACACCGACCCCGTCCGTATGTTCAAGAAATTCAAAAAAGATAGCGATAGCAAGCGCAAAATGAAAAACAGAAACAACTTCGAATGCAAGAATTGCAAAAAGCAGTTCTCCACCAAGACCTTATTTTGGAATCACATCAATGTATGTACACGGCGAAACTCGATAGGTAGATTTGACACCCCAAATAATGTCCCGACATCAATTCTGGAGTCTCATCTGAAACAAAACAATCAGATTCAACGAGAAGAACTGTCGCTACCACCGACGAACGAATCCAACTTGAACATTCCCGACTTCAATCTATTCgaagatattaatttgcaattgtcGGCTCAGAAACCTGTGCCGAATCTTATGCCATTGTCGCAGATGAAGACAGGTAACAACGGCAAATGCTCGAGAAAAGACTCACGCAAGGTGTATGATGAATCGACCAATACTGAGTGCACGTGCGAAGTCTGTGGTAAGCAATGGCCCGCCAAGAAACATTTGTGGCAACATCTGATTCGTTTCCATCGCGCCGAAGCTGCCGTTACGTGTGGCGTATGCTTGAAGCTGTGTAAATCTTATCAAGATCTGGCCGACCACTTGAAGGCCGAGCATGCTCCTGTTTTGTCGCCGGAGGGCAACAATTTCACTTGTAAGATATGCGGTAGATATCACAACGCGAGAAGCAAATTGAACTTGCACACGGGCATCCATATTGGGAACCACCAGTGTCAAAAGTGCCTGCAATTTTTGGAGAGCGAGGAAAAACTCACCGAGCATACAACGAGCTGTAATGGCAAATCTGGGTTTGAAGATCACGCAGTGGCGGACGAAGATAACGCGAAAAACGATAACGACGAAAAGGGTAGTTTAATCGCCGACGAGACATCGGTCATCGAGGGAACAGAGGAAGCGGATTTCGAATCGGAAGGCGAAGGGAGTAGGGACATTCACGATGAAGAAAATTCGGACAATAGCGAAGAAGACAATTCGGAAAATAGCGATGATTCGGATAGTGATAGTAATAGTAGTTCGAGCGAAGACGAAAACGAGAACGAAGatggagaggaagaggaggaggaagaagaaaatgaaaacgaTAATGATTCTGATACAAGATCCACTAGTCGAGAGAGCGGCGATAGTGTATCGTGTAATTCCGATAGCGACGACGAATCGGATATGGATGACGCGGAAGTGAACGCGACGGAAAATAAAGCGCTACAATTGAGCGATATCGGTAGATTCAGGATACCCGGTGACGGTATTCAAGAGAATATGCCGATGGAGAAGAATTCCAAGGATCAGAAAACCTATCTTACGTCCGTTACCTCAGCGACGGTTGCAGAACAAACTGGACAAAGTAATTTGAAAGATCTGTTGATTCCCAATGCACCTGCGAACATGGACAAATTTGAAGCATTTCGTCTCTGGGAATCCGCTAAAGCTGCGGCGAACGATGTAGACTTGTCTGTGTCTGACGATAACGAAGACGATTGTGATAACGAGGTAGACGATGAGGAAAATAATGATGAAAACGAGGAAGAAGATGGTGAAGTTGGTGGCGAAGATGAAGACGAGGATGAAGGTGAAGCTgagactgacaatgagactGAGGCCGATGAAAGTGAAAATGAGAACGAAgccgagaaagaggaagaagaggaggaagaggaggaggaaaatgaagatgatgacgacgacaacgacgacgacgacgacgtcggaCCGCCTGTATTAAGTCCAATAATGCCTTTGTTACCAGAAAATGAATCTGAGGAGCACAGCGGCACGGCAGATCGCACGAGGCACAAGCTCAGTCCGATGGTTTCGCTGAGTATTACTAAAGAGGAGTGTGATCTGGAGGAGTGTGAAATGACCGAAATGCCAAATGATGTGGAGAACGTATCCAACGCAGCCAACCTCTTCGCGGCTAATAACAACGATCTGCCCGTAACGTGGGACGAGAACTTGGATGATAACGGAATCGACACGGGCGATTGCAACTCCGACATTGGAGACAGGGATATGGAGAAAAACGAGGAATTCAGTAAGGAGTATATCAAAATAGAAGTGAACCAGAACGATGCTTTTGAAGAGAATTCCGTGAAAAACGAGGAGGAATTCAGTAAGGAGTATATCAAAATAGAAGTGAAGCAGAACGATGATTTTGAAGAGGATTCCGCGTATGAGAACGTAGTGGATAATAGTAGAGGTGACGGAGACAATCAAGTGCACGAGGTGCATAATCTGGACGGAGCTGTGCTAATGGTGACTACTAATGAGGGTAATCAGATTTTGATAGAACCAAACGTGTTGAATATGGATAACGAGGACTCTAATGCCGAAGCAACGCAGTATATTTACCCAGAGAACGCTTACGAGATCGAGGAAGAGGATTATGCGACGCGAAATGAAACCGACGTCATGCAGACGGATGAGATGCAAGGCAGTATGTCCTACGTTCAAGATACATCGGAGAATGAGGATAGTACGGAGGTTGACATCGAGGAGTACAGCAGTGACGTGCAGAAACAGTAG
