Tlon005474.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- bab2
- Assembly
- GCA_004794745.1
- Location
- QBLH01002019.1:88364-125059[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-12 8.3e-10 37.8 0.0 1 39 455 494 455 498 0.90 2 4 6.7e-13 5.1e-10 38.4 0.1 2 39 510 547 509 550 0.94 3 4 9.8e-19 7.4e-16 57.1 0.0 1 45 564 609 564 609 0.97 4 4 1.8e-18 1.3e-15 56.3 0.1 1 42 616 658 616 659 0.97
Sequence Information
- Coding Sequence
- ATGCAGAAAACCCCTATACCTACCTATCTaccctctgtctctctttctctctctttttttctttttctctctctccctctctcgtcATCTTTCTTTCGCGCTCGCGTGGATACCGTCCCCCGTCCGGTACATAAAACCTCTTGGAGATATCTTCTCCCGGCGGCCGTGGCGGAAAAAGAAACCCAATATTTCATGGAGACAGATCGTTATTGGGGCGTGCACTACAGCGGCGGTATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAATATGACGTCGGTGTTCCACCAGCTCCTGCAGACCGAGGCCTTCGTCGACGTCACCCTGGCGTGCAACGAGGCCTCATTAAAAGCGCACAAGGTGGTGTTGTCGGCCTGCAGCTCCTACTTCCAGAAGCTCCTGCTGTCGAACCCCTGCAAACACCCGACGATCATCATGCCGCAGGACGTCTGCTTCAACGACCTCAAGTTCATCATCGAGTTCGTCTACCGCGGCGAGATNGACGTTTCGCAAGCGGAGCTTCAGTCGCTCTTGAAGACGGCCGACCAGCTAAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAACAGGGACGGTCCGCCACCCGTGAGCCTGAGCTCGCCGCCGAGGGAGTCCGGCACCCCGAGGTTGAACTACACGAAGCTGAAGAAGCACCATCAGCGGTACAAGAGACCCAGAATCGAGCGGCCCGCGTTCGAGCCGCGCGCCACCGATCCGAGACACTACGATCGCTACAAAGAGGAGGAGGCCAACAACGATTACAGCCGCGATAACAAAGAGAACCATCGGGACTGGCAGGCTGAAGATGAAGAGTGCACGGagacagcaacagcagcagtaGCACTGGAAACTTGCcagcgtaataataataacaataacaacaacaacgGTAACGGCACGAGTAACAACGGTGACATGTTCTGTCACACAGGGCTAGGGCACTACGGCCACCATCCGGATCCCGGAGAGGTCGATTTGCCCCCCGAGACCCAACCCACCCCACCCAGCGCCACCCTGGTCGGCACCACCATCACTCACCTGAGGGACCCGGATCATCATACAGAGATTCAGAACTGCGACAGCGTCAAGATCAAGTTCGAGACGCTGCACACGATGGACTCCTCCGACACGATCGACATAGACAGCCACATGTCGGATCGGGCGAGCGTGAGCTCGAAAAACGCCGCCGACAGCGACAACATGATGATGATAACACCGGAGTTGCTGGGACTGATGCCGTCGGGAAGCTCCGGCCAGTCGGACTCGGGCGAGAACAATTCGAGGGGGCACAGCGGACAGTCGAGCTCGCATCATCACGGTTCAAAATCGTGGACGCAAGAGGACATGGACGCGGCTTTAGAGGCGCTGAGAAATCACAACATGAGCCTGACGAAAGCTTCAGCAACATTCGGTATTCCCTCGACGACTCTGTGGCAACGGGCACATCGATTGGGCATCGACACGCCGAAGAAAGATGGCCCCACGAAATCCTGGAGCGACGAGAGCTTGAACAACGCTTTAGAGGCGTTACGCACCGGCTCCATTTCGGCTAACAAGGCATCCAAGGCGTACGGCATACCTTCCAGTACATTGTACAAGATCGCCAGGAGAGAAGGCATCAGGCTGGCCGCGCCGTTCAACGCGAGTCCCACTACGTGGACGCCGGCCGATCTGGACCGCGCCCTAGAAGCAATAAGATCTGGTCAGACCTCCGTGCAGAGAGCGTCGACGGAATTCGGTATACCTACGGGGACTCTATACGGAAGATGCAAACGGGAAGGAATCGAGCTTAGCAGGAGCAATCCCACGCCGTGGAGCGAAGACGCTATGACTGAAGCTCTCGAGGCCGTCAGATTAGGGCACATGAGCATAAATCAAGCGGCGATCCACTACAATCTACCGTATTCGTCACTGTACGGGCGCTTCAAGAGAGGCAAATACGAGGAACCCGTCGTCGGCGACCTCTCGCAGGATGGCACCAGTCCGCATTTCCATCAAAGCCCCAACCAGAATCACTCGTCCGCCCTTCCAGATCAAATGCCTTATCCGGGCAGCTGA
- Protein Sequence
- MQKTPIPTYLPSVSLSLSFFLFLSLPLSSSFFRARVDTVPRPVHKTSWRYLLPAAVAEKETQYFMETDRYWGVHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEXDVSQAELQSLLKTADQLKIKGLCEVPENRDGPPPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPAFEPRATDPRHYDRYKEEEANNDYSRDNKENHRDWQAEDEECTETATAAVALETCQRNNNNNNNNNGNGTSNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSGQSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDLSQDGTSPHFHQSPNQNHSSALPDQMPYPGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00141914;
- 90% Identity
- iTF_01520386;
- 80% Identity
- iTF_01406660;