Timp005772.1
Basic Information
- Insect
- Teinopalpus imperialis
- Gene Symbol
- retn
- Assembly
- GCA_029286865.1
- Location
- JAGSMU010000010.1:334920-343112[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-19 1.4e-15 58.3 0.0 18 89 42 111 35 111 0.94
Sequence Information
- Coding Sequence
- ATGCGATTTGGCACGCTCTCCCGACTTTACGGCCCTTACCAAGTGCGCTGTAAACCCTTTACAGCCACGAACAGAGCGAACGCAACGATCTTACTTACGGCGCGCCTTACACCGCTTGTTTGCACTCCCATAAACCGGCTGCCCATAATGGCGAAGTCGGTTCTCGATCTGTACGAGCTATACAACTTGGTGATAGCCCGCGGGGGGCTCGTTGAGGTCATCAATAAGAAGCTGTGGCAAGAGATCATCAAGGGCCTACGACTGCCGTCCTCTATCACGTCAGCCGCATTTACACTTCGCACACAGTACATGAAGtatttatatgattatgaaTGCGAGAAGAAGAACCTGTCGACTCGCAGCGAGCTGGACGCCGCCATTGAGGGCAACAAACGAGAAGGTCGCCGAGCCTCCGGACAGTACGACGCCCAGGCTGCACTCGCTATGCCGTCGCTCAATCGCGGCGTGTCGTTGTCGATGCCGCTAGGTCAGCCGCTGGCGTTGCCGCTGGGTGGGGTACCGCGCCTGCCAATGCACGCGCCCCATCTACACAATCACGACATAGAGTTTCGCGTGCGCGAATACATGAAGATGATTCAACAGCAACGCGAGCTTCTTAGAAATGGCTCCGAATCGCCGCCGGGCAGCGGCACGATGCTGTCGCCGCGTGAAGCTGCGTTGAGTGCTATCGACGTATCACGACTCACGTTGTGGTCCCtctacaacaacaacaacaacagtcCGCAGCCCGACCTCGAGCCGCAGCGTGAGGCGTTGAATCTTAGCGAGAGCCCGAACTCGAGCGTGAGTGGCGGCAAGCGCGAAGCGTGCCGTTCACCCCCGCCGCCCGCGAAGCGGCGCACGCCTCGCCCGCCCTCACCCCGTGACACTCCGCCGCGGCATGTGCACACGCACGCCGCGCACGCCACTCACGCCGCGCACGCTACGCACGGCACGCACGCAGCGAACTTGAACGCACCGCAGCTCAATGGCAACGCTAATGGAATCAATAACGGCGTTAATGGAGCCGCTTTTAAGATCACCACCAGAGGTGACGCAACCAACGGTGACCAGCAACTGGTCGTCTCAATCGAGCTTAACGGAGTCACGTACGAAGGTGTCCTGTTCCCCTCACAAAATGGAAGCGGACAGAACGGTCACAGGCAAATGgtgtcttaa
- Protein Sequence
- MRFGTLSRLYGPYQVRCKPFTATNRANATILLTARLTPLVCTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVSLSMPLGQPLALPLGGVPRLPMHAPHLHNHDIEFRVREYMKMIQQQRELLRNGSESPPGSGTMLSPREAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQREALNLSESPNSSVSGGKREACRSPPPPAKRRTPRPPSPRDTPPRHVHTHAAHATHAAHATHGTHAANLNAPQLNGNANGINNGVNGAAFKITTRGDATNGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01154802;
- 90% Identity
- -
- 80% Identity
- -