Tdal037998.1
Basic Information
- Insect
- Teleopsis dalmanni
- Gene Symbol
- sip1
- Assembly
- GCA_002237135.5
- Location
- CM026972.3:89970333-89975365[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-89 4.7e-85 286.9 14.8 2 275 398 666 397 666 0.97 2 2 0.08 1.2e+03 0.1 0.1 241 272 677 708 668 711 0.82
Sequence Information
- Coding Sequence
- ATGTCAGATGATGGTTTTGAACGCTTTGAAATTACGGATTACGATTTAGACAATGAATTTAATCCGAATCGCCCGCGCCGCAAATTGTCGaagaaacaacaaatatatgGCATATTTGCGGATGATAGCGACAACGATGATTATCACCTAAGTCGTGGTCGCCGTAATAACCGTGGTGGAAACGCAAAGGACTACACTGCACCAGTTAGCTTTGTAGCTGGTGGCGTGCAACAGTCTggtaaaaagaataaaaatgttgaagaacCGGAAGATGATCAAATATCTGATGATGAGTACGAGCGTCCCACATTTGGAAATAAGTCAGGGCAGCTAATGGGTACTGCTAATAGCAGTAATGAGTCGTCGGATGGTGAAATCTATGCGTCGCAAGtgctaaagaaaaattatgaacGCAAATCAACTGGTCGCGTTGGCGCTTGGGAACAACACACTCGCGGTATTGGTGCAAAGTTACTTTTGCAGATGGGCTATGAGCCTGGCAAAGGTTTGGGTAAAGACTTGCAAGGTATTTCACAACCGGTAGAGGCTTTTGTACGTAAGGGACGTGGTGCTATTGGTGCTTATGGTCCAGAAATGAAAACTAGTGTTAGTGAAAGACCggaatcaattaaaaatgaaaatgtgcgTGAGTCTAAACACAATAAGCAAAAGATTAACAAATGGAAAAAGGGTACGGATGGAGGACATCGTAATCAAAACTATCACTGCTTTAAAACTGCTgaagaaataattgaaagaGGCAAGAACTCTAAAAACAATATGCCGGATAAGTTAAGtaAACAGTTAGGCAATGTTCCTGTGATTGACATGACTGGTCCCGAAAGACGCGTACTGAGTGGTTATCATGCCTTGGCACATACGCGTGTGATGGACGAAGATATCTATGAAGTTAAAActgatttgaaaaataaattagccTCACAGGCATCTAATGTTTTTGATATGCCAGAACTCAAAcataatttgcaattaattgttGACTTATGCGaacaacaaattatagcaaCCCATACATCATTGCGTACAGCAGCGGACAATGAGTCGTACTACGAGTATCAGTTAAAATCGTTAAGAGAGATTATGGAACGCGAATACAATTACATAAGCACGTTGGAAAATGTGTCAAGTCTGGTGTATGAATTGGTTATTGATGACTCTGATTTAACCATAGAACGCACTgagcatttatttataaagctaCAACAGGTGTTTGGTACCGAGTATAAGGAATTTAAATTGGCTGATTTAGCAGCTGGTGTGGTTGGTCCGCTTCTAAAACGGCATTTGGATGCGTGGCAACCACTAGAACAACCTACACAATATATCGACCTGATAAAGAAATGGAGTACTATATTGGAAGTAAAAGACGAAAATGAAGTCTTGGCTCgaaatatttttgatccttATTCTTCCATTATATGGGTTGGTGTTATACCAAGTTTCCGCGCATGTGCTGGCAACTGGAATCCAAAACAATATCAACCAATGGCTGCTTTGTTAGATGCTTGGGCACCATTATTTCCTAGTTGGATTTTGGACTCGGTTTTAGAGCAGTTAGTACTACCAAGACTCACCCGGTCCATTCGTGAGTGGGATCCACTTACTGACACAGTACCCATACATATATGGATTTTACCCTGGCATAATGTTTTAGGTTTTAAAATGGAAGAGTCTGTGTATCCAACAATTCGTGAGAAATTAGGATTTGCTTTACATGGTTGGATGCCACATGACCGTTCGGCACGTGCTATGCTATTACCATGGAAAGGTGTGTTCAATGTATCAGAGATGCAAGAGTTTCTTGTAAAACATATTGTGCCTAAACTGCAAATGGTGCTTAGTGAGCTAATCATTAATCCACTTGATCAAAAGTTAGATATGTGGTACACGGTTTGGGAATGGTATGAAGTACTTCCTCTAAAGGTAATGACGCAGTTGTTGGAGAAGTCTTTCTTCCCGAAATGGATGCAGATGCTAATTATATGGCTTAATCAATCACCAAATTATATTGAAGTGACTCGTTGGTACGCTGGCTGGAAGTCTATGTTCCCAGCAGAATTTCTAAACGAACCAAATATCAAAGACATATTCCGTCGTGCTCTTGAAGTAATGCATCGTGCAACAGATAACACTGACAAGCTCACATCGTTTGAGTCAAAATCTGCACAACCGCCAGCACAAGCACCTCCTCCACCGGCTCTAATGGACATACAAATAACAAAACCTATACAGCTTGAGTTTAAACAGGTCGTTTCACAAAAGTGTGCAGAGCTTGGTATCCTGTTTGCTCCACTACCTGGTAGACGCGAATTAGGAAAACAGATTTACCGCGTCGGAAAACTTTATTGCTACATTGATCGAAACATTTGTATGATCAGTGAAAATACACAAAGCAGTTGGAGGCCTATTGGGTTAAGTCAAATGCTTGATAGAGCCATGACGGGCGTTATCAATTAG
- Protein Sequence
- MSDDGFERFEITDYDLDNEFNPNRPRRKLSKKQQIYGIFADDSDNDDYHLSRGRRNNRGGNAKDYTAPVSFVAGGVQQSGKKNKNVEEPEDDQISDDEYERPTFGNKSGQLMGTANSSNESSDGEIYASQVLKKNYERKSTGRVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGISQPVEAFVRKGRGAIGAYGPEMKTSVSERPESIKNENVRESKHNKQKINKWKKGTDGGHRNQNYHCFKTAEEIIERGKNSKNNMPDKLSKQLGNVPVIDMTGPERRVLSGYHALAHTRVMDEDIYEVKTDLKNKLASQASNVFDMPELKHNLQLIVDLCEQQIIATHTSLRTAADNESYYEYQLKSLREIMEREYNYISTLENVSSLVYELVIDDSDLTIERTEHLFIKLQQVFGTEYKEFKLADLAAGVVGPLLKRHLDAWQPLEQPTQYIDLIKKWSTILEVKDENEVLARNIFDPYSSIIWVGVIPSFRACAGNWNPKQYQPMAALLDAWAPLFPSWILDSVLEQLVLPRLTRSIREWDPLTDTVPIHIWILPWHNVLGFKMEESVYPTIREKLGFALHGWMPHDRSARAMLLPWKGVFNVSEMQEFLVKHIVPKLQMVLSELIINPLDQKLDMWYTVWEWYEVLPLKVMTQLLEKSFFPKWMQMLIIWLNQSPNYIEVTRWYAGWKSMFPAEFLNEPNIKDIFRRALEVMHRATDNTDKLTSFESKSAQPPAQAPPPPALMDIQITKPIQLEFKQVVSQKCAELGILFAPLPGRRELGKQIYRVGKLYCYIDRNICMISENTQSSWRPIGLSQMLDRAMTGVIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01404897;
- 90% Identity
- iTF_01404897;
- 80% Identity
- -