Thag013105.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- rdx
- Assembly
- GCA_028673005.1
- Location
- CM054112.1:152829014-152833775[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.6e-37 2.6e-33 117.2 0.3 3 109 158 262 156 263 0.95 2 2 1.1 3.1e+03 1.1 0.0 78 109 263 294 261 295 0.87
Sequence Information
- Coding Sequence
- ATGTGGACCATAAATAACTTCAGTTTCTGTCGGGAGGAGATGGGTGAGGTCTTGAAGTCCTCTACCTTCTCAGCTGGAGCCAACGATAAACTGAAATGGTGCCTGAGGGTAAACCCTAAAGGCTTGGATGAAGAAAGCAAAGATTACCTCTCCTTATATTTATTACTAGTCTCCTGTAACAAATCAGAAGTCAGGGCCAAGTTCAAATTTTCCATTCTTAATGCCAAAAGAGAAGAGACCAAAGCAATGGAGAGTCAGCGAGCCTACAGATTTGTTCAGGGCAAAGACTGGggttttaagaaatttatacgCAGGGATTTTCTTCTAGACGAAGCGAATGGATTACTACCTGATGACAAGTTAACAATATTCTGTGAGGTGAGTGTGGTTGCAGATAGCGTAAACATCTCGGGTCAATCAAATGCTATACAGTTCAAAGTTCCAGAGTGTCGACTCTCTGATGATCTTGGCATGCTTTTTGAGAATCAGAAATTCAGTGATGTCACATTGGCAGTAGGAGGCCGAGAATTTCAAGCACATAAAGCAATTTTAGCAGCGAGGAGTCCTGTTTTTGCTGCTATGTTCGAGCACGAAATGGAGGAACGCAAACACAATCGGGTAGAGATAACAGATGTTGATCATGAGGTATTGCGGGAGATGCTACGTTTCATCTACACAGGAAAAGCAGCAAATCTTGAAAAGATGGCAGATGATCTTCTTGCAGCTGCTGACAAATATGCCCTGGAGAGGTTGAAAGTTATGTGTGAAGAAGCGCTGTGCACCAATTTGTCAATTGAGAATGCAGCTGATATCCTGATTCTTGCAGATTTGCACAGTGCAGACCAATTGAAGGCACAAGCAATCGACTTCATCAATACGCATGCAACTGATGTAATGGAGACAGCTGGTTGGAAGTCCATGATCCATTCTCACCCTCACCTCATAGCAGAGGCCTTTCGTGCCCTTGCGACACAGCAGATTCCTCCCATTGGACCACCACGTAAGCGAGTAAAGCAGAGCTGA
- Protein Sequence
- MWTINNFSFCREEMGEVLKSSTFSAGANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTIFCEVSVVADSVNISGQSNAIQFKVPECRLSDDLGMLFENQKFSDVTLAVGGREFQAHKAILAARSPVFAAMFEHEMEERKHNRVEITDVDHEVLREMLRFIYTGKAANLEKMADDLLAAADKYALERLKVMCEEALCTNLSIENAADILILADLHSADQLKAQAIDFINTHATDVMETAGWKSMIHSHPHLIAEAFRALATQQIPPIGPPRKRVKQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00154594; iTF_01567045; iTF_00995302; iTF_01212776; iTF_01095882; iTF_00946699; iTF_00731835; iTF_01131630; iTF_01309492; iTF_00396378; iTF_00715198; iTF_01308766; iTF_00362604; iTF_00630655;
- 90% Identity
- iTF_01047520;
- 80% Identity
- -