Basic Information

Gene Symbol
egg
Assembly
GCA_948473455.1
Location
OX419609.1:2596546-2632974[+]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9 8.2e+03 -2.9 0.0 28 38 1803 1818 1783 1819 0.64
2 2 8.9e-11 3.9e-07 30.1 0.0 4 74 1850 1941 1847 1944 0.92

Sequence Information

Coding Sequence
ATGAGTTCTGGCGACGGAAATAAAGTCTCCTGCTCGATTACTGAAGGTAACTCTGAACTGGACCCCGAAAAACCGAATTTAGAATCAAAAGAAGATCCGCCTTCTAAGTTGCCCTTAGACGGCAGTGGAGATCATTTACCACTTTCTAACACCATAGTTATACCTCCTATTGATCAACTACAAATCAGCACCAAAATCTTACCAGAAGAAGTTACAGCATCATCAAATAGTTGCATGGTAGTTGAAAATGAGAACAGCGGTAAAGATATAGTTGAATTCAATAAACTCGAAAGTGATCCTGTAGGCAAATCTACTTCCGAATCTAAAGATATAACTGAGCCTCCTGTAGCTACAATTATCACACCCGAACAAACTACCAGTACTGAAGAAATCCATATACCTTCAACTAAACCTACATTTTTAGAAAACATCACTTCATTAGCTTCGGAGGAAGTTGACAGTGAAAACCAGGATGAAGAACTAATCCTCAAATGGGATGATGATGATGAAGAAGACAACCTTTTAGGTAAAGATGATGAAATTGACAAAGATACAGATAATGTTAAAATTTGTCCTGATCCAGGTGAAAATTTAATCAATACAAATACAGGAACAGATGATGATTTAAATGAAATAGCAAATATTTCAGATGAAGTAGTTAGTACTGCTGATGAAATAAATAAAATAACTAGTGAAACAGTTGAAGTAACTAAGATTGCTGATGAAGTCAATACAGCTGATAAAACAAATGAAGAAAATGCCTTTACTGCTGATGCGACAGACAATATTACTGATGCAACAGCTAGGGGACAAGGCTGTCTTGCAGATATCATCGGTAGTGCTGCTGAGAAAGTAATCAGTGCTGATAATGTAACAGATGAAGTTCCTAATCCTACAGGCAATGTTGCTAATAAAACAAACATTGTGATTGATGAAACAGATGCTACTAATGTGACAAACAATACTGCTGTGCAAAGTGATAATGTTATTGATGAATCAGTCTCTTCTGTTCATCAGGCAGATAATGTCGTAGATGTAGCAGTCAATATTGCTGATGATGTAGCTAAAAATACTAATGAAATAGCCCATTTTGTTCAAGAAAAAGTCTGTTCTGTTAGTGAGACAAACAATGTTGGTAATACTGCCAATTCTGATGAATCTAAGAATATTGCTGAAGAATCCATGGCTGTTGATGACCTACCTTCTAAAGATGTTGAATCTATAACAGAAATAAAGTCATCTGAAGATGATGTGCCAGAAGATGAACAAGAAGATTTGCTGTCAGAAATTGATGCACAAATAGCCCAGTTAGGTGCAAGCATTTCTAAAGCAGAAAATGAGGAATTTAAGAATATTGAGAAAATAAAAGAAATATCAGTGACTTGTTCAGAAATCATAAAGCCTGAAGCATCTATATCACAAGAAGTAATTGAAATAGACATGACAGAAGAAACTACTGAACAAATATCAAACCAAACAAATGTACTTAGCCTCGAACTTGCTTCTGAACACAAAAAAGAAAATCCTGTTGTAATTGATGAGATATTACAAAACATTCCTGAAAGTGATAATAAACAGACTAAAGTAGAAATAGAAGGCTGCATTTCTCATAAAAGTACTGATGAAGTTAATCCAGATAGAATAGAGCAAAATAAAACTACAACCACTGCTGCTACTGATACAATAGTAACCCCTATGGAAATAGAAACTGGTACATGCCAAACCAAAGACAACACTATAGAAATTCCTGAAGAAGAAATAGAAAAAGCTCCTGCTTATTTAAAAGCCACTGGATTGGAATTTGACCATAATCTTGATGAAGCTTTACCGAAAGATACAGAAATGCAAGCAAATAGTACAAGAATAGACTGTGATGATATTGAAATGACTGAAACATTTAGTAAAGATGCTTCTTTTGCACATGATTCTTCAAATTCCATTGAAGATAATCAACATGGTGTCAACAAGCCAAATGTAATGTTAGAAATTCCTACACAAGAACTTATAGATTTAGATGAATCTATGATTTCGACCCAAGATACCAAAAGTCATTTAGATGAAACTGGTAGTATTTGTGTAGATTTAACAGATGGAAATCTTGAATCAATGAGTCCAAATAAGGAAAGTATCTTAGAAAATAAGACTGTTGGAACAGAGGGATTGGATAACAATGTTTTGGTACAACAAGACTCAGAACTAAGTAATAAACATATTCCAGATGAAGCTAATCTTAAAAATGACACAGTGACAAAGCCTGACTGTCCTGCACAAGATACGGATAAAAATAAAGTTATTACAGAAAAAAATATTGCTACAGATGTAGTTGCAAACCCTGATCAAAACGAGTCAAAGGATCCTGCCAAATTAGATGATAACAGTGGCAGTAAAACACCACTAGAACCTTCTGCTTCTCTAGAAGTTAATACCACAAAAGTTGATGTTCTCAAAGCTGCAGATGATATATCTACAACAACTTCAATTGTAGATGAAATAATCCCAATTGCTGACCAAATTCAACCCACTGAAGCTTCAACATCAATGGATGTTCAACCCGCAACACAGATGGAATTGCAACCAAATATAGATGCGTTTGACGATGCAGCAGAAGTAACGGACAGTCTAGGTCTGTTAGCCGAGTCATCCCGAGTAAGGGAGGAAGACGATGCAGATGTTGACGCAGATGCTGATGATCAGGAGACATCCGAACATGATGATGATGATGAAGACTATGATCCTGACGATGAAAGCAGCAATCAACAGACAGCAGAACATTCCGAAGAAGATTCTGCTCAGCAATTAGAAACAGATGTGGTCAAAACACATCCTGAGACAGAAACAGAAGTTGGTGACTCAACGACTAAGACTGACATTGCTTTTGAACTATTAAAACAAATGGATCAAGATACGGTGCCGGCAGAAAGTGTAGATAAAGTTATAAGTGAGACAGCAGATAAAGACGCTGAATTTGAAATAAGTAATGTTGTCACTGAAGATACAAAGGAAGCTGAAGGGGAACTGGATATTGACGATGAAATTGTGTGTGAAGAGCCTATCTTCGCTTTCAAGGTGGAAATACCATCAGATAATATAGAAGTTGAAGAAAATGAACCGGACGTAGACATGGGTGCCCTAAAAGAACCAGCTGATGATACTACCAAAGAACAACCGAAAGAAGTACCTAAAGAAATTCCCGTTAAAGTGTACGCGGCGAAAAAACGAGACCCTTCAGAGCCAAAAGCAAAGACAGATGATGTTACTAAATCACCATCGAAGAAGAAGTTGGAAATAGCCAAGCCGAAACATGTTGTTAATATTGTTGACTTGGAGAGTTCCTCGGAAGATGAGGCCGCCCCAAAACCAACATCGGCGGTAACCACCGAGGTGACGTCAGTGAGCATCTCAGCGGCGATAGACGTGGTGTGTTCGTTTGACAACGGCAACACTTGCAGCATATCCAGCGACCAGGGGGAGACCATTATAACGCTGCCCAAGCGAGCCAgcgctacgcacacgcctACATCCCGGCTTAACACCAGTGAAATTACCATCAAAACCGCGACACAGACAGAGCCAACCCTCTTCATCCCTGAGACTACGATGGGAGCTTCGAAGGATACGCCAGCATCAAAATTTGGAGGTTTGGAGGTGTTCACCGTGGACTCGGATGATGAGGAAACTGCTGCGCCCCCCCCTCCCGCGTCCCCCCTGCCCTCGCCCCCGCGCTCGTCCAAGTGCGCGACGCCGGGCTGCGCCGTAGCGCCGTCCTGCTCGCACTATGACGTCAGGAGGAAACGACGCGCCGCGCTCTGCGAACAATGCGTGGGGCTACACTACACCAGGGCTGCGAACCTGGTGGAGGGCATCAAGAGTGGAGTATCCTTACTCGACTTGGAGGAGCCTCCTCGAAGCCAGGAGCTGGTGGAGATATCTGATTCCGATGACGATGATGATCCTGGCAGCAAGCATAAGGAAACTATTGACGAGCAGACCGCCGGTATGTTGGAGCGCGATCTAGCGGACATGATAAACGCAACGTGGGAGAAATTCAAGATGGACGCCAAACTGAAGCAGGCGCAGGATGAGTTGACTTTGGATCTGGAGCGACTCGAGAAGGAGAGCGCAGAAGTGTGTGCGATGCTGGACTCGTGCCAAGTGGCGACGGACAAGCTGCGCGGCGAGCTGTACGCCACGTTCGCAGTTAGGAGGCACAGCCTGCCGCCCTACACCATCTTTGACACGCCGGACCGATACTTCATGTGTCCAGAAGTGGCGCCCGTTATGAAGGTGACTGAAGAGAAGTCGAAGAAACGGCGACTTTCTTCTGCAAGCGAAAGTCAGGCGAAGAAATCGGCAACGACGGGGACACTAGCGGACCACAGAGAAGACGATAACAAACAGGATCCTAAACCTGAGTCGACGCCGGCAGCGGTGGATAATTCCAAAATGGACGACGATAAGGACATATCGGTGGTGACGCTGTCTGCGGAGGCCGCGCCGGCGGACCTGCCCCCGCCCGGGGACGTGCCCCGCCCCCCGCTGCGCGCCGGCGACACCGTGTACGCCATGCGCAGCGCCTTCGGCTCCTGGATCCGCGCGCAAGTGCTCGAGGTCACGCCCAAGGGAACCACCCCGACCACACAGAATTTCAGTTATTGCCGCATCAAATACGAGAACAAGACTTCACGAAACGCGTACAAGATTCTGCCGGCGCGCTGCCTAGCTTATTCTGAGCCCTCTAGCGTTCGAATGACTATAGGCACGCGCGTGGTAGCCGTGTTCAAGGACAATTCCCCCGACAACAAGAACTCCAAACGGGACTCCCTCTCCTCCGGAATAGTTGCCGAAGTGCCCAATCCAGTTAACAAGTATCGCTACCTGGTGTTCTTCGACGACGGCTACGCCCAGTACGTGCAGCACAAAGACACTCGGCTGGTGTGCGAGTGTTCCGCGCTGGTGTGGGAGGAGGTGCACGCCTTCTCGCGCGAGTTCGTGAGACAGTACCTGCTGGACTACCCCGAGCGGCCCATGGTGCGGCTGCATACTGGCCAGAACCTCAAGACCGAGTGGAACGGAAAATGGTGGCTATCTCGCGTGCTAGAAGTGGACGCGTCTCTAGTGCACGTGTACTTCGAGCAGGACAAGCGCACGGAGTGGATCTACCGGGGCTCCACGAGGCTGGCGCCGCTGTACCTAGAGCTGCAGGCCGCAGAGAAACACAGGAACAGGCTGCCCAGGAACAGGCAGAGCAGGTTGAACATGCCGTACGTGGAATACACTCGTCTGGACGAACAAGAGAACGCGACCCCGGCAGAGGCGCAGATAAAGGCGCAACAAGAGGAGATCCGTCGGCAGAGAGCGGTGGCGAAGAAATCAACAACTCCGAACAACCTGCCGCCGCAACAGCCCGCCGGGAACCTAGACGCTGTCACTAGCAGAGTCGTCTACTACACGCCAAAGAACGCGGTGAAGCCGAACAAGATGGTCACTCACACTTGCGGGCCCAAGTGCAAGCGCACCGACGTGCTGGCACTCAAGGATCTCAGGACATACAACCCGCTGGCCAAACCACTGCTCAGCGGCTGGGAGAGGCAGATAGTCCGCTACAAGGGCCACCGGTACCTGATACGGTATTTTATTGTCCCCTCACAGGCAGATAGTCCGCTACAAGGGCCACCGATAGTCCGCTACAAGGGCCACCGCTCGGTGATGTACCGCGCGCCGTGCGGCCGGCGGCTGCGCTGCCTGCGCGAGCTGCACGACTACCTGCGCGCGGTGGGCTCCGACATGGGGGTCGACCTCTTCGACTTCGGGCCCAACACGCACTGCCTTGCTGAGTTCGTGCTTAACAAGTGCATCGTCGGGAAAAAGGATCTGTCCCACGGTAAAGAGAACGTGCCAGTTCCGTGCGTGAACTACTACGACTCGAGTTTGCCCGAGTTCTGTTCGTACAACACGGAGCGCACGCCCACCGCCGGGGTGCCGCTCAACTTGGACCCCGCCTTCCTCTGCGGCTGCGACTGTACCGACGATTGCCAGGACAAGTCGAAGTGTGCGTGTTGGCAGATGACTCTAGAAGGGGCGCGAACCATCGGCATGGACGAGACCCAAGTCGGGTACCAGTACAAGAGGCTGCCCGACCCCCTGCCCTCGGGGATATACGAGTGCAACGTTAGGTGA
Protein Sequence
MSSGDGNKVSCSITEGNSELDPEKPNLESKEDPPSKLPLDGSGDHLPLSNTIVIPPIDQLQISTKILPEEVTASSNSCMVVENENSGKDIVEFNKLESDPVGKSTSESKDITEPPVATIITPEQTTSTEEIHIPSTKPTFLENITSLASEEVDSENQDEELILKWDDDDEEDNLLGKDDEIDKDTDNVKICPDPGENLINTNTGTDDDLNEIANISDEVVSTADEINKITSETVEVTKIADEVNTADKTNEENAFTADATDNITDATARGQGCLADIIGSAAEKVISADNVTDEVPNPTGNVANKTNIVIDETDATNVTNNTAVQSDNVIDESVSSVHQADNVVDVAVNIADDVAKNTNEIAHFVQEKVCSVSETNNVGNTANSDESKNIAEESMAVDDLPSKDVESITEIKSSEDDVPEDEQEDLLSEIDAQIAQLGASISKAENEEFKNIEKIKEISVTCSEIIKPEASISQEVIEIDMTEETTEQISNQTNVLSLELASEHKKENPVVIDEILQNIPESDNKQTKVEIEGCISHKSTDEVNPDRIEQNKTTTTAATDTIVTPMEIETGTCQTKDNTIEIPEEEIEKAPAYLKATGLEFDHNLDEALPKDTEMQANSTRIDCDDIEMTETFSKDASFAHDSSNSIEDNQHGVNKPNVMLEIPTQELIDLDESMISTQDTKSHLDETGSICVDLTDGNLESMSPNKESILENKTVGTEGLDNNVLVQQDSELSNKHIPDEANLKNDTVTKPDCPAQDTDKNKVITEKNIATDVVANPDQNESKDPAKLDDNSGSKTPLEPSASLEVNTTKVDVLKAADDISTTTSIVDEIIPIADQIQPTEASTSMDVQPATQMELQPNIDAFDDAAEVTDSLGLLAESSRVREEDDADVDADADDQETSEHDDDDEDYDPDDESSNQQTAEHSEEDSAQQLETDVVKTHPETETEVGDSTTKTDIAFELLKQMDQDTVPAESVDKVISETADKDAEFEISNVVTEDTKEAEGELDIDDEIVCEEPIFAFKVEIPSDNIEVEENEPDVDMGALKEPADDTTKEQPKEVPKEIPVKVYAAKKRDPSEPKAKTDDVTKSPSKKKLEIAKPKHVVNIVDLESSSEDEAAPKPTSAVTTEVTSVSISAAIDVVCSFDNGNTCSISSDQGETIITLPKRASATHTPTSRLNTSEITIKTATQTEPTLFIPETTMGASKDTPASKFGGLEVFTVDSDDEETAAPPPPASPLPSPPRSSKCATPGCAVAPSCSHYDVRRKRRAALCEQCVGLHYTRAANLVEGIKSGVSLLDLEEPPRSQELVEISDSDDDDDPGSKHKETIDEQTAGMLERDLADMINATWEKFKMDAKLKQAQDELTLDLERLEKESAEVCAMLDSCQVATDKLRGELYATFAVRRHSLPPYTIFDTPDRYFMCPEVAPVMKVTEEKSKKRRLSSASESQAKKSATTGTLADHREDDNKQDPKPESTPAAVDNSKMDDDKDISVVTLSAEAAPADLPPPGDVPRPPLRAGDTVYAMRSAFGSWIRAQVLEVTPKGTTPTTQNFSYCRIKYENKTSRNAYKILPARCLAYSEPSSVRMTIGTRVVAVFKDNSPDNKNSKRDSLSSGIVAEVPNPVNKYRYLVFFDDGYAQYVQHKDTRLVCECSALVWEEVHAFSREFVRQYLLDYPERPMVRLHTGQNLKTEWNGKWWLSRVLEVDASLVHVYFEQDKRTEWIYRGSTRLAPLYLELQAAEKHRNRLPRNRQSRLNMPYVEYTRLDEQENATPAEAQIKAQQEEIRRQRAVAKKSTTPNNLPPQQPAGNLDAVTSRVVYYTPKNAVKPNKMVTHTCGPKCKRTDVLALKDLRTYNPLAKPLLSGWERQIVRYKGHRYLIRYFIVPSQADSPLQGPPIVRYKGHRSVMYRAPCGRRLRCLRELHDYLRAVGSDMGVDLFDFGPNTHCLAEFVLNKCIVGKKDLSHGKENVPVPCVNYYDSSLPEFCSYNTERTPTAGVPLNLDPAFLCGCDCTDDCQDKSKCACWQMTLEGARTIGMDETQVGYQYKRLPDPLPSGIYECNVR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-