Tacr004003.1
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- -
- Assembly
- GCA_963506565.1
- Location
- OY735873.1:4994903-5004223[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.0046 0.3 12.2 1.0 3 23 207 228 206 228 0.96 2 23 9.3 6e+02 1.8 1.1 4 23 580 601 578 601 0.84 3 23 0.33 21 6.4 0.3 1 22 606 627 606 627 0.95 4 23 6.4 4.1e+02 2.3 0.3 1 22 668 689 668 691 0.82 5 23 0.16 10 7.3 0.5 3 21 702 720 700 721 0.91 6 23 0.017 1.1 10.4 0.2 3 23 771 792 769 792 0.96 7 23 0.0025 0.16 13.0 2.6 1 23 798 821 798 821 0.95 8 23 0.12 7.7 7.7 0.0 1 23 847 870 847 870 0.90 9 23 0.018 1.2 10.3 3.4 1 23 875 897 875 897 0.97 10 23 0.016 1 10.5 0.2 1 23 903 926 903 926 0.95 11 23 0.0035 0.22 12.6 0.8 1 23 939 961 939 961 0.98 12 23 0.00017 0.011 16.7 1.8 1 23 1011 1034 1011 1034 0.97 13 23 0.0088 0.57 11.3 5.9 1 23 1103 1126 1103 1126 0.96 14 23 0.0011 0.068 14.2 2.1 2 23 1153 1175 1152 1175 0.95 15 23 0.083 5.3 8.2 0.1 2 23 1181 1203 1180 1203 0.93 16 23 0.0095 0.61 11.2 0.2 1 21 1247 1267 1247 1268 0.95 17 23 0.0012 0.076 14.0 0.6 1 23 1278 1300 1278 1300 0.93 18 23 7.4e-05 0.0047 17.8 0.5 2 23 1387 1409 1386 1409 0.93 19 23 3.2e-07 2e-05 25.3 1.4 3 23 1416 1436 1415 1436 0.98 20 23 0.0027 0.17 12.9 0.3 1 23 1455 1477 1455 1478 0.95 21 23 0.14 8.8 7.5 0.0 1 23 1499 1521 1499 1521 0.98 22 23 0.02 1.3 10.2 0.5 1 23 1527 1550 1527 1550 0.95 23 23 0.00024 0.016 16.2 0.4 1 23 1559 1582 1559 1582 0.96
Sequence Information
- Coding Sequence
- aTGAATGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGATTTACAGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGGACCCCCCGTCCTTGCTTCGAAAATCAAGGATTGCGTGTCCGTTCAGATAAATGAAAATGACGACCTGCCAACGAATCTCTGCAGAAAATGCATGGACAATGTCAACAACTGGCACATATTTAAGACAGTATGTGAAAGGACACAAAACAAATTACagtcttttattaaaaaggaTGGCAGCCAACTGGAAGAGGTGAAAGTCAAGAGTGAACCTGTTTCTGATGAAACCTATGATGATGGAGTGGTTATTGATGGGTCATATCCTGATGCAGAGCATGCTGGCCCATCAACTAAATTACAGCCCGAAGGCCCACCAATCTTGGCTTCACTGGGGCTCACACCGAGGAGTGATAAGGGCATGGAGAGTGAAAAAGAGGATGAAGATGATGAGGACGATGAAATGCCTGATGCGACCCCAGCCTTCAAGAAGGCGGCTATGCCTGAGGTATCCATCACGGTGATGCGACCCACCGGGGAAACCCTGCACTCCCGCCAAGGTATTCAGCAGCTGGCGTCCAAGGACTGCCTCGTCTGCGGCCGATCCTATAGATACTCTCACAACGCTAGGCGACATGAACTCACCGCTCACAGCTTCGATAGGTACACCAACAAAACTACTACCAAAAAGTCACATTCCCACATGCAACCCAAACTGAGGCCAAACCCATTCAATCCCAAGGCACGATTGATGCCCAATCCGATTAGCCACAAAATGCAACTTATCCCCAAACCTGTACCTACTAAAATGGTTCAGCACAAAATTGTAGCTCCACCGAAACCCATACCCATAAAACCGTCGAAAGCACCTCAAAATAATTTGCCGTATCCTCTTCGCATTAAAGCCCTAAAAGATTTACAAATAAAGAAAAAAGAGCCGCAAATTTTGAAGACGTTGCTTACAGCAAAGCCAGAAGTTTTGGTGTCTGAACCGGAAATTATGAATTCTGCTCCAGAAAGTCCCGAGACTTTGATATCGGAGCCAGAAATAGCATCTTTCCAAGTGGAAACTATATTGTCTGAACCTGACGCGTATGACCAACAAATATGTGACGAAATTGATGGAGAAGTGCATAATCAAAGTCAGAATTATGATACTGTCGACATGGATTCTGACAATGAAATAGAGATAGCACGACAGAAAGAGAAAGAAGTCGACGAAAATAATGTTGACAACGAAAGTGACGAAGATATGCAAAACGATGGTGAAAATAACATGGAAACTAACCATGATGATGAAAAAGAACACAAGGAAGATGAGGATGAATCCCCAGAAATGGATAGTTCTGAGGCAAAACTTGACGATGACGGTAAAGATGACGAGGGCAGTGAAGAGCAAGACGAGAGAGAGAATGGTGAGCAAGAGGATAACGAAaatgaagatgatgatgatgaggatcTTCCGCCGATAGGATTAGCTCCAGTTGTTGAAATAAATGAGGATATACAGGCTAACTCGTGTAATAGCGAATTGAATGAGGAAGAGGAAGAGGAACTCGATGAAACAGGCGATGCCAATGATACTTTAGACGGCGAGGACGATGCCAAAGAACTGGACCCTGACAAACAATATGTTACGAAAACTCAGAGAGATTTCATTGAGAAATACCGTGACATTATCGAACAGGTAAATACAAAACGGTGTCTTTGCTGCGACCGAGAATATCCTCGCAGAAAAGCAGTCATCCAACATTTACAGAAAAATGGGCACAAGGTTCCAAAACATACATGCTATAATTGTGTCGTCACCTTCGGTCATATTGGCGCTTTGCTAAGCCACATGAGATCCAACGCTTGCACTAATTTGtggaaaataatttacaatgagAATGGTATAACTGAAGATTTGGTCCTAGAAGACGAAGTTAAAACCAAAGTCCAGTATAAAGATATATTTAATGCTAGGTCGTATGCTTGTAAATTGTGCCCAGCAAAGTTCCAGTTGAAACAGTTTATAATGAAACACGTGTTGGATGTTCATGAAGATGGCCAATCTAGAATACCACTAGCTTGTATCCACTGCGGTGCAAGATTCAAAGAGAAGACTATGTGGAAGAAACACATTCGTAATGGAGAATGCACCGTTTACATTGCTTGCGACTTGTGTTCGGATAAATTTGGAAATATGCAAGATTTTAATGATCACGCTTTAGCCGTGCATGCCGGCAGCTTCGATCAGGATAATCAAAGCAAATGCGTCGACGGGCGACCTACTGACTGTCCATTATGTGGAAAGAAAAACAGTAGCTATCCGAATTTGGTAAAACATTTGAAGATTATACACAATGAGGAGCAGCCTCATTACTGCCAGCATTGCGACTCCAAATTCGAACAGGCTACTGATCTCAACAAGCACATTTATGTGGCTCATTCTGAAAAGACTTTTGGTATTCAAAGCACCGAGCCGGATATGTCACTTGTGAAGGAGGAAGCTGAAGAGTATCACTATTCTTGTACGGAGTGTAATGCCATATTTGAGACCGTCGACGCATGGACCGATCACCAGGTCGCGGAACATAATCAGGTCGCTCATCATTGCGATCAATGTGAAAAGAAGTTCCTGAGGCCATCGGAACTGGCGGAACATAAGAATACACACTTACGGGTAAAGTTCTATCCTTGCAGCGTATGTACTAATTCGTATAGCACCCCCCAGAAACTATCGGAGCACGTCCAACAGGCTCACCCGGGTGCAGGCGCGCTAGCTGCTCTCGATTCGGAATTTTACTGTGATATATGTATCAGAGGGTTCAAAAGTCGCCAGGCTTACTCCAATCATATGCGTATTCACGCTAAGGTTCCGACCACTAACAGAAAGCCAGGTGAACAACAGAAAGGATTCGCACCACAGATAATCGGGAAACCTATCCAGCAGTTCAACGCCGCTGCACATCCAGGTTACATTTTCAAGCCAAATTGCAATGTTCCTAATGCTCCGTACTCCTGCGACATTTGTGGGAAAGGATTTATGCATAAGAAGAATATTTGGAAACATAAGAAGGTATTACATGCTGATCTCCTGAATGACAGGAATGATAGCGAAGAGAACACGATGCAGGCATCAACTGAGGAGGACGAATATAATATTGACGAGAATGGCACTGTGCTGTCAACGCCGCAGTTTAACAGTTTCAACTTTACCGCCTTGGCGAATAACGCCCAGGCACAGGCACAGCCACCGGTACAGCCACAAGTGCAAACACAAGCGGAGGTATACACATGCGATCTCTGCTATCAACGATTCTCGTTTAGACATAGTTTAAGGAAGCACAAACGCGCTAAACACGGAATCATAAATGCCGGCGCTGGTGGTAACAGCTCTGAAACACAGACACAAGCGCCATCAAGCGACGGCTCGAGGTCCAGTTGCACAATTTGTAAGATTACTTTCTCGGACAAAAAGTCTTATTATCGTCACCGCAAGAATGTCCACAAGTCAACGACGCAAATGTGTAAAATATGTGGCAAACCTCTCAATTCTACTTTGGAGTTATACGAGCATCTGAAAGCTGCTCATGCTCGGGAACTATTGGGCTACAATGCTAATCAGGGGTCCAGTAAATCGCAGGAAGTGGCACAGGAAATGGAGATGGAATATGAAGGTGATCAAGATTCCATCGACCCCAGCGTGGACTACCAAGCTAGGTACCCGTGCGACACCTGCGGCAAACAATTCGTGGGATTACTCGCTTTGCAGAACCATCAATGTATAAACCAGATTACATCGCAGCCTCAAACTTTCGACTGTGAGATTTGTCACAAGAGTTACACGTCTATCGCTGCGTTGAAGAGTCATCGCGGTTGGCACCTGCGCTCACCTGACGGTAAGGCTGCCGCCAACAATACCGGCCTCTGGATGCCTCAGCATAAGGTGACAAGTAAAGTAAGCAAACATGAGGTAGTCGATCCTGTTCAATTAGCTCGTGTTCAACATACAACTCCTGTGGCGACTGCGACTAAGAGGCGACTCCCACCAGAAGTGGAGGTCACTGTCGTGAACCCGAATAAAAAGTTGCGGTCTGATGATTCAGTAGACATGGATCAACAGAACAGTACAGAAGATAAGTATTGTACGATATGTGACAAGGAATTTACTAAGCGTGCAGCGTTCCAGCGCCACATGGATGAGGTACACCAACCGAACTCTGTGTTTTGTCCCGTTTGCGATAAGAGTTTCACTCGGAAATCGACGCTACTCGTCCACATGAAGAAGCACTATGAAAGCGGCGAGGGTAGTTCCTCTGCAACTGGCCAAATGGAAGATGATAATTATTCATGTGATCTTTGTGGCGTTCAGTACGATAATGCGCAGGCGTTGAGGGCTCATCGAGCGAGGCATCATGGTGAGGAGTCCGAGCATGATTCAGAGGACGATGACGGCGCTATTGCTCCACCAGGGGAGTTTACCTGCGCACAATGCGGGGACGGAGTGGCAACTCCACGGGACCTCATCGCCCACCGCTCAATGCACGCAACTCCCACTAAGTACTTCTGTAACATTTGCAAAGTTTATTTCGCTAGGGCTTTAGACCTCTCCTCCCACACGCGGGCGCGGCATTCGGAATCGGACAAGGCCGCCACATTTCCTTGTGCTATGTGCGACCGCTTCTACATGAACAAAAAGAGTTTACAGCGACACATTGAAATGGCTCACTGA
- Protein Sequence
- MNVNYDRVCRLCLSSRGDLQPIFPTTSSDDSGPPVLASKIKDCVSVQINENDDLPTNLCRKCMDNVNNWHIFKTVCERTQNKLQSFIKKDGSQLEEVKVKSEPVSDETYDDGVVIDGSYPDAEHAGPSTKLQPEGPPILASLGLTPRSDKGMESEKEDEDDEDDEMPDATPAFKKAAMPEVSITVMRPTGETLHSRQGIQQLASKDCLVCGRSYRYSHNARRHELTAHSFDRYTNKTTTKKSHSHMQPKLRPNPFNPKARLMPNPISHKMQLIPKPVPTKMVQHKIVAPPKPIPIKPSKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEIMNSAPESPETLISEPEIASFQVETILSEPDAYDQQICDEIDGEVHNQSQNYDTVDMDSDNEIEIARQKEKEVDENNVDNESDEDMQNDGENNMETNHDDEKEHKEDEDESPEMDSSEAKLDDDGKDDEGSEEQDERENGEQEDNENEDDDDEDLPPIGLAPVVEINEDIQANSCNSELNEEEEEELDETGDANDTLDGEDDAKELDPDKQYVTKTQRDFIEKYRDIIEQVNTKRCLCCDREYPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRSNACTNLWKIIYNENGITEDLVLEDEVKTKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRIPLACIHCGARFKEKTMWKKHIRNGECTVYIACDLCSDKFGNMQDFNDHALAVHAGSFDQDNQSKCVDGRPTDCPLCGKKNSSYPNLVKHLKIIHNEEQPHYCQHCDSKFEQATDLNKHIYVAHSEKTFGIQSTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQAHPGAGALAALDSEFYCDICIRGFKSRQAYSNHMRIHAKVPTTNRKPGEQQKGFAPQIIGKPIQQFNAAAHPGYIFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNDRNDSEENTMQASTEEDEYNIDENGTVLSTPQFNSFNFTALANNAQAQAQPPVQPQVQTQAEVYTCDLCYQRFSFRHSLRKHKRAKHGIINAGAGGNSSETQTQAPSSDGSRSSCTICKITFSDKKSYYRHRKNVHKSTTQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKSQEVAQEMEMEYEGDQDSIDPSVDYQARYPCDTCGKQFVGLLALQNHQCINQITSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPVQLARVQHTTPVATATKRRLPPEVEVTVVNPNKKLRSDDSVDMDQQNSTEDKYCTICDKEFTKRAAFQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYESGEGSSSATGQMEDDNYSCDLCGVQYDNAQALRAHRARHHGEESEHDSEDDDGAIAPPGEFTCAQCGDGVATPRDLIAHRSMHATPTKYFCNICKVYFARALDLSSHTRARHSESDKAATFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00027074;
- 90% Identity
- -
- 80% Identity
- -