Basic Information

Insect: Teleopsis dalmanni
Gene Symbol: Hr39
Assembly: GCA_002237135.5
Location: CM026972.3:89604234-89608954[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.54 8.3e+03 -2.8 1.3 76 150 94 168 33 191 0.48

2 5 3 4.6e+04 -5.6 7.5 84 172 167 268 103 272 0.52

3 5 3 4.6e+04 -12.8 18.7 65 150 271 360 199 420 0.59

4 5 1.6e-15 2.4e-11 45.0 2.4 1 142 487 637 487 645 0.56

5 5 4.8e-81 7.3e-77 260.8 0.2 184 408 643 857 636 857 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.54	8.3e+03	-2.8	1.3	76	150	94	168	33	191	0.48
2	5	3	4.6e+04	-5.6	7.5	84	172	167	268	103	272	0.52
3	5	3	4.6e+04	-12.8	18.7	65	150	271	360	199	420	0.59
4	5	1.6e-15	2.4e-11	45.0	2.4	1	142	487	637	487	645	0.56
5	5	4.8e-81	7.3e-77	260.8	0.2	184	408	643	857	636	857	0.95

Sequence Information

Coding Sequence: atgtcgGCAATTAAATCCGAAAAATCAGCAGTATCGGCAGCTCCCAATGCAAAGACTTCCGCTACTCATTTTTGTAATGTCATACCTGGTACTGGCTATCATTTACCCTTAAACATGAGCAGTCATTCTACATCAACGTCGCTTACAACAACTACGATACGAAATAATGTGTCGGTGACAAATATAAAATGTGAAGTGGATGATGCAAGCACGCCGAATGGCAATGTTGTACCTGTTATTGCTACAGTTGCGCCTAACATGACCTATTATAATAACTCAGCAGGTGGCGTAGGTATACGCATACCAGTTACGAAAACTGAAGATTCCGATTCCGAAGCGGAGTTAACCAATATTGAGAATCAGAAAGTTACTCGTAGAACAAGTGCAGGCAATGTCAGTGTTAGCAGCGCgactgcaataaataaaaatggaccACGGCCAATGTCGTGGGAGGGAGAACTTTCGGAGACAGAAACAACTGAAACAGAGGTAATGGATACTGAAAACTCAACGAGTATAAGTTTGCGCACAAGTACTAGCACTGCGAGTGGTTGTGGTAGTGGCATTTCTGTTATTAAAAGTGAAGCAACAACTACTACGCATACTCCAGGTCAGCAACATACACCACATCAACAACCGCGCACACGACCATCAACGATCAAACCAGAATTGGAGCAAATTTGTGTTGATATACATAATTCATCTATTTATTCGCACCACACGAAGCTGAAGTTAGCACCTACGCAAAGTGATCCCATCAATCTAAAATATGAACCTGAGGCGAGTATGAATTCGCCATTGCTAGCTCGTAACAAATCGACAAATTTACCACTTCCAGCAAATCCGAGTCCTGATTCCGCCATACATTCCGTTTACACGCACAGTTCGCCATCACAATCTCCGCTTACATCACGACATGCACCGTATACACCCTCGTTGAGTCGCAATAACAGTGATGCATCTCATAGTTCATGTTACTCGTATAGTTCCGAGTTCAGTCCCACCCATTCACCTATACAAGGTCGTCATGCGACTCCATCATCGACTATGTATCCTAATTTTAATGGCTCTTTGCATCATTCCGTTTTGTACCGTCCTATATCCGTAGAAAATGGTAGTAATGCTACCGTGTCTGAAGTACAAAATCTTTCCATGGACGCACAAGTGCCACCTCTAAGTGTCGGCACCACAGACAGTACTTTACCATCATCAGCTGCAGGTATTTCCAGACAGCAGCTGATAAATTCACCGTGTCCTATTTGTGGGGATAAAATTTCTGGTTTTCATTACGGCATTTTTTCGTGTGAGAGCTGTAAAGGCTTTTTCAAGCGGACAGTACAAAACCGTAAAAACTATGTTTGTGTGCGAGGTGGACCTTGTCCGGTGAGTATATCAACACGCAAAAAGTGTCCAGCTTGCCGTTTTGAAAAGTGTTTACAGAGAGGTATGAAACTGGAGGCTATACGAGAAGATCGCACTCGTGGCGGTCGATCTACTTATCAATGCTCATACACACTACCCAGTTCAATGCTCAGTCCTTTACTTAATACTGATCAGCAAGTTCAAAGcatatcaacagcaacaacaacaaatcaacAATATCAGCAGCGTTTGAGCGGTACGAATACAATCTCTAACATGGGAGTAACGCATTCCGCATCAAACGGCTGTGTATCCAACAGTGGGCAAACTTTCAAAACAGAACAGAGCGATTGCTTAAATGTCAGCAGCGACAATGCACTCAATGGCAGTAGTAATGCGGCAACTACTACGCGTGCAACCAATATACCAGTTCTGTTGCAAGAAATTATGGATGTAGAACATCTTTGGCAATTCAATGAGGGTGAACTAACACGTGTAAATCAACCGCTGTCATCATCGTCTTCGTCTCATGCAACAACATCCTCCACTAACCCAACCGGAACCAATCAGGTGACTAATCCACTGCTGGCCAGTGCAGGTTTTGGGAATGGTGAGAACACCAATCCAGATTTGATAGCGCATCTGTGTAATGTGGCTGATCATCGGCTCTACAAAATTGTCAAATGGTGTAAAAGTTTgccactttttaaaaatatttcgATTGACGACCAGATATGTCTGCTTATTAATTCGTGGTGTGAGCTTTTACTGTTTTCATGCTGCTTTCGTTCGATAGACACACCGGGCGAAATAAAAATGTCGCAAGGCAAAAAAATAACGCTCACCCAAGCAAAATCAAGTGGTCTGcagGCCTGCATTGAGCGAATGCTTAACCTAACTGACCATTTAAGACGCTTACGTGTTGATCGTTATGAGTATGTAGCGATGAAAGTGATAGTTTTGCTACAATCCGatACATCCGAATTACTAGAACCAGTAAAAGTACGTGAATGTCAGGAGAAAGCATTACAGAGTTTACAAGCATATACGCTTGCCCATTATCCAGAAACGCCGTCCAAATTTGGCGAGTTACTGTTGCGCATACCTGATTTGCAACGGACGTGTCAACTTGGCAAGGAGATGTTGACTATAAAATCTCGTGACGGCGGCGATTTCAATTTGTTAGTGGAGCTGTTACGTGGGGAACATTGA
Protein Sequence: MSAIKSEKSAVSAAPNAKTSATHFCNVIPGTGYHLPLNMSSHSTSTSLTTTTIRNNVSVTNIKCEVDDASTPNGNVVPVIATVAPNMTYYNNSAGGVGIRIPVTKTEDSDSEAELTNIENQKVTRRTSAGNVSVSSATAINKNGPRPMSWEGELSETETTETEVMDTENSTSISLRTSTSTASGCGSGISVIKSEATTTTHTPGQQHTPHQQPRTRPSTIKPELEQICVDIHNSSIYSHHTKLKLAPTQSDPINLKYEPEASMNSPLLARNKSTNLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQGRHATPSSTMYPNFNGSLHHSVLYRPISVENGSNATVSEVQNLSMDAQVPPLSVGTTDSTLPSSAAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCPVSISTRKKCPACRFEKCLQRGMKLEAIREDRTRGGRSTYQCSYTLPSSMLSPLLNTDQQVQSISTATTTNQQYQQRLSGTNTISNMGVTHSASNGCVSNSGQTFKTEQSDCLNVSSDNALNGSSNAATTTRATNIPVLLQEIMDVEHLWQFNEGELTRVNQPLSSSSSSHATTSSTNPTGTNQVTNPLLASAGFGNGENTNPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGKKITLTQAKSSGLQACIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTSELLEPVKVRECQEKALQSLQAYTLAHYPETPSKFGELLLRIPDLQRTCQLGKEMLTIKSRDGGDFNLLVELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01404970;
90% Identity: iTF_01404970;
80% Identity: iTF_01404970;