Protein Sequence
MATISMTTTTTMTTSTSTSTATAMANEPKKSYDELCRLCASYDAVRMHIFGQEGKNRQLVDKIQTCLPFKASDDGANDSAHVGEVHAELLKGKENMPVLIPEAPVVNPNAALGTPPRLNSDGEADPEIEEILDTSEGTDEATVIDDSEDRRSEYEMAYEMDMETNPSDFLEMTPMVTEENEEECGTNNPSAANTQDTAVFSHTQPQKHEVFVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHAGLPPPPELSVSLSRTETRYQCQTCPMVYTDLADFNAHRQICTQEQRTDLLGQTEAQNNKIFADTSDISSIYSDDENKDFRNAEAKLAKNPQLTILKQALTKGDSLKRNFDDDGSTSSSKPKKIVKSEEGETSPQKRWYCEACPQSFTSVDSLKEHEIRHDAEKPFICILCKRDFVLKSSLIRHITLSHGVDPTPIIDSDKCLKTTVMPQNWNDRVDVSVYEQSETKEPPELSSSPEINLENDDKDYKNNHENIEIETVFVCETCKRDFNDRASLWLHIRAMHKEYAAFTCGVCLKMCFNNTQLQNHVYMYHGRSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAFDPANFVQLNSNYYNENLNGNEGNEQALDFDGDDGEKVDCYICYKSFPTEDHLIRHQRNAHKSDQIVSLGEAAGSGNTLSVNGNGNRAQYHLFFVCEVCGSSHSSKWERWLHINNTHNNESSIKCEWENCGKIFATKLLRNEHLQHHVVQGPSPNTCEICGKLWPTRVDYWKHVMGVHADTVPLICGVCLKVFSDVMQLSAHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIHGLEAAMDAACDNSSFNETTNESVKPDHNNGASEIELSCEQCPELTFTTLDSLCNHRRITHGLFPCDLCNKCYGRTSHLWKHVNRVHKGHADVTCPYCAKTSASRDHLAAHIAKIHRYMPAMGKDNQNCVASKSLSVDDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCDHPSCKKLFRTKEDLESHRKDHKYHNNPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLKKHVESEHSSVLSNPNTCQVCGKQYASKWKAFDHTKKCHGKVFLTCKQCLAVFTDENDIRDHYEHVHNVPKDQLAIFEYRMDIGAKREGYETPDIIVKEEPDDLEFDEEMCDESSNDSRKRRRSPNDTYDCEMCPEIFLNSDTLAKHYQNVHNTDPVRMFKKFKKDSDSKRKMKNRNNFECKNCKKQFSTKTLFWNHINVCTRRNSIGRFDTPNNVPTSILESHLKQNNQIQREELSLPPTNESNLNIPDFNLFEDINLQLSAQKPVPNLMPLSQMKTGNNGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLADHLKAEHAPVLSPEGNNFTCKICGRYHNARSKLNLHTGIHIGNHQCQKCLQFLESEEKLTEHTTSCNGKSGFEDHAVADEDNAKNDNDEKGSLIADETSVIEGTEEADFESEGEGSRDIHDEENSDNSEEDNSENSDDSDSDSNSSSSEDENENEDGEEEEEEEENENDNDSDTRSTSRESGDSVSCNSDSDDESDMDDAEVNATENKALQLSDIGRFRIPGDGIQENMPMEKNSKDQKTYLTSVTSATVAEQTGQSNLKDLLIPNAPANMDKFEAFRLWESAKAAANDVDLSVSDDNEDDCDNEVDDEENNDENEEEDGEVGGEDEDEDEGEAETDNETEADESENENEAEKEEEEEEEEEENEDDDDDNDDDDDVGPPVLSPIMPLLPENESEEHSGTADRTRHKLSPMVSLSITKEECDLEECEMTEMPNDVENVSNAANLFAANNNDLPVTWDENLDDNGIDTGDCNSDIGDRDMEKNEEFSKEYIKIEVNQNDAFEENSVKNEEEFSKEYIKIEVKQNDDFEEDSAYENVVDNSRGDGDNQVHEVHNLDGAVLMVTTNEGNQILIEPNVLNMDNEDSNAEATQYIYPENAYEIEEEDYATRNETDVMQTDEMQGSMSYVQDTSENEDSTEVDIEEYSSDVQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01355612;
90% Identity
iTF_01405951;
80% Identity
-