Tluc003941.1
Basic Information
- Insect
- Teleiodes luculella
- Gene Symbol
- -
- Assembly
- GCA_948473455.1
- Location
- OX419592.1:211321-232351[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.6 1.2e+02 4.0 0.3 2 23 6 27 5 27 0.96 2 14 0.013 0.91 10.7 1.4 1 23 982 1005 982 1005 0.93 3 14 7.1 5.1e+02 2.0 0.3 1 23 1093 1115 1093 1115 0.89 4 14 1.4e-05 0.00098 20.0 0.5 2 23 1118 1139 1117 1139 0.96 5 14 0.0002 0.014 16.3 3.2 1 23 1145 1167 1145 1167 0.99 6 14 0.0062 0.44 11.6 7.9 2 23 1174 1195 1173 1196 0.94 7 14 0.68 49 5.2 1.0 5 23 1209 1227 1208 1227 0.96 8 14 0.00055 0.039 14.9 1.0 3 23 1234 1255 1233 1255 0.97 9 14 0.035 2.5 9.3 0.0 3 23 1277 1296 1276 1296 0.97 10 14 0.00015 0.01 16.8 1.2 1 20 1302 1321 1302 1324 0.91 11 14 0.0051 0.36 11.9 2.1 1 23 1332 1354 1332 1354 0.99 12 14 0.006 0.43 11.7 7.2 1 23 1360 1382 1360 1382 0.98 13 14 7.4e-06 0.00053 20.8 1.4 1 23 1388 1412 1388 1412 0.98 14 14 0.001 0.072 14.1 5.5 1 23 1418 1440 1418 1441 0.96
Sequence Information
- Coding Sequence
- ATGGATCAACTCGTGCAGTGCCCTGTGTGCACTCTCTTCCTTCACAATGGAATGTCCCTGGAGTCCCACCTGGACACCCACCCTAAGGACCAGGTCATCACAGCCTTGTGTAATTTATCTAAAAATGCTAATTACAGTAGTAGAACTCCTACTCCTTTGCATTCTGAGAGATCTTACAGAAGTAGATCTCGCACTCCAGCTACTGAAGATAGTGCATTAAAGTGGAGTGGGTCCCGTGGAGGGGACCATGAGCGCTACTGGAGGAGGACGCCCAGCAGAACCCCTCGACCATCAACCTCATCGAGAGTGAACACTCCTGCTTCAGCAGAAGTTAACTTTGACAATAGGTCCTTGAATAACAACTCTGGTTCATACTCTAACTCTCCCTATCCAATGAAAATGGATAAAACGGCGCAAACTCAAGCTTATATTCATAATCCTCCATTATCAGAGTTTGATACGCAGTATGTCTATTATCCAGATCAACAAGAAGATAGTGAAATCAAATATTCTCGAAGCCCTGAATATGGTGCTATAGATAATGCAACTAGTGTATTTGCTTACAACATGCCCTCTGTAGCTGCCGGCTTGAAGCTTCAGCCAGCCATGATGCCAGCTGTGCCTAGAAAAAGCCATGACCTTGTAAAGATACTACCAAAACCCAACAATGTACTTGTTAAGAACTTGAGTGGTGTCCAATACCTGCCTCCTGGTGTAAAGCCAATGCATGTGGTGCTCCCTACGACACCAACATTTGTTCAAAAGAATGTGCAAAACAATATGATAATGGCTGGGAACATACCTGCTTCCCAGATACTAGATAAAGCTGTTACTCCAACACTACCTTCAAATCAGTTCAACCCTATGTCGTCTGCAACCTTTACTCCTGGCACTACAGTAGTGACTCAAAACTCTCAAATTATTTATCGAGAAATGGTTCACAGTATTGACGGGAAACCATTTATATCGAGTGTGCCAGCTGTCCTAAGTGGCCATGACAATGTTACCAATGTTGCTCAGGCAAGCTCCTTGTACCAGAATGTGATGGTGGTTGATCAGTTTGGGAATACTTCTTGCATGTACACAGCCCCGCAACAACTCTTGCCCAAGGCTTGCAACTCTTCTATCTATAACAACAACATACCAGTATCAAATGCTCAAATAGATAAGAATGTGCCAAGTATGGCAAGTGATTTCAGCAAAACTCTTGTGATTGAAGTGGGACCTATAGTCCCTCCTGTGAGCACAAGTCAACCCTCCACCAGCCAGGCCTCAGCTCCCCTGCCACAGCCTGAAGGTTCGAAAGCTAAAAAACAAGACACAAACCTAGACCAGCATGAACCTAGAAACGACACTCCTGGATCTACAAAAGGGCTCAAAATACTTAGCAATATAAAGGTGGAAGTGCCTGTTCAACATCACAAGAACATGTTGAATAAAATCATGGACCTGACTGGTCCAAATGATTCAGACTGTCAGGAAAGATCCTTATCACCCGAGAGGATTCTACCTGATATAGAGATCAAGTCAAATGAAAGCTCCCAACCAAGCTCGAGTGCTGATAGTCATATTCAACACACATTCTCTGTTATAAAAAATGTAGGCAACCCACCTTCATACAAAGAAGCTACAAAGTCTTATGAAAAGATTGAGAATGAGTTTTCAGACAGTAACCCAGTGCCTGATTTGATTTGCAATGAGAAGCCGTCAATATCGCCATGCAGCGAACTGTCAGAACATGGCGACCATTTAGCAGAGAACTCTCCCATGTCCCCAAAATCAGAGCCAAGGAGCTCTTCACAAAGCAGCACACTTCAACGGCGGTCGCCTCCAGTCCCCGAACCTGTCAGCGAACCGAGAGTGCGCGCTCCGCCGAGGAACTACAGCAACCCTCTCATTCTAAACAACCTTTATGTGAAAAAGAACAAAAAGGTTCTGCAGATCAAAAATGCTAAGACTTCTGTATCCTCTTCAACAGCGTCTAGTTCCACTCAAATGGACCCTGCACCTTTGCCAGCCATTAGGGCTCCTGAAGACTTTTCTATTACGAAATTGCATAGTGAGAATAAAGAGAAGAGTACTCTTCATACAGTGTCCATTGAGAAGTTGAAGGAAGACGATGATCATCATGAATTTGATGCAGATAATGAGGAACAATCCATGGATATTGAGCCTGTTCCGCCTTCTAGTACTTTCTCGACTACAGTTGACATAGTTCAAGTTAAAGAGGAAATCAACACTAGCAGTGAGGGTGGTTTTAGTAACGAGACGAATTCCTCCGATCGCCAACTCACCCCTTTGGAGACCGCTTCGCTTCGCCCTATCAACGTGATTACGTACGGCAACATACCGCCGGGGGAATTTGACGACGAATCCAATCACAGGGAACTATTAGACTTAGAAGCAGCGTCGAAAAGCAAGCAGTTCGTCAACATGATGAATGAGAATTACTTCGGCGACTACGCGGATTATTTCACGCCCGATCGAGTAGAGTCCTTTGAGAGACCTGTCGCTCATCAGTCTAGTAAAGAGAACATGTACATTTGGGGCGAGCCGTCTCAGAAAGAGAATGAATTTGTGCTGCCGAATTTTATACATGAGAGCTACAAGATAGCTGAGAGTAATTATAACGACGGGATGGATGATACGGAAGGGTGTGAGAGGGATAGCAAGGCGGATGTTCTGAGCGAGGGAAGGAGTGAGAGTGAGCCAGCGCTCAACATTTGCGCGGATGAGAAGATGCCTCCGCGCGGGGAGCTTAGCGGGCAGGAGAGCAATGGTGACATGGAGTCTGCGTGGAATGGGATGTACCCGGAGGTTCCCCCCGCGACGGAGACGTACGACCTGCTGGCCCGCGAGAGCTGGGTGTCCGACGGCTCCGACGGAGACCCCACGGAGAAGAGGGAGACGCTTGAGGACGAGCTGCAGTTCCCGAAGCGCGTGCACACGTGTGGTGTATGCGGCGCCAAATGCTCGTCGCTGAAGGAGCTGCGCACGCACCGAGCGCTGGCGCACGACTGCGCGACCAGCTCCAAGACCAGCTACAGCCGGCTGCTCACCGCGCGCAGCATCAAGAAGGAGGAGAAGACTGACGACGCGAACACTGATATAACGCCTGCGACCCTGTTGTTGGACAATAAGGAGTCTCTGGGCATGGGGGGCGCTATGGGGGGCGCCATGGGGGGCGGCATGCTGGGCGCGTACGACGCCCTGGCGGAGACCAAGCCGCAGCTCGAGACCATCATCAAGCAGGAGACCAAAAGGCGGCGCAAGGACTATGTGTGCCACACCTGCAAGGTGGACCAGGGCTCGGAGGCGGCGCTGACGCTGCACCGGCAGGTCCACCCGCTGGAGTGCCTCACGTGCGGGAAGAACTTCCGCCGGCGCGCCAACCTCGCGCTACACGTCAAGACGCACTTCGGCATCCGCAACTACAAATGCGAGGTGTGCGAGAAGCGGTTCATAACGCGGCAGAAGCTTCTGGAGCATCACAACACGCACACGGGCCGCGCGCCCATCAAGTGCACCCACTGCGACCTCTGCTTCCGGAGATACTCCAACATGgtgcagcacagAGACCGCCACCACTTCCACAAGAAGACTAAGGTGCGCGACTTCGTGTGCCAGTGCGGGGCGGTGTTCCACTCGCGCGCCAAGCTGCTGTGGCACAAGGAGACGCACGACGGCCGCCCCAAGGCCTGCCTCTACTGCAGCGAGAAGTTCGTGCACGCGGCTTCGCTCACCCGCCACGTGCGCAGGAGCCACAACGAGTACTACCTGCCGAGCGCCGCGCACAGCGGGCAAACCACAAGGGCTGAGAACGTTGCTTGTCCCGTCTGCAAACAGGTATATCTCCGCGCCAACCTCCGCGCTCACCTGGCCACGCACAGCGGGTCGCGGCCGCACGTGTGCGTGATCTGCAACAAGGCCTTCACCACCAAGTGGAACCTCAAGCTGCACCGCTGGACGCACCTCGGCCGCTCCGCCAAACCTTACAAATGCACTCTGTGTAAAGGCGCCTTCATCCGCCACACCGAATACGTCTCCCACATGAATTCCCACAAGTCTGTCCGCCCTTATACGTGCAACTACTGCGGCTGCCAGTTCATCCGCAAGTACAACTGCCAGCGCCACGTTAGGGAGCACGAAATGGCTAAGAAGTATGTGTGCAAAGTGGCCGAGTGCGGTAAGTCGTTCCATAGGAGTTACTACTTGTCTGAGCATATGAAGGTGCATAGCGGCGCGCGGCCGTTCTCTTGTTCCATTTGTGGTAAAACTTCCAGCAATAAGTCCAACCACAACAAGCATTTGAAAATACACCACGCGCGCGAGCCTATCGCCACTGAGGCGTAA
- Protein Sequence
- MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVITALCNLSKNANYSSRTPTPLHSERSYRSRSRTPATEDSALKWSGSRGGDHERYWRRTPSRTPRPSTSSRVNTPASAEVNFDNRSLNNNSGSYSNSPYPMKMDKTAQTQAYIHNPPLSEFDTQYVYYPDQQEDSEIKYSRSPEYGAIDNATSVFAYNMPSVAAGLKLQPAMMPAVPRKSHDLVKILPKPNNVLVKNLSGVQYLPPGVKPMHVVLPTTPTFVQKNVQNNMIMAGNIPASQILDKAVTPTLPSNQFNPMSSATFTPGTTVVTQNSQIIYREMVHSIDGKPFISSVPAVLSGHDNVTNVAQASSLYQNVMVVDQFGNTSCMYTAPQQLLPKACNSSIYNNNIPVSNAQIDKNVPSMASDFSKTLVIEVGPIVPPVSTSQPSTSQASAPLPQPEGSKAKKQDTNLDQHEPRNDTPGSTKGLKILSNIKVEVPVQHHKNMLNKIMDLTGPNDSDCQERSLSPERILPDIEIKSNESSQPSSSADSHIQHTFSVIKNVGNPPSYKEATKSYEKIENEFSDSNPVPDLICNEKPSISPCSELSEHGDHLAENSPMSPKSEPRSSSQSSTLQRRSPPVPEPVSEPRVRAPPRNYSNPLILNNLYVKKNKKVLQIKNAKTSVSSSTASSSTQMDPAPLPAIRAPEDFSITKLHSENKEKSTLHTVSIEKLKEDDDHHEFDADNEEQSMDIEPVPPSSTFSTTVDIVQVKEEINTSSEGGFSNETNSSDRQLTPLETASLRPINVITYGNIPPGEFDDESNHRELLDLEAASKSKQFVNMMNENYFGDYADYFTPDRVESFERPVAHQSSKENMYIWGEPSQKENEFVLPNFIHESYKIAESNYNDGMDDTEGCERDSKADVLSEGRSESEPALNICADEKMPPRGELSGQESNGDMESAWNGMYPEVPPATETYDLLARESWVSDGSDGDPTEKRETLEDELQFPKRVHTCGVCGAKCSSLKELRTHRALAHDCATSSKTSYSRLLTARSIKKEEKTDDANTDITPATLLLDNKESLGMGGAMGGAMGGGMLGAYDALAETKPQLETIIKQETKRRRKDYVCHTCKVDQGSEAALTLHRQVHPLECLTCGKNFRRRANLALHVKTHFGIRNYKCEVCEKRFITRQKLLEHHNTHTGRAPIKCTHCDLCFRRYSNMVQHRDRHHFHKKTKVRDFVCQCGAVFHSRAKLLWHKETHDGRPKACLYCSEKFVHAASLTRHVRRSHNEYYLPSAAHSGQTTRAENVACPVCKQVYLRANLRAHLATHSGSRPHVCVICNKAFTTKWNLKLHRWTHLGRSAKPYKCTLCKGAFIRHTEYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVAECGKSFHRSYYLSEHMKVHSGARPFSCSICGKTSSNKSNHNKHLKIHHAREPIATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00275622;
- 90% Identity
- -
- 80% Identity
- -