Basic Information

Insect: Hofmannophila pseudospretella
Gene Symbol: -
Assembly: GCA_947369225.1
Location: OX376320.1:10120787-10139023[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2.2 2e+03 -0.7 0.0 18 26 427 435 421 438 0.87

2 18 0.015 13 6.3 1.6 5 30 484 509 480 517 0.77

3 18 0.013 12 6.4 2.6 6 38 513 545 509 546 0.75

4 18 0.039 36 4.9 2.7 5 33 540 564 538 574 0.81

5 18 0.0017 1.6 9.2 4.4 18 38 580 601 573 603 0.90

6 18 0.061 55 4.3 3.6 6 32 597 623 596 629 0.75

7 18 0.029 26 5.3 2.6 6 33 621 652 619 658 0.71

8 18 0.03 27 5.2 4.1 5 38 652 685 648 686 0.74

9 18 0.0023 2.1 8.8 0.9 6 38 681 713 680 720 0.83

10 18 0.031 28 5.2 5.4 8 38 711 741 706 742 0.80

11 18 0.038 34 4.9 5.9 13 38 743 769 736 775 0.81

12 18 0.17 1.6e+02 2.8 0.4 17 36 775 791 770 798 0.71

13 18 0.055 50 4.4 4.6 18 38 804 825 792 826 0.81

14 18 0.0044 4 7.9 2.7 5 33 820 848 818 854 0.81

15 18 0.012 11 6.6 2.4 6 33 849 876 848 882 0.77

16 18 0.00048 0.44 11.0 4.3 6 38 877 909 876 915 0.86

17 18 0.18 1.6e+02 2.8 0.3 19 39 917 934 912 936 0.76

18 18 0.012 11 6.5 0.8 21 38 942 960 941 962 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2.2	2e+03	-0.7	0.0	18	26	427	435	421	438	0.87
2	18	0.015	13	6.3	1.6	5	30	484	509	480	517	0.77
3	18	0.013	12	6.4	2.6	6	38	513	545	509	546	0.75
4	18	0.039	36	4.9	2.7	5	33	540	564	538	574	0.81
5	18	0.0017	1.6	9.2	4.4	18	38	580	601	573	603	0.90
6	18	0.061	55	4.3	3.6	6	32	597	623	596	629	0.75
7	18	0.029	26	5.3	2.6	6	33	621	652	619	658	0.71
8	18	0.03	27	5.2	4.1	5	38	652	685	648	686	0.74
9	18	0.0023	2.1	8.8	0.9	6	38	681	713	680	720	0.83
10	18	0.031	28	5.2	5.4	8	38	711	741	706	742	0.80
11	18	0.038	34	4.9	5.9	13	38	743	769	736	775	0.81
12	18	0.17	1.6e+02	2.8	0.4	17	36	775	791	770	798	0.71
13	18	0.055	50	4.4	4.6	18	38	804	825	792	826	0.81
14	18	0.0044	4	7.9	2.7	5	33	820	848	818	854	0.81
15	18	0.012	11	6.6	2.4	6	33	849	876	848	882	0.77
16	18	0.00048	0.44	11.0	4.3	6	38	877	909	876	915	0.86
17	18	0.18	1.6e+02	2.8	0.3	19	39	917	934	912	936	0.76
18	18	0.012	11	6.5	0.8	21	38	942	960	941	962	0.96

Sequence Information

Coding Sequence: ATGAATCCGGAGCACCACAATATAAATACGGGTGGTGGCCAACCCCCTGGAAATTCAGAGTCACAGAGTCAGAGGGTTCAGTCTGGTCAGCAACAGCAGCAAGCCAGCTTGACCCCTACGACATCTGCGACGGACCTGCGAGTGAATACAGCGGCGGTAAACGTTGCTTTGTCTAGCGTCGCCAAATACTGGGTGTTTACAAATTTATTCCCTGGCCCAATACCGCAAGTCTCTGTGTATGGTCTACCTACTGGAGCTAGAATCGAAAATGGAAAACCTGTGCAGGATATTGGTCAAGCCCATGCTAGTATACTGAATGGAGATCCTAACATCATACTTGGGCATCATGCTGGACAACCACAAGTTACCGTTTCGGGACCTGGGGGTCAGCAAATTCCTGTTTCTCAAATCATTGCTACACAATCTGGACAGACTCATGAAGCACTGGTGGCCCACAATCAACAGCAAGAGATGGCACAGCAGCAAACATCGAGTGCCTCCTCACAGGTCACGGTGACTGCAGGCCAGGCCACGCATCAGCAGGTACCCAATAACCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGACATCACTCACAGCAGCATATAATGCAGCAACAGCTGATGACTTCTCGACCAGAACATACCAATCAACAGATCCAGCTGACAGTCAGTGAAGACGGCATAGTGACGGTAGTGGAGCCCGGCGGTGGCGGCAAGTTGGTTGACAAGGAAGACATGCATGAGGCTATCAAGATGCCAGCTGATCACACCCTTACGGTGCACCAGTTGCAGCAGATTGTCGGGCAACAGGTGCTGGACAGCGTGGTCCGCATTGAGCAGGCTACCGGCGAGCCAGCTAACATACTGGTCACCCACAACCCTGACGGCACTACGTCTATTGAAGCCAGCGCCGCGGATCCGCTCATCGTGAAAGACGAAAAAGCCGCCGCCGCAGCTGGGAAGATCGAAACTGCACAGTTCGCTATCCCGGCAGAAATAAAGGACATAAAAGGCATTGATTTGAAGAGTGTCGGGGCCATGGGAATGGAAGGAGCAGTAGTGAAGATCTCAGGCGGTGCTTCGGAGAACGACATCCACGCTATGTATAAAGTGAATGTTGAAGATCTCTCTCAGCTGCTGGCTTACCATGAGGTGTTTGGAAAACTCAACCAGGAAGGCCAGACACCTCAAAATAAGGTGATAAATGAAGTGGAAGTGGAAGCGGGCACCAGTGCTGCCATGGCGGACGAGGCTTCGCCTGGCCATCACTCTTGCGACCTCTGCGGGAAGATATTCCAGTTCCGCTACCAGCTCATTGTGCACAGACGATATCACGGTGAGAGTAAGCCATTCACATGTCAAGTTTGTGGTTCTGCCTTTGCCAACCCGGTGGAACTGTCAAGACATGGGAAATGTCATCTCGCTGGTGACCCGGCAGAGCGGCACGCGAAGAGGTTATCTCAGGACAAGCCGTACGCCTGCACCACTTGTCACAAGACGTTCTCACGTAAAGAACATCTCGACAATCACGTCCGCAGCCATACTGGGGAAACGCCGTATAGATGCCAGTTCTGCGCGAAGACGTTTACCCGCAAGGAGCACATGGTGAATCACGTGCGCAAGCACACCGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCATGTCATGTGGCACACAGGTGAAACACCGCACCATTGTCAAATATGTGGAAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGGTCGCATACAAACGATACCCCGTTCCGCTGCACGCTCTGTGGGAAATCCTTCACAAGGAAGGAGCACTTCACCAACCACATACTGTGGCATACGGGTGAAACCCCACATCGCTGCGATTTCTGCTCCAAAACGTTCACTCGCAAGGAGCATCTGTTGAATCATGTTCGCCAGCACACCGGCGAATCCCCGCATCGCTGTAACTTCTGTTCGAAGTCGTTCACGCGGCGGGAACACCTGATCAACCACGTGCGCCAACACACGGGAGAAACGCCCTTCCAATGTGGATACTGCCCTAAGGCTTTCACTAGGAAGGACCACCTCGTGAACCATGTCCGCCAGCACACGGGTGAATCTCCCCACAAGTGCACGTACTGCACGAAATCGTTCACACGCAAGGAGCACCTCACGAACCACGTGCGCCAACACACCGGGGAATCGCCCCATCGGTGTACCTACTGCGCTAAATCGTTCACAAGGAAGGAACATCTCACCAATCATATAAGACAGCACACTGGCGAAACGCCTCACAAGTGCACTTTCTGCCCGCGCGCGTTCTCGCGGAAGGAACACCTGAACAACCACATCCGGCAGCATACCGGCGACGCGCCGCACACGTGCAGCTATTGCAACAAGAGCTTCACGAGGAAAGAGCATCTCGTCAACCATGTGAGACAACACACGGGCGAGACTCCATTCAAATGCACGTACTGCGCGAAGTCTTTCTCGCGCAAGGAGCACCTAACGAATCACGTGCATTTGCATACCGGGGAGACGCCGCACAAGTGTCCCTTCTGCACCAAGACTTTCTCAAGGAAGGAGCATCTCACCAACCATGTCAGGATACACACGGGTGAATCGCCGCACCGCTGCGAGTTCTGTCAGAAGACGTTCACTCGCAAGGAGCATCTCACGAACCATCTGAAGCAGCACACCGGGGACACGCCCCATGCGTGCAAAGTATGCTCGAAGCCGTTCACGCGCAAGGAGCATTTAATCACGCACATGAGGTACGTTAGTTTTGTACAATTCTGTCAGAAGACGTTCACTCGCAAGGAGCATCTCACGAACCATCTGAAGCAGCACACCGGAGACACGCCGCGTGCAAAGTATGCTCGAAGCCGTTCACGCGCAAGGACCATTTTATCACGCACATGTGATCACACAGCTGCGGTGAGCGTCCGTACAGTTGCGCCGAATGTGGTAAATCGTTCCCGCTGA
Protein Sequence: MNPEHHNINTGGGQPPGNSESQSQRVQSGQQQQQASLTPTTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDIGQAHASILNGDPNIILGHHAGQPQVTVSGPGGQQIPVSQIIATQSGQTHEALVAHNQQQEMAQQQTSSASSQVTVTAGQATHQQVPNNRVEFVQHHNIDMGHHSQQHIMQQQLMTSRPEHTNQQIQLTVSEDGIVTVVEPGGGGKLVDKEDMHEAIKMPADHTLTVHQLQQIVGQQVLDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKAAAAAGKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISGGASENDIHAMYKVNVEDLSQLLAYHEVFGKLNQEGQTPQNKVINEVEVEAGTSAAMADEASPGHHSCDLCGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPAERHAKRLSQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCTLCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLINHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHIRQHTGETPHKCTFCPRAFSRKEHLNNHIRQHTGDAPHTCSYCNKSFTRKEHLVNHVRQHTGETPFKCTYCAKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLKQHTGDTPHACKVCSKPFTRKEHLITHMRYVSFVQFCQKTFTRKEHLTNHLKQHTGDTPRAKYARSRSRARTILSRTCDHTAAVSVRTVAPNVVNRSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00806952; iTF_00994538; iTF_01401491; iTF_00674488; iTF_00355450; iTF_00027067; iTF_00027980;
80% Identity: -