Cfug016033.2
Basic Information
- Insect
- Carpatolechia fugitivella
- Gene Symbol
- -
- Assembly
- GCA_951230895.1
- Location
- OX579656.1:2865527-2878578[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.8 1.7e+02 4.0 0.3 2 23 6 27 5 27 0.96 2 13 0.019 1.7 10.2 0.7 1 23 1000 1023 1000 1023 0.93 3 13 4.7e-06 0.00043 21.6 0.5 2 23 1128 1149 1127 1149 0.97 4 13 0.0003 0.027 15.9 2.1 1 23 1155 1177 1155 1177 0.98 5 13 0.0032 0.29 12.7 5.6 2 23 1184 1205 1183 1206 0.94 6 13 1.9 1.7e+02 3.9 2.0 5 23 1219 1237 1217 1237 0.97 7 13 0.0006 0.054 14.9 1.6 2 23 1243 1265 1242 1265 0.96 8 13 0.0057 0.52 11.9 0.2 3 23 1325 1344 1323 1344 0.97 9 13 0.0045 0.41 12.2 0.6 3 20 1352 1369 1350 1372 0.85 10 13 0.00074 0.066 14.7 0.8 1 23 1380 1402 1380 1402 0.99 11 13 0.0068 0.61 11.6 7.2 1 23 1408 1430 1408 1430 0.98 12 13 7.9e-06 0.00071 20.9 1.3 1 23 1436 1460 1436 1460 0.98 13 13 0.0011 0.1 14.1 5.5 1 23 1466 1488 1466 1489 0.96
Sequence Information
- Coding Sequence
- ATGGACCAGCTAGTACAGTGCCCTGTGTGCACTCTCTTCCTGCACAATGGAATGTCCCTGGAGTCCCATTTGGATACTCATCCTAAAGATCAGGTCATCAAGGCTTTGTGTAGTTTATCATCTAAAAGCTCTAACTATAGTAGCAGTAGAACCCCTACTCCTCTGCATTCTGAAAGATCTTATAGAAGTAGATCTCGGACTCCGGCTAACGAAGACAACGGATTAAAGTGGAGTGGTTCTCGGGGTAGTGAACATGACCGCTACTGGAGAAGGACTCCTAGCCGAACTCCTCGACCATCAAATCCATCAAGGGTCAACACTCCAGCATCAGCAGAGTTGAACTTTGACAATGGATCGTTGAATAATAATTCTGGGTCTGGGTACTCTAGTTCTCCCTATCCAATGAAAATTGACAAAACTCAACAAACTCAAACTTACCTCCAGAATCCTCCTTTGTCAGATTTTGATCCACAGTATGTGTATTATCAAGACCAACAAGACGATAGTGAAATCAAGTACTCTCGAAGCCCTGAATATGGTGCTATCGACAATGCTAGTAGTGTATTTGCTTACAGCATGCCTCCAGTCAGCGCTGGTATGAAACTCCAGCCAGCAATGCTGCCAGCTGTCCCTAGAAAGAGCCATGACATTGTAAAGATGCTACCAAAACAGAATAACTTACTAGTGAAGAACTTGGGTGGTGTTCAATACATTACACCTGGAGTTAAGCCGATGCATGTTGTGCTTCCTTCAACACCAACTTATGTTCAGAAGAATGTACAAAATAATGTGATAATGGCTGGGAACATTCCTACCTCCCAGATGCTGGACAAAGCTGTTACCCCAACACTGCCTTCAAATCAATTCAACCCAATGTCTTGTGCAACCTTCACTCCTGGCACGACAGTAGTGACTCAAAACTCACAAATAATTTATCGGGAAATGGTCCATAGTATTGATGGGAAGCCATTCATATCAAGTGTGCCGACTGTCCTCAGTGGCCATGACAATGTTACCAATGTAGCTCAGACTAGTTCAATGTACCAAAATGTAATGGTTGTTGATCAGTTCGGGAATACGTCTTGTATGTATAATGCACCTCAACAGCTTATACCCAAGGCATGCAACTCTtctatctataataataatatgccagTAACTAATGCTCAAATGGATAAGAATGTGCCGACCATGACAAATGAATTCAGCAAGACCCTTGTGATTGAAGTGGGACCTATACTTTCTCCCGTAAGCACAAGTGAAACAGCTGCCAGCCAGGCTTCTGTTCCAGCACAGCCTGAAGGATCAAGAGTTAataaacaagaaacaaaatCCCAATCAAAATCACAACAGGAAGACCAATGTGAACCTAGGAATGACACTCCGGGGTCAACAAAAGGGCTCAAAATACTTAGCAATATTAAGGTTGAAGTGCCTGTTCAACATCACAAAAACATGCTGAATAAAATAATGGATCTAACCGGTCCTAATGATTCTGACTATCAGGAAAGATCCCTATCACCAGAACGGATTCTACCTGATTTAGATTCTAACAATCAAAGCATATCAAATGGAAGCTCCCAATCGTCCCAACCCTGTTCAAATGTCGACAGTCATGTGTCACACACATTTTCTGTGATAAAAAATGTAGGCAACCCACCTTCTTACAAAGAGGCTACTAAGTCTTATGAAAAGATTGAAAATGAGTTTTCATCAGACAGTTGCCCAGTGCCAGATCTGATCTGTAATGAGAAGCCGTCGATATCGCCGTGCAGCGAACTGTCTGAACATGGCGACCATTTAGCAGAGAATCCTCCTGTATCTCCTAAGCCAGAGCCAATGAGCTCTATGCAAAGCAGTATACTGCAAAGGCGAACACCACCAAACATAGAAGCTGTTATTGAACCAAGAGTGCGCCCTCCACAGAGGAATTACAACAATCCTCTGATACTAAACAACCTTTATTTGaagaaacacaagaaagtgttaCAGATTAAAAATGCTAAGACTTATTCAATTACGTCAGCTACATCCAGTTCCACTCAGATGGAAGTTGTGCCTTCGTCAACCATTTCTAGAGCTCCTGAAGATTTTTCCATATACAAGTTGCATAGTGAGAATAAAGAGAAGAGTATTTTACATACAGTGTCCATTGAGAAGTTAAAAGAAGACGATGATCAGCATGAATTTGATGCAGACACTGAAGAACAATCAATGGACATTGAGCCTATTCCTCCTTCCAGTAGTTTCGCAACTACAGTTGACATTGTTCAAGTCAAGGAGGAGATTAACACAAGCAATGAAGGTGGCTTTAGTAACGAAGCTAATTCTTCTGATCGTCAACTCACTCCTTTGGAAGCTCCTTCCTTACGCCCTATTAACGTGATCACTTACGGCAATATGCCTCCTGGCGAGTTTGATGACGAGTCCAATCATAGAGAATTATTAGACCTGGAAGCAGCATCGAAAAACAAGCAGTTCGTCAACATGATGAATGAGAATTACTTCGGTGATTACGCGGATTACTTCACGCCTGATAGAGTGGAATCTTTTGATGAGAGGCCTGTGCCTCATCAGTCGAAAGAAAACATGTACATTTGGGGTGAGCCGTCGCAGAAAGAGAACGAATTTGTATTGCCGAATTTTATTCATGAGAGTTACAAGATAGCTGAGAGTAATTACAACGATGGTATGGATGACGCGGAGGGTTGCGAGAGGGATAGCAAGGCGGATGTGTTGAGTGAGGGTCGGAGTGAAGGCGAGGCGCCGCTGAACATCTGCGCTGATGAGAAGATGCCGCCGCGTGGGGAGCTCAGTGGGCAGGAGAGCAATGGCGACATGGAGTCGTCTTGGAATGGGATGTACCCCGATGCGCCGCCTGCAGAGCCCTACGACCTAATGGCTCGCGAGAGCTGGGTGTCTGACGGGTCGGACGTTGACCCCACCGAGAAGAGGGAGACGCTCGAGGAAGAGCTCCAATATACGAAGTCCCGTATGCACACTTGTTCGCAATGTGGGGCCAAGTTCGCCTTGCTAAAGGAGCTCCGGTCGCACCGGGCCCTCCTACACGACTCGCCCTCCAGCTCCAAGACTTCGTACAGCAGGATGGTCACCGCCCGTACCATCAAGAAAGAGGAGAAGACTGACGAAGTGATACCAGGAATGCCGCCAATCAACACGCTACTGGATACTAAGGATTCCGTGGGCATGCAAGCCAACATGCTGAGCGTGTACGACGCAGTGGCCGAGGTCAAACCTCACATCGACGCCATCATCAAGCAGGAAACTAAGCGACGACGCAAGGACTACATCTGTCACACTTGCAAGGTGGACCAAGGTTCGGAGGAAGCTCTGATGCTGCACCGGGAGATCCACCCTTTAGAGTGCTTGACTTGCGGCAAGAACTTCCGCCGCCGCGCCAACCTCGCGCTACACATCAAAACGCACTTTGGGATAAGAAACTACAAATGCGATGTGTGCGAGAAACGTTTCATTACGCGCCAGAAGCTCGTCGAACATCACAACATTCACACCGGGCGCGCTCCCATCAAGTGCACGATGTGCGACCATACCTTCCGCCGGTACTCCAACATGGTGCAACACAGGGACCGCCACCACTTCCACAAAAAGACTAAAGTGCGCGATTTCGTCTGTCATTGCGGCGCCATCTTCCACTCGCGCGCCAAACTGCTGTGGCACAAGGAGACGCACGAAGAGAAGCCGAAGTCTTGCGTCTACTGCAGCGAGAAGTTTGTGCATGCCGCCTCGCTCACGCGCCACGTGCGCCGCTCGCACAACGAGTACTACGTGCCCGCGCAGGCCCGGCGCGGCAGGGAGAACACCGCCTGCCCCGTGTGCAAGCAGTATACTGCAGTAAGAAGTTTGTTCATGCCGCCTCGCCCACTCGCCGCGTGCGCCGCACGACAGTGCTGCGTGCCCGCGCAGGGCCGGCGCGGCGAGGAGAACACCGCCTGCCCCGTGTGCAAGCAGGTGTACCTCCGCTCGAACCTGCGCGCGCACCTCCTAACTCACAGCGGCAAGCGCCCCTACCTCTGCATTATCTGCAACAAAGCCTTCACCACCAAATGGAACCTCAAACTCCACCGCTGGACGCACATGAGCCGCTCCGCCAAACCCTTCAAATGCTCCCTCTGCAAGGGCGCCTTCATTCGCCAAACGGAATACATCTCACACATGAATTCCCACAAATCCGTACGCCCTTACACTTGCAACTACTGCGGCTGCCAGTTCATAAGGAAATACAACTGCCAACGACACGTAAGAGAACACGAAATGGCGAAGAAGTATGTCTGTAAAGTGCCCGAGTGCGGTAAGTCTTTTCATAGGAGTTATTATTTGTCGGAGCATATGAAGGTGCATAGCGGTGCGAGGCCGTTTTCTTGTTCGATCTGTGGGAAGACATCGAGTAACAAGTCCAACCATAATAAGCATTTGAAGATTCATCACGCGCGCGAGCCGGTCGCGACCGAAGCGTAA
- Protein Sequence
- MDQLVQCPVCTLFLHNGMSLESHLDTHPKDQVIKALCSLSSKSSNYSSSRTPTPLHSERSYRSRSRTPANEDNGLKWSGSRGSEHDRYWRRTPSRTPRPSNPSRVNTPASAELNFDNGSLNNNSGSGYSSSPYPMKIDKTQQTQTYLQNPPLSDFDPQYVYYQDQQDDSEIKYSRSPEYGAIDNASSVFAYSMPPVSAGMKLQPAMLPAVPRKSHDIVKMLPKQNNLLVKNLGGVQYITPGVKPMHVVLPSTPTYVQKNVQNNVIMAGNIPTSQMLDKAVTPTLPSNQFNPMSCATFTPGTTVVTQNSQIIYREMVHSIDGKPFISSVPTVLSGHDNVTNVAQTSSMYQNVMVVDQFGNTSCMYNAPQQLIPKACNSSIYNNNMPVTNAQMDKNVPTMTNEFSKTLVIEVGPILSPVSTSETAASQASVPAQPEGSRVNKQETKSQSKSQQEDQCEPRNDTPGSTKGLKILSNIKVEVPVQHHKNMLNKIMDLTGPNDSDYQERSLSPERILPDLDSNNQSISNGSSQSSQPCSNVDSHVSHTFSVIKNVGNPPSYKEATKSYEKIENEFSSDSCPVPDLICNEKPSISPCSELSEHGDHLAENPPVSPKPEPMSSMQSSILQRRTPPNIEAVIEPRVRPPQRNYNNPLILNNLYLKKHKKVLQIKNAKTYSITSATSSSTQMEVVPSSTISRAPEDFSIYKLHSENKEKSILHTVSIEKLKEDDDQHEFDADTEEQSMDIEPIPPSSSFATTVDIVQVKEEINTSNEGGFSNEANSSDRQLTPLEAPSLRPINVITYGNMPPGEFDDESNHRELLDLEAASKNKQFVNMMNENYFGDYADYFTPDRVESFDERPVPHQSKENMYIWGEPSQKENEFVLPNFIHESYKIAESNYNDGMDDAEGCERDSKADVLSEGRSEGEAPLNICADEKMPPRGELSGQESNGDMESSWNGMYPDAPPAEPYDLMARESWVSDGSDVDPTEKRETLEEELQYTKSRMHTCSQCGAKFALLKELRSHRALLHDSPSSSKTSYSRMVTARTIKKEEKTDEVIPGMPPINTLLDTKDSVGMQANMLSVYDAVAEVKPHIDAIIKQETKRRRKDYICHTCKVDQGSEEALMLHREIHPLECLTCGKNFRRRANLALHIKTHFGIRNYKCDVCEKRFITRQKLVEHHNIHTGRAPIKCTMCDHTFRRYSNMVQHRDRHHFHKKTKVRDFVCHCGAIFHSRAKLLWHKETHEEKPKSCVYCSEKFVHAASLTRHVRRSHNEYYVPAQARRGRENTACPVCKQYTAVRSLFMPPRPLAACAARQCCVPAQGRRGEENTACPVCKQVYLRSNLRAHLLTHSGKRPYLCIICNKAFTTKWNLKLHRWTHMSRSAKPFKCSLCKGAFIRQTEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHEMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCSICGKTSSNKSNHNKHLKIHHAREPVATEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01403726;
- 90% Identity
- -
- 80% Identity
- -