Tdal015975.2
Basic Information
- Insect
- Teleopsis dalmanni
- Gene Symbol
- lrrfip2
- Assembly
- GCA_002237135.5
- Location
- CM026970.3:136978754-136992139[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.14 3.2e+03 -1.5 2.2 198 296 9 107 2 117 0.57 2 3 7.1e-114 1.6e-109 367.2 29.5 2 299 226 518 225 519 0.92 3 3 0.21 4.8e+03 -2.2 4.1 220 244 547 571 523 592 0.47
Sequence Information
- Coding Sequence
- ATGGATAGTAGTAGCACTGTAGGAAGACGTCGGGGTAGCGCTAAAGTTAATGCTGAGGACCAGGCATTGGATCAAATAGCAAAAGAGGTAAATCTTAATATAAaattaaataataatgaaaaagatgAAGTCATCGAGGAGTTTAACTTTAGTGATAGTGATTTATTGGATGACAATAACGATAATAAAGACCATGTCTGCGCGTTAACTGCCAATTCTATATCGACTACCACAACTGCACTTGATAACAATTGCGAACATTTTCAAGATAACCATACAAAGAGCACTGATATGAAAGTCGATGCATTCAGTAAAGAACAAAATTTGTcacaaagtaattataaatttgaaccTACAATTAGTAACGATAAGCTCAAAAATATACCTAAGAATCTAGAACTAAATGAAGAAACGCTAGCGGAAGTTGCAGTAGACTCATTTTGCCCTATAACACCAAGAGAAATAGTAGATGTGGGAGAAAAAGAATCTGATTCATTCACGCAAAGTAACCTCATGAAAAGTGGTAGTTGTGCCAGTGTAGGAAGAATCAAAACTACATGTGATAAAAGTAACGAAAACGATAAAAATGCAGATGATGATCTTTGCGATGAATACGACATTGATCCTGACGAAGAGTTATTAGTACAATTTTTGGGAGAAGCAAACGATATTACTGAGGCTCGATTGGCTGCCCGCAGACAGGCTCGAGCAGAAGCGCGCGAAATACGTATGCGTGAATTAGAACGACAACAAAAAGAACAAGAGCAAAACGCAGATCGTATATATGATATGCATACAGCGTCTGGTATAGATCCTGTATCAAGATCGCGACTAACGTCAGGAATTGGTGCATCCCCAATGAGTTTACTCAACAGCACGCGTGGGAACTCAATGTCTTCGAGGCGCAGTAGTGAAGATTCTTTAGAAGAAGAAGGCCGCAGTTTAAGAGATATACGGCATGAACTAAAggATGTTGAAGAGAGATTTAGAAAAGCAATGATAGCCAATGCTCAATTAGATAATGAACGAGCTTCTCAAACTTATCAAATTCAACTGCTTAAAGACAAACTAGAGGAAGTTGAAGAATCCTATGCTCAGTTGCAGCGAGAATTTAAGGATAAGTCACGCGATTACAACACATTAAAGCGAAATTTAGAAAAACTTACTGAAGAGCTTCGGCTTGTTGAAGGCCAATTAAACGAACGTGATACATTAATTGCGGAACAAGGTTTAGTTATAGTTGCTGTCGAAAACGATGATGGTACCGATGCTAAACGTGCTCTAGTCAGTGCGGAGAACGCTCAACTACTTGGTTCAGTTCAAGGGTCCTTagacgTTAGACTTAAAAAATTTAGCGAAGAAAAACAACAGCTTATAAGTGAAGTACAGCAATTACAGGAACAATTAGAAGTTTATAAAAGTCAAGGAAAAGGTCGTGGTAGCTCTGCAAATGGTCCCTTAGGTTCCGAAGATGATTATGAGGCACAAAggGAAGCTAATAAAATCATATCAgactgtaaatataaattacaaaaagcgGAACAGGAAATAGCTAGTCTGCAAGCAAGTTTAGCGCGCTCTGAAACTCAAGTAATAAGATATAAAAGTACAGCCGAAGCGGCAGAGAAAGCGGAAGCAGAACTTAAAATTGAAAGAAGGAAATTACAAAGAgagAATCGTGAGGCTATGGAACGTCTTGAAGAACTTGAAACATcaaataatcatttattaaaaagactAGATAAATTAAAGAATGCTAAGAGCGCGTTATTGAAAGACCTTTGA
- Protein Sequence
- MDSSSTVGRRRGSAKVNAEDQALDQIAKEVNLNIKLNNNEKDEVIEEFNFSDSDLLDDNNDNKDHVCALTANSISTTTTALDNNCEHFQDNHTKSTDMKVDAFSKEQNLSQSNYKFEPTISNDKLKNIPKNLELNEETLAEVAVDSFCPITPREIVDVGEKESDSFTQSNLMKSGSCASVGRIKTTCDKSNENDKNADDDLCDEYDIDPDEELLVQFLGEANDITEARLAARRQARAEAREIRMRELERQQKEQEQNADRIYDMHTASGIDPVSRSRLTSGIGASPMSLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNERASQTYQIQLLKDKLEEVEESYAQLQREFKDKSRDYNTLKRNLEKLTEELRLVEGQLNERDTLIAEQGLVIVAVENDDGTDAKRALVSAENAQLLGSVQGSLDVRLKKFSEEKQQLISEVQQLQEQLEVYKSQGKGRGSSANGPLGSEDDYEAQREANKIISDCKYKLQKAEQEIASLQASLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMERLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -