Timp018877.1
Basic Information
- Insect
- Teinopalpus imperialis
- Gene Symbol
- -
- Assembly
- GCA_029286865.1
- Location
- JAGSMU010000035.1:5615542-5618245[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-05 0.25 11.5 1.8 96 168 2 76 1 80 0.84 2 4 3.8e-05 0.62 10.1 2.0 110 167 81 138 73 148 0.47 3 4 4.2e-05 0.69 10.0 3.0 113 162 147 196 129 214 0.42 4 4 2.1e-05 0.34 11.0 1.7 109 169 213 273 206 277 0.80
Sequence Information
- Coding Sequence
- AtggaatcacaatacagatccATTGTCATCGCTCAAGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTGTAATGCACTCACCAATGAGTTGGACTGCACTCCTATGGCGGCGGGTACTCCGGCCACAGAGGCTATTCTGCCCCCGCAATCCATGTGGTGTCCGTCCCAAGCTACTCCTCCGGATACAGAAGTGGGTACCATGGCGGATACAGCGGTGGATACAGACATGGATACAGCGGTGGATACGGCCACGGATATAATGGTGGATACGGGGGTGGATACAGTGGCGGACACGGTGGCAGCTACTTAA
- Protein Sequence
- MESQYRSIVIAQECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNECNALTNELDCTPMAAGTPATEAILPPQSMWCPSQATPPDTEVGTMADTAVDTDMDTAVDTATDIMVDTGVDTVADTVAAT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01402483;
- 90% Identity
- iTF_01402483;
- 80% Identity
- iTF_01402483;