Thag053117.1
Basic Information
- Insect
- Tanypteryx hageni
- Gene Symbol
- -
- Assembly
- GCA_028673005.1
- Location
- CM054114.1:122818878-122828041[-]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-05 3.8 9.4 0.0 42 145 74 183 58 224 0.65 2 2 2.6e-09 0.00033 22.8 0.1 347 381 252 285 230 298 0.86
Sequence Information
- Coding Sequence
- ATGGAGGGACCATTCGTAAAAGAGTTGGGCGGCCCAAACACAGCTTTTATTAGACACCACCGTAGTGACGGTGTACCGCTTATCCCTGGGATAGAGCCAAGGAATGCGAGGTCGCGAAAGTTAGCTGTCAAAGGCGGCCAATCCTATTACCCTTACCCCACTTATCCCTCTGCCAAGATATTTCTCTTCGCCTCCGGGAGGCGGCGCGTGACGCCATCTGCTGAGGACAAGGTAACCAAGGAGATCCAGAGCAAGCTCGGTGTATATGACATTGTAATGCAGCAAATCTTAGAGGAACCCAAAGGTCTCATTGGAGTGGACCAGCCCATAGTCCCCCCCAGTCCCGCAACCAAGTTGCCCATTCCTCCATCTCATCCCCCTACGACTACTCCTCTCGTGACACCCGAGTTCACTCCACCCAAAAGGTCTGGAGTGGTTCCGAGGGCACACGTGGATAGCAAGAACCAGGTAGTGCCTTCCCGAGTTCCAAATGTCTTTCCCAAACCTGCCGAGAGCAAATACGGCCCCAGGGGTAGTAGTCATGCCCGTCACAATGGCGGTCCCATAATTACAAATGGTACATCCAAAGCATCGCCTCCCCATACGTCCAGCAACGCACTACATTCTGGAGGTCCTCCATCGAGAATGAACCAAGCTGGAAGGAATCTCCCGCGTATCACCGTGGGACAACAGTTACCTATACCTCCTCCCAGCATTGCCGGAGGGAATGCAGCTGCTGCTGGCAATGGAACCGCTGAGCTAGAGCATATTCTTAAGGAAATGACAGAAGTTACTCCTCCCCTCACTGCCATCGCAACACCTCGCAAGGAACCTGAATCTAAATTCACCTTCAATCCTTTGCTGCCCAAAGGCTTGAAGGATGTGAGCCTGGCGCCGCCTTCCAAAGCAGCTCTTTCATTGGTACGATGA
- Protein Sequence
- MEGPFVKELGGPNTAFIRHHRSDGVPLIPGIEPRNARSRKLAVKGGQSYYPYPTYPSAKIFLFASGRRRVTPSAEDKVTKEIQSKLGVYDIVMQQILEEPKGLIGVDQPIVPPSPATKLPIPPSHPPTTTPLVTPEFTPPKRSGVVPRAHVDSKNQVVPSRVPNVFPKPAESKYGPRGSSHARHNGGPIITNGTSKASPPHTSSNALHSGGPPSRMNQAGRNLPRITVGQQLPIPPPSIAGGNAAAAGNGTAELEHILKEMTEVTPPLTAIATPRKEPESKFTFNPLLPKGLKDVSLAPPSKAALSLVR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -