Basic Information

Gene Symbol
-
Assembly
GCA_963506565.1
Location
OY735898.1:5833696-5845995[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-13 5.8e-10 40.0 0.0 3 89 222 295 220 295 0.89

Sequence Information

Coding Sequence
ATGGGGGACGAGGTCCTGGTGATTAATGAGAAGGTGGTCCTTAAAGCCGAGGACCTGTTGAGCTGGGTGTGCGATGGATCCGGCTGGAGGTACGGGCTCCGCGCGGTGTGGCGGGCGGCCTGCGCTCCCTCCACGGAACAAGGAAGGTCGGATCCGCTGCATCATACTAGGATGGACTTCAGCGATGTGGAGAGAGAAAAGAGCGCTATTGCTGTGGACTCAGAAACTCCTGGCGTGGTCGTCTTCTCTTACCCTCGCTATTGCCGCTACCGAGCGCTGGAGTCCAGGCTTGAAGGAATCCAAGCATCCTGGCTACGAGATTCTCTTGTAGCTGCGTTAGGAGGTTATGCAGCTCCCACCAAAAATACTAGGATATTGTATTGTAAGGATACATTCGAATACCCCGAACTGGAAGGCCACGAGTTCGTGTGCAACCACCTGGCGCCGCGGCTGAAGGGCCGGCcgcgcggccgccgccgccgcccgccgcgctcTCGCTCGCACTCGCCGTCCTCCCGCTCGAGCGACAGTGACGTCCCGCCGCCGCCTCAGTATCAACCTCCGGGGCCTAAGACTCCACGCCGCCTGTCACTACGCAACGGTGTCCCGGAGAAGCAGAGCGAGGGGGAAGACGACGAGAGGACGGAGGTGTCTCCTGAGGACCGCGCCTTTCTCCAGCAGCTGAGACAGTTCTACCGCGGGAGGAATGACACTTTCCGAATGGCGCACTCTTTGAAAGATTTATCTCTACGAGCGCTGTACGCGAGCGTGTCTGCGCGCGGCGGCTACGAGGCCGTGTGCCGGCACAAGTTGTGGCGCGTCATGTTCGCGGACAGACCGGCCAGGGTGCGCAACCACTACGAGAGATTTCTACTACCCTTCGAGAATCATGAACGAGAACGTAATGGGAAGCACCAGAGACCAAACGGACGAATAGACCAAAAACCAATAGCGACGATAGACGTAACCGATTCCCCTTTAAGAGAACTACCAGAGAAATCCCCAGAAAAACCGGACAAACCAGAAAAAAGACTCCGGACCCCATCTCCAAAACCAGAACTAGAGATAAAAGAAGATTTTAACACAACTTCTAAACCCGCAGAGGAATTGAATCAAGAGTTTTTGGATTCGCTACCAAAAGAAGAGAAACCGTTGAAATTAACGATTAAACCGGTTGAGAAGTTATTAGAGCCGGGGTATAATAACGTTTTGAAACTGTTCGAGGAGAATAGGGTTTTGGTGGCCGAGCTGGCGGCTAAGCATAGTGTGATGGATCCCAATAAAGTGATAGACGAAATTGGTAGTCGGAAATTGAGTGAAGGGAGTTCTACGTTTTTGAGTGAATTGGCGCAGAGATTGAATTTAGGTAACTCTGACACCACAATTCTGAAAGAGCTAGGCAAAGACCAGGAGTCGTCAGCCAGCGCTTTGACTAGCCTGTCCACACTAGGTGACAAGTACGCTGTCAACGGGCACGCCACCAACGGGGCGGGCACAACGCAACAGAAGAGCGCTCGTCCGGCCGGCCGCAGCTCTCTGCGTCACGTGCGAGTGAAGCCCACCCGTCCCTCTCACACCGCCGCTAACACTCCCCCCATCCCCCCTCTGAGGCCGGACTCGGGGTCGACGTCCAGCTCACCCCCCAGCGCGACCACCCCTGTCTCCGCGGCGCACACCCCCACCAACTTCGGCATACAGCGCCCGCCGCACGGGGGGAGCGATGACGAGATCGTGGAGGTACCCTACAAