Basic Information

Insect: Tachystola acroxantha
Gene Symbol: -
Assembly: GCA_963506565.1
Location: OY735881.1:5003982-5024078[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0024 0.16 13.0 2.9 1 23 427 449 427 449 0.97

2 20 0.0051 0.33 12.0 0.6 1 20 455 474 455 477 0.94

3 20 2.6e-05 0.0017 19.3 5.6 1 23 496 518 496 518 0.98

4 20 0.00023 0.015 16.3 4.7 1 23 524 546 524 546 0.99

5 20 4.5e-05 0.0029 18.5 5.3 1 23 552 574 552 574 0.97

6 20 1.4e-05 0.0009 20.1 7.3 1 23 580 602 580 602 0.97

7 20 1.2e-06 7.6e-05 23.5 3.5 1 23 608 630 608 630 0.97

8 20 0.00012 0.008 17.1 6.7 1 23 636 658 636 658 0.97

9 20 0.00012 0.0079 17.1 6.5 1 23 664 686 664 686 0.97

10 20 6e-07 3.8e-05 24.4 1.9 1 23 692 714 692 714 0.98

11 20 1.1e-05 0.00073 20.4 7.9 1 23 720 742 720 742 0.98

12 20 5e-05 0.0032 18.4 6.8 1 23 748 770 748 770 0.98

13 20 5.5e-06 0.00035 21.4 5.2 1 23 776 798 776 798 0.98

14 20 1e-05 0.00067 20.5 6.4 1 23 804 826 804 826 0.97

15 20 2.7e-05 0.0017 19.2 7.1 1 23 832 854 832 854 0.97

16 20 3.7e-06 0.00024 21.9 6.0 1 23 860 882 860 882 0.98

17 20 6.9e-05 0.0045 17.9 7.8 1 23 888 910 888 910 0.97

18 20 4.4e-06 0.00028 21.7 3.2 1 23 916 938 916 938 0.96

19 20 0.00067 0.043 14.8 0.3 1 23 945 967 945 967 0.96

20 20 0.22 14 6.9 5.2 1 23 979 1001 979 1001 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0024	0.16	13.0	2.9	1	23	427	449	427	449	0.97
2	20	0.0051	0.33	12.0	0.6	1	20	455	474	455	477	0.94
3	20	2.6e-05	0.0017	19.3	5.6	1	23	496	518	496	518	0.98
4	20	0.00023	0.015	16.3	4.7	1	23	524	546	524	546	0.99
5	20	4.5e-05	0.0029	18.5	5.3	1	23	552	574	552	574	0.97
6	20	1.4e-05	0.0009	20.1	7.3	1	23	580	602	580	602	0.97
7	20	1.2e-06	7.6e-05	23.5	3.5	1	23	608	630	608	630	0.97
8	20	0.00012	0.008	17.1	6.7	1	23	636	658	636	658	0.97
9	20	0.00012	0.0079	17.1	6.5	1	23	664	686	664	686	0.97
10	20	6e-07	3.8e-05	24.4	1.9	1	23	692	714	692	714	0.98
11	20	1.1e-05	0.00073	20.4	7.9	1	23	720	742	720	742	0.98
12	20	5e-05	0.0032	18.4	6.8	1	23	748	770	748	770	0.98
13	20	5.5e-06	0.00035	21.4	5.2	1	23	776	798	776	798	0.98
14	20	1e-05	0.00067	20.5	6.4	1	23	804	826	804	826	0.97
15	20	2.7e-05	0.0017	19.2	7.1	1	23	832	854	832	854	0.97
16	20	3.7e-06	0.00024	21.9	6.0	1	23	860	882	860	882	0.98
17	20	6.9e-05	0.0045	17.9	7.8	1	23	888	910	888	910	0.97
18	20	4.4e-06	0.00028	21.7	3.2	1	23	916	938	916	938	0.96
19	20	0.00067	0.043	14.8	0.3	1	23	945	967	945	967	0.96
20	20	0.22	14	6.9	5.2	1	23	979	1001	979	1001	0.98

Sequence Information

Coding Sequence: ATGAATCCGGAGCACCATAATATCAATACGGGTGGTGGCCAACCCCCTGGAAATTCCGAGTCTCAGAGTCAGAGGGTTCAGGCGGCCCAGCAGCAGCAGCAATCGAATCTGACGCCCACGACGTCTGCGACTGATCTTCGAGTGAACACGGCGGCCGTAAACGTTGCATTGTCTAGCGTCGCCAAGTATTGGGTGTTTACTAATCTGTTTCCTGGCCCAATACCCCAAGTGTCAGTGTATGGACTCCCCACAGGGGCTAGAATTGAAAATGGAAAGCCTGTCCAGGAGATTGGTCAACCTCATGCCAGTATACTGAATGGGGATCCAAACATCATTCTTGGACACCATGCTGGACAGCCGCAGGTCACTGTTTCAGGGCCGGGCGGTCAGCAAATTCCAGTTTCGCAAATTATCGCTACACAGTCAGGACAGACTCATGAAGCGCTGGTGGCCCACAGTCAACAGCAAGAGATGTCCCAGCAGCAGACATCGAGCAGCTCCTCTCAGATCACTGTGACCCCTGGCCAGTCCACCCACCAGCAGGTACCCAATAACCGGGTCGAGTTTGTTCAACACCATAACATTGATATGGGTCATCACTCCCAGCAGCACATAATGCAGCAGCAACTAATGGCGGCGACTCGGCCGGAGCACCCAAATCAACAGATCCAACTGACTGTCAGCGAAGACGGTATAGTGACGGTGGTGGAGCCAGGCAATGCTGGCAAACTGGTCGACAAGGAGGAAATGCACGAAGCCATCAAGATGCCCGGCGACCATACTCTCACCGTGCATCAGTTGCAGCAGATAGTCGGACAACAGGTACTAGACAGCGTGGTCCGCATAGAACAGGCTACCGGCGAGCCGGCAAACATTCTCGTCACCCACAACCCTGATGGCACTACGTCCATAGAAGCCAGCGCCGCCGATCCGCTTCTTGTGAAAGACGAAAAAGCCGCGGCAGCCGCTGGGAAGATCGAAACGGCACAGTTCGCTATCCCAGCGGAGATAAAGGACATAAAGGGCATTGATTTGAAGAGTGTGGGAGCGATGGGCATGGAAGGAGCTGTCGTAAAGATCTCAGGTGGCGCCTCCGAGCATGACATCCACGCCATGTATAAAGTCAATGTCGAAGACCTTTCTCAATTGCTGGCTTACCACGAGGTGTTCGGGAAACTCAACCAAGAGGGACAGCCGCAGCAAAACAAGGTGATCGCAGAAGTAGAAGTTGAAGCAGGGACCAGTGCTGCAATGTCAGAAGAGTCGTCGCCCGGACACCATTCGTGCGATCTGTGCGGGAAGTTATTCCAGTTCCGCTACCAGCTCATTGTACACAGACGATATCACGGCGAGAGCAAACCTTTCACATGTCAAGTTTGTGGATCTGCTTTTGCCAACCCTGTTGAACTATCAAGACATGGAAAATGTCATCTTGctGGTGATCCAGCAGAGCGACATGCGAAGAGATTGACACAGGACAAGCCATACGCATGCACGACTTGCCATAAAACATTTTCGCGTAAAGAGCATCTCGACAACCACGTTCGTAGCCATACGGGGGAGACTCCGTACAGGTGCCAGTTTTGTGCGAAGACATTTACTCGCAAGGAACATATGGTGAACCACGTACGGAAACATACCGGAGAGACTCCTCATCGGTGTGACATTTGCAAGAAAAGCTTCACACGCAAGGAGCACTTCATGAACCATGTCATGTGGCATACGGGTGAAACACCGCACCATTGTCAAATATGTGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGCGGTCTCATACAAACGATACTCCGTTCCGCTGCACGCTCTGTGGGAAATCCTTCACAAGAAAGGAACACTTCACCAACCACATACTGTGGCATACGGGTGAAACCCCTCACCGTTGCGACTTCTGCTCGAAGACGTTCACCCGCAAGGAGCACCTGTTGAACCATGTCCGACAGCACACGGGCGAGTCCCCGCATCGGTGCAACTTCTGCTCGAAGTCGTTCACGCGGCGCGAGCACCTCGTCAACCACGTGCGACAGCACACGGGCGAGACGCCATTCCAGTGCGGATACTGCCCCAAGGCGTTCACCAGGAAGGACCACCTCGTGAACCACGTCCGCCAGCACACGGGCGAGTCCCCCCACAAGTGCACGTACTGCACGAAGTCGTTCACGCGCAAGGAGCACCTCACGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGGTGCACCTTCTGCGCCAAGTCATTCACCAGGAAGGAACACCTCACCAACCATATCAGACAGCACACGGGCGAAACGCCACACAAGTGCACGTACTGCCCGCGCGCCTTCTCGCGCAAGGAGCACCTCAACAACCACGTGCGCCAACACACGGGCGACGCGCCGCACACGTGCTCCTACTGCAACAAGACGTTCACACGCAAGGAGCATCTAGTCAACCATGTGCGACAACACACGGGCGAGACTCCGTTCAAGTGCACATACTGCTCGAAGTCGTTTTCGCGCAAGGAGCATCTCACGAACCACGTGCACTTGCATACCGGGGAGACGCCTCACAAGTGCCCGTTCTGCACCAAGACATTCTCGAGGAAGGAACACCTCACCAACCACGTCAGAATCCACACCGGCGAATCCCCCCACCGGTGCGAGTTCTGCCAGAAGACGTTCACTCGCAAGGAGCACCTCACGAACCACCTGAAGCAGCACACGGGCGACACGCCGCACGCGTGCAAGATATGCGCCAAGCCGTTCACGCGCAAGGAGCATCTCATCACGCATATGAGATCGCACAGTTGCGGCGAGCGTCCGTACAGTTGCGGCGAGTGCGGCAAGTCGTTCCCGCTGAAGGGCAACCTGCTGTTCCACGAGCGCTCGCACAAGAAGGGCGCCTCCAACGCCGGCAACAGGCCCTTCCGCTGCGACATATGCAACAAAGACTTCTTGTGCAAAGGCCATCTCGTGTCTCACCGGCGCACGCATGCTGAAGCCGGCGAGGCGGTGGTGGACTCGCCCGCCGAGACAGAGGAGTGCACAGACATCAAGTGCGAAAAGGAACCAGTCGAACGCAAACCTGATATAAGAGTGTCGACGGAAAATAGGCCAGCGGAAGCGAACGTCGTGGTCCCGCAACATCAGCCTAACACCCAGCAACAAGCAGCTGCTGTGATGCAAATAACCAGCCAACAAGTTCGTACAGGCGTGCCTACGAGTACCACAGCGGTGGCTGGCACGTTCACCCACACGGCGAACGCTCAGCACCACCCGGGGACAGCCATCGCGCACCATCCGGTCACCGTCAACTACTAG
Protein Sequence: MNPEHHNINTGGGQPPGNSESQSQRVQAAQQQQQSNLTPTTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQEIGQPHASILNGDPNIILGHHAGQPQVTVSGPGGQQIPVSQIIATQSGQTHEALVAHSQQQEMSQQQTSSSSSQITVTPGQSTHQQVPNNRVEFVQHHNIDMGHHSQQHIMQQQLMAATRPEHPNQQIQLTVSEDGIVTVVEPGNAGKLVDKEEMHEAIKMPGDHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLLVKDEKAAAAAGKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISGGASEHDIHAMYKVNVEDLSQLLAYHEVFGKLNQEGQPQQNKVIAEVEVEAGTSAAMSEESSPGHHSCDLCGKLFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHAKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCTLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCTFCAKSFTRKEHLTNHIRQHTGETPHKCTYCPRAFSRKEHLNNHVRQHTGDAPHTCSYCNKTFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKICAKPFTRKEHLITHMRSHSCGERPYSCGECGKSFPLKGNLLFHERSHKKGASNAGNRPFRCDICNKDFLCKGHLVSHRRTHAEAGEAVVDSPAETEECTDIKCEKEPVERKPDIRVSTENRPAEANVVVPQHQPNTQQQAAAVMQITSQQVRTGVPTSTTAVAGTFTHTANAQHHPGTAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00806946;
80% Identity: -