Tlon001833.1
Basic Information
- Insect
- Temnothorax longispinosus
- Gene Symbol
- retn
- Assembly
- GCA_004794745.1
- Location
- QBLH01002038.1:220937-246271[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-27 1.2e-23 82.8 0.0 1 89 10 96 10 96 0.96 2 2 1.7 3.7e+03 -2.1 0.0 8 28 193 216 191 218 0.61
Sequence Information
- Coding Sequence
- caGTTGTACGAGCTGGACGATTCCGCCGAACGGAAGGCATTCCTCGACAACCTCTTCAGTTTCATGCAGAATAGAGgaaCGCCCATCAGCCGACTTCCCATCATGGCAAAATCCGTATTGGATCTGTTCGAGCTTTACAAGTTGGTGGTACAGCGAGGTGGATTGGTCGAGGTAATCAACAAGAAGCTGTGGCAGGAAATCATCAAAGGTCTCAAGCTGCCAGCGAGCATCACTTCCGCCGCGTTTACTTTGCGAACTCAGTATATGAAGTATCTGTATCCATACGAGAGAGATAAGGAAGCGCTGTCGACCCAAGAACAGCTCCAGACAGCGATTGAGACGAATCGTCGTGAGAGCCGCAGgaacaattacaattacggTAACAACGAAAGTCTAGTGACACGCAATCAGCACAATTCGCTGCCGCAGAATCCGATGCCGTTGCCGATCTCCATCGCCCAAATGGCGGTGGCTGCGAACGAAGCGTCGCAGCATCACGTCGTGAATGGACATCCGCATGCTGCGCAACACCATCCGCACGCTCCGCCGCATCTTCCACCAAACCTGTCAAGTAGTCAACTTTCAGAGTACATGATGAGGCTACTGAGAGACAGAAGCACAATTCCCAATAATCCGATGATCCAAGGTAGCACATCGACACCACCGCCGACAACGGCGGAGGGAATTAAATCCGGACTGCAATTCTGGAATATATACAGTCAAGCCAATAGTAATATCTATCCAGCGATGGGACAGCCAGCCTTCTCTCCAACGTCGTCCCACTCGCCATTGGTACCGGCAAATAGCCCCGAACAGAGAGAGGCCTTGGATCTCGCAAACTCCGGAAACAGGTTGGATTCGATATCCTCTCCAAACGCTAGTAGATCCGTGAGTTCGCCACCGGAAGTTTCGAATCCAGAAGTGAAGAGAAGTCACGAGGCTGCTGAACTCTTATCGCCGTCTATTAAAAGAATGATGTTATCTGATGAGGAGGGAAATAATATACACTCCCTGCGCATTAGACAGCAGGTTAGCACACGAGaaagtGGACGAAGAGAACTAGAAATTAGTGTAAATATTGATGGTATTTTGTATGAAGGTGTCCTGTCAGTTAAACGTAGTGAGAGTAATAATGAGAGCAGTAGTACTCCGTCAAGCcctaataataatgataaacgGGCACAAAATAACGAATCGTGA
- Protein Sequence
- QLYELDDSAERKAFLDNLFSFMQNRGTPISRLPIMAKSVLDLFELYKLVVQRGGLVEVINKKLWQEIIKGLKLPASITSAAFTLRTQYMKYLYPYERDKEALSTQEQLQTAIETNRRESRRNNYNYGNNESLVTRNQHNSLPQNPMPLPISIAQMAVAANEASQHHVVNGHPHAAQHHPHAPPHLPPNLSSSQLSEYMMRLLRDRSTIPNNPMIQGSTSTPPPTTAEGIKSGLQFWNIYSQANSNIYPAMGQPAFSPTSSHSPLVPANSPEQREALDLANSGNRLDSISSPNASRSVSSPPEVSNPEVKRSHEAAELLSPSIKRMMLSDEEGNNIHSLRIRQQVSTRESGRRELEISVNIDGILYEGVLSVKRSESNNESSSTPSSPNNNDKRAQNNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01407951;
- 90% Identity
- iTF_01407951;
- 80% Identity
- -