Tlon010555.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- PAXBP1
- Assembly
- GCA_004794745.1
- Location
- QBLH01002549.1:58437-71890[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-30 6.1e-26 91.2 3.1 2 272 513 722 512 724 0.92 2 2 0.045 2.9e+02 0.4 0.0 40 93 1155 1208 1132 1219 0.87
Sequence Information
- Coding Sequence
- ATGTCATTGTTCAACAAACCGAAGCGGAACATACGCCGACGCCCTTTCAACGATGAAGACGAGGATAATGAGAACAGAATGGAGGTGGAGGACGCGCAGCCGgtcaaaattaaaacgaaGAAGGATAAGCCAAAGCAGACGCGTCTCAGCTTTGGAGAGGAGCTGGAACAAGGGGACGACGGAGAAGTTTTTATAGTCAAGAAATCGTCGAGGAGCAAAAAGCTGATGAAACAGCTAGATCATgaaaggaggaaaaagaaaggtgAAGAGAAAATGCAAGTGGACACTGAGCAAGCGAATAAATCCATTAAGCAGGAAaaagatttagaaataaagaCAGATGATCTAGTAGTGAAAGTAAAAAACACAGGACCGCTGATCTTAAACGGACGAGCTGCATTGGCAGCAGGAAAAGATGACTATACGTCGGgTGGATGTATACCTGATGCCGCTATGATACATGCAGCGAGAAAACGCAGACAAAAAGCAAGAGAATTGGGAACCGATTACATTCCTATTGAAGAGCAGAGCGATGATAAGGGCAAGTCAAGACTAATACGGGAGGAAGATCATGATCGAAGTGATGATGATGATTCTCAAGATCGATTAGATATGACTGTCAACACTGAAGCGCGtgataaagaaaagagaagagaagcaTTTCTTGCTTCTCAAGTTccgttaaaattttcaGATAATGAAAGTGAACACGAGAACGAAGAAGAGGAGTGGGAAGCTCAACAAATACGGAAAGGTGTAACGGGTGCTCAGATTGCAGCAGCACAGCAGGATTCAATGTTGCAACAACAATACACAATGGGTATGAATGTTAATCAGATGATNGGGTCTGGTGTACCTTTAGAAATGGTATTAATGCCtgcaccgccaccgccaccgtcCATTCAACCACCAGATCCAACAAAAATTGTACCTGTTACACCACAAGAAGTTGTGAACAGAATGCGCACAAGgtTGGATAACTTAAAAGAGGTACATAGACGACATCAGCAAGATCAGGAACGTTTAGAGGGAGAATTACAGCAAACCATGAAAGAATTGGACGAAAGCGAAGTTCGTACGCCGCATTACGCACAACGCTTCAGATATTACCAAGAGTTGCGTGGGTATGTCACTGACTTGGTAGAGTGTCTTGATGAGAAGCTTCCCCTGGTCATCGATTTGGAACAACGCTGGTTAGATCTGTATGGCGAACGTTCAACCGAATTAATGGAACGAAGACGACAAGACACTAGAGATCAGGCTGAAGAAATAACTACCGCAGCAAGAGGACAAGCCATGAGAAGAGGACCGGAAGTGGAAGTACACGTACGACGAGCTGCAGAGAGAGAGGGTAGAAGAGCCCGTCGCAGAAGAGCAAGAGAATTAGCTTCAAATTTGCCAAAGCATATTGATGGAATGTCTAGTGACGATGAAGTCACTGAGCAACAGAATCTTGTATTTAAGCAAGCGAAAGAtgaaatcgataataattgtaaagatGTATTTTCTGACGTTATGGAGGAGTATTGTACAGTACGTGGCATCCTTTCAAAATTCGAATCATGGAGAGAAACAGACATGGACGCTTATACAGAAGCTTATGTATCGTTGTGTTTACCTAAAATTATTTCGCCCATTATCAGATTACAACTAGTTACTTGGAACCCAATTATggaAAGTGCTGATCTAGAGAGGACAAAATGGTATAATACGTTGCTTCTGTACGCTTTAAATAGTAAAGAAACAGAGGAGTCATTGAAACGAGATCCAGATGTTAGATTGATACCATCgacaattgaaaaaattgtgataCCAAAATTGACATctattatcgaaaaaatatgGGATCCAATGTCAACGTCTCAGACATTACGTCTCGTAGGAACTATAAATCGATTGATTAAGGAATATCCTAATTTGAATGACACCAGCAAACAATTGGAAACTTTATTCAACgctattttagataaaattaaggCTGCTATTGAAAATGATGTTTTCATACCTATTTTCCCAAAACAAGTTTGGGATACGAGACATCAATTCTTTCAAAGACAATTTGCGATGGCTGTCAAATTATTGCGGAATTTATTAAGTTGGCAAGGTCTTCTTGGGgatgtacaattaaaaaatttggctCTTGGTTCGCTTTTGAATCGTTATCTGCTTGCTGGATTACGAGTTTCCTGTTCAACTGATGCTTTATTCAAAGCAAATATGATTATGAGTACGCTACCAAGGGCATGGTTACAAGGAGAAACTATTGAACACCTCAAAATGTTCGCCACACTTATTCAACAACTTAGCGAACAGTTAGATCAAGCAAACCCTGCACACAAATCTGgaaaagaatatgtatattcttaCAACGCCACGTCGAGCACTGGTGTGCTGGTACCTTCCAACGCAGCTTCTTCATGGAATCTCAATGGAAAACTCGTAATTCAGGCGGAAGATAACTATGTCACAGTACAGTTGCAATCATTGAAGATGAACATGTATAATGGAGATGTAAAAGAGGTAGTAGAAGGTATCGATATCTATGATGACGCTTTAGAACTTTTGAAACCTTTTCGTTTATCGTACAACAAAGGACTCATCGAAAACTTTAGCACCGAAGCTGAACCTGCATGGGCGACGAATATAAAACGGAGCATAGCTggaattttacaattagatctttttaatttggaaAAGGAGAGCGCATTTCATTCTACCGAAATAAATCATTATGGAAAATGTGATATTGATTACGTTGTAAGCCCGGAAGGCGAAACTCAGCgtttaataatgaaatcgTTAGATCCTCGGATATGTATTGGGCATCCAAGTCGCAATTGGTCGAACGTTCCTAAAGTACAATGCACTGATGAGGATCAAAATCCCATCTTGAAAAGTAGCGAGAGAGTATATCGATTAAAAACCGATGGATTCATTCACGAAATCATCTCCGTTAATGCATCTGGAAGCATCTACGTGCAACCTTTTCAAAGTATGGGAGAGGCGCACTATAATTTGGTTCAACAAAATATTGAGTTATCTTCAGTGAGGGATACAGCAAATAAGATAGTTAcgaataatttacaaactACAGTCCTTCAACATGAGTTACCAGAAGCGGATCTCACACAGGGTAGAGGGACACcggataaaagttttatttttaaatctATAAGTCGTTTATTAGATCGTTTAAGCCACAGGCTCGAAAATCCTGGTTTGGATACCGAGATTCATAATCTGCACAACACAACGATATCCGTGCTTCTCTATTATCTCGGTATGTTAGATCGCGTTGATCTAGGAAAAGCCTACACTCGAATCTCGGGAACTAGTTATAAAGAGGAAACGATACGAAACATGTTTCTCGAAGCGCTGCCACAAGTTGGAAGTGAAGAATCTGCGCTTTTTATATTGGATCTTATTCAGAGTAACAAAGTATCGGACATATCTGCGATTCAATTACTTATGCGGCTACCATTTCACGTAAGAAAACTCGATGTTCAACTGCTGGCCAGCCTCGAACCGCTTCTTACCCTCCCAAGGAAAATCTCCACGAAGGTGCAAAATACCGCGATTCTGACCTACGGaacattaatatacaaaacttGTCTAGTTTCTTGTCCGTATGAGATGTTAGATGATTACGTACGTCGGTACCTCAATAAATTTACAGAAACTACCCAGTACGAGCAGAAGATGGTCTGGTTGGAAGGTTTGGCAAATATACAGCTGGGTAGAGTTGTTGAGTTCTTAGAGCCTATAGCTAGCGGCAATAATGCTGAATCACGACATTTTCGAGTACTAGCAGCTTGGGCCTCTATTCCCACAGCACCATTGAGGCCCGATGTTattTATCCTGTGTATTGGCCAATCTTGCTCAATAGAACCGAGCATTTGGAAATGAGAGTCGCTGCGTTAACTTTGCTTATTGTTTCTAGCCCTACATCCAACAGATTGATATCTCTATATTGtaGAATGTGGCCAAGTATAAAGTTTGCCTTAATTGGACTGCATTTCTTGGATTACTTCACTTATGTGCCACCAAAAGGTAGCTGCGGATTAGCTGCTTATATCGAGGCACTCAAATCTGGACCGTCTCAGACAAGATTGGAATACTTGAAAAGTGAAAATCgtcatattttatctttgacaCATCACGACCTACAATCTTCGCAAATTCTTCATCAATGGAATATAGCTGTATTATACGAAGCCACCAGCTGGTTGTCGGatgtgattaaatttaaagcgaCCAAGATTGTGCCTGGTGAACGCATATTTaagTTTTGCGTAGAGGCCGAAAGACACGTGCCGTGGCAATGGGAGATTTTGAGTAACGAACCGAGTGAATCCtctcgtattaaattaaatgtcgtTTGGGGGCTGTCTGATAATGCGAAAGGAAAATGCAGCGGATCCTCTATATCGTTGAACTTAATTGGTGAAATTAGCAGAGAGCAGCTCGAGAAAAGTAAAAGGACAAGTTGGCCCTACGGTGAATGCAAAAAAGAATCTGCAGGAAAGAAAATCGTTCCTTATACGAATTCTTGCTACGAAGTATCGAGAGAATTATCAACCTTgcgaagatataaaatatttgcaaaatatgaaaacTTACCAGAGAGTTTGTCCAAGCTAGTCTGGAAAATGTATGCCTTGTACGATCTTATCGGTGGAAATAGCAGTATCGCAAGAAAGTCTAATGAACTCGCGATAATCGCGATTTTTCCGAAAGAATCAAATGTTGGCGAATTGCAACTTAACGGGGACAAAGTTGCAATTGAATACAATTCGTATTACATTGATCTTTTCTTGACACGAACGAGAATTCATAAGTATATGGAAGCACCTTTATTTAGGATGTTTTCTAGTACGTAA
- Protein Sequence
- MSLFNKPKRNIRRRPFNDEDEDNENRMEVEDAQPVKIKTKKDKPKQTRLSFGEELEQGDDGEVFIVKKSSRSKKLMKQLDHERRKKKGEEKMQVDTEQANKSIKQEKDLEIKTDDLVVKVKNTGPLILNGRAALAAGKDDYTSGGCIPDAAMIHAARKRRQKARELGTDYIPIEEQSDDKGKSRLIREEDHDRSDDDDSQDRLDMTVNTEARDKEKRREAFLASQVPLKFSDNESEHENEEEEWEAQQIRKGVTGAQIAAAQQDSMLQQQYTMGMNVNQMXGSGVPLEMVLMPAPPPPPSIQPPDPTKIVPVTPQEVVNRMRTRLDNLKEVHRRHQQDQERLEGELQQTMKELDESEVRTPHYAQRFRYYQELRGYVTDLVECLDEKLPLVIDLEQRWLDLYGERSTELMERRRQDTRDQAEEITTAARGQAMRRGPEVEVHVRRAAEREGRRARRRRARELASNLPKHIDGMSSDDEVTEQQNLVFKQAKDEIDNNCKDVFSDVMEEYCTVRGILSKFESWRETDMDAYTEAYVSLCLPKIISPIIRLQLVTWNPIMESADLERTKWYNTLLLYALNSKETEESLKRDPDVRLIPSTIEKIVIPKLTSIIEKIWDPMSTSQTLRLVGTINRLIKEYPNLNDTSKQLETLFNAILDKIKAAIENDVFIPIFPKQVWDTRHQFFQRQFAMAVKLLRNLLSWQGLLGDVQLKNLALGSLLNRYLLAGLRVSCSTDALFKANMIMSTLPRAWLQGETIEHLKMFATLIQQLSEQLDQANPAHKSGKEYVYSYNATSSTGVLVPSNAASSWNLNGKLVIQAEDNYVTVQLQSLKMNMYNGDVKEVVEGIDIYDDALELLKPFRLSYNKGLIENFSTEAEPAWATNIKRSIAGILQLDLFNLEKESAFHSTEINHYGKCDIDYVVSPEGETQRLIMKSLDPRICIGHPSRNWSNVPKVQCTDEDQNPILKSSERVYRLKTDGFIHEIISVNASGSIYVQPFQSMGEAHYNLVQQNIELSSVRDTANKIVTNNLQTTVLQHELPEADLTQGRGTPDKSFIFKSISRLLDRLSHRLENPGLDTEIHNLHNTTISVLLYYLGMLDRVDLGKAYTRISGTSYKEETIRNMFLEALPQVGSEESALFILDLIQSNKVSDISAIQLLMRLPFHVRKLDVQLLASLEPLLTLPRKISTKVQNTAILTYGTLIYKTCLVSCPYEMLDDYVRRYLNKFTETTQYEQKMVWLEGLANIQLGRVVEFLEPIASGNNAESRHFRVLAAWASIPTAPLRPDVIYPVYWPILLNRTEHLEMRVAALTLLIVSSPTSNRLISLYCRMWPSIKFALIGLHFLDYFTYVPPKGSCGLAAYIEALKSGPSQTRLEYLKSENRHILSLTHHDLQSSQILHQWNIAVLYEATSWLSDVIKFKATKIVPGERIFKFCVEAERHVPWQWEILSNEPSESSRIKLNVVWGLSDNAKGKCSGSSISLNLIGEISREQLEKSKRTSWPYGECKKESAGKKIVPYTNSCYEVSRELSTLRRYKIFAKYENLPESLSKLVWKMYALYDLIGGNSSIARKSNELAIIAIFPKESNVGELQLNGDKVAIEYNSYYIDLFLTRTRIHKYMEAPLFRMFSST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868098;
- 90% Identity
- -
- 80% Identity
- -