Basic Information

Gene Symbol
Hr39
Assembly
GCA_948473455.1
Location
OX419585.1:3633957-3650107[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.13 1.8e+03 -1.4 7.1 65 163 206 312 163 364 0.65
2 4 2.5e-07 0.0033 17.5 0.1 1 20 446 465 446 473 0.91
3 4 0.015 2e+02 1.7 0.0 78 122 491 534 468 539 0.66
4 4 2e-61 2.6e-57 195.7 0.0 202 379 558 730 496 732 0.92

Sequence Information

Coding Sequence
ATGAGTGCGATGACGAGCGAGGGGGAGGCTGTCAAAGTGGAGGGGGGGCACGTGTCAGTCACAACCATCAGCATGTCCGGTCCGGAGACCAGCAATGGCCAGTTCTCGTACAGTTCGAGCGGGGTTCGCATCAGCGTGTCATCAGAACCCCACGATGAAGACTCCACTGATGCTGAGATCTCTAAGATCGACTTCTCACAACATCAATATGAGGTGAACATGAGAAATAAGAAGAAGCGTTCGGCGAGCGGCGCGGCGTGCGAGCCGACCCCTATCGAGCGCGAGCGACCCATGTCTTGGGAGGGCGAGCTCTCCGACTCCGAAATGGTCATCGACACCAGCGTTAACAATGACGAAAACAGCAACTCATTAGACCTGCAATCATCACGCGATTCTATCGACACACTGCGGAACGTGACTATCAAGACTGAGCAAGTTAAGAACGAGCCATTCCAGAGCTTGGACGACCAGAGAGTGCTGGATCTGAAGTACACCGCACCCCTGCAGCCGCATCAGAGGAGCCTCAGCATGAACAGGATATCGGTTCTAACTGACAACGCATCGCTATCCCTCTCCCGGCGGCCGTCTTCTCCGACCAGCAGCGCCAAATCCCTTATCCTGGACCAGAACAACATGCCGATGATGACGCAGTCGGGTCTAGGAGAGGTCCAGAACCTGACCATCAAGAAGGAGAACCAGTTGTCAGAACTGAAATGCGAGCCATCTTCAGCAGGCATGGACAAGTTGCTGGGAGCTTTACACAGTTCGCCATTGTTAGGGAGACTGCCACGCGTCCAATCCAGCGCCAGTACTGATTCCGCCGTTCATTCCATGTATACGCATAGCGTATACAGCAGTCCATCGGCGAGTCCCAGGGCGTCGAGGCATTATACTCCATCTCTTTCCCGCAACAACAGCGACGCGTCTCACTCGTCGTGCTATTCCTACAGCTCAGAGTTCTCGCCTACTCATTCTCCAGTGCAGGGCCGGCACCCGCACTTGGTATACCGCGAGGCGACGGCTAACGCGATATTCCCCGCGTCCCCCGCGCACGATGACGACGCGGAGGGGGAAGACAGGCTGCATCACCACCAGGGCATCAGCAGACAACAGCTCATCAACAGCCCTTGTCCAATATGCGGCGACAAGATCTCAGGCTTCCACTACGGGATATTCTCGTGCGAGTCCTGTAAGGGGTTCTTCAAGCGCACGGTGCAGAACAGGAAGAACTACATGTGCCTTCGGGGGGGGAACTGCCCCGTCACTGTTGCGACCAGGAAGAAATGCCCCGCGTGCCGGTTCGACAAGTGTCTGGGGTGTGGGATGAAGCTGGAAGCGATCAGGGAAGACCGCACTCGCGGCGGACGCTCCACATACCACTGTTCGTACTCGCTCTCCGGCGCCGCGTCTACCGGCTCACTCTTGCAGCCGCACGCGCCGCCACTGAGACACGCCTCCAGCCTCACTTGTGTGAATGGACCAGGGTCGTATAACAGCAGAGGAGAGTCCAGTAACAGCCGACTCACGCCCGACATACCGCCGTTATTGCAGGAAATAATGGACGTGGAACACCTATGGCAATACAACGAGTCGGAGCTGGTGCGGCTGGGCAGGGGGGCGGGCGGGGGGAGCCCCTCTGCCAACCCCCTGCTGGCCGCCACCGGCATCACCGCGCAGAACTCCAGCCCAGACTTCCTCGCAGACCTGTGCAACATCGCCGACCACAGGCTCTACAAGATCGTCAAGTGGTGCAAAAGCTTGCCGCTCTTTAAGAATATTTCGATCGACGACCAGATCTGCCTGCTGATCAACAGCTGGTGCGAGCTGCTGGTGCTGTCGTGCTGCTACCGAGGAGTCAGCACGCCCGGGGAGGTGCGCGTGGGCAGCGGCCGCGGCATCACACTGCACCAGAGCGCCAAATTGGGCCTGACGCCATGCATAGAGAGGATGCTGAGCTTCACAGACCACTTGAGGAGGCTGCGGGTCGACCGGTACGAATACGTCGCACTCAAGGTCATCGTTCTACTCACATCTGACGCGCCGGAGCTGCGCGAGGCGGAGAAGGTGCGCGCGTCGCAGGAGAAGGCGCTGGCGGCGCTGCAGGCGTACACCGGGGCGCACTCCCCAGACACGCCCGCCAAGTTCGGCGAGCTGCTGCTGCGCATACCCGAGCTGCAGCGGACTTGCCAGGTGAGGGGGGGGGACTAA
Protein Sequence
MSAMTSEGEAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSEPHDEDSTDAEISKIDFSQHQYEVNMRNKKKRSASGAACEPTPIERERPMSWEGELSDSEMVIDTSVNNDENSNSLDLQSSRDSIDTLRNVTIKTEQVKNEPFQSLDDQRVLDLKYTAPLQPHQRSLSMNRISVLTDNASLSLSRRPSSPTSSAKSLILDQNNMPMMTQSGLGEVQNLTIKKENQLSELKCEPSSAGMDKLLGALHSSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHLVYREATANAIFPASPAHDDDAEGEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYHCSYSLSGAASTGSLLQPHAPPLRHASSLTCVNGPGSYNSRGESSNSRLTPDIPPLLQEIMDVEHLWQYNESELVRLGRGAGGGSPSANPLLAATGITAQNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGSGRGITLHQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTGAHSPDTPAKFGELLLRIPELQRTCQVRGGD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00033911;
90% Identity
iTF_00806824;
80% Identity
iTF_01403553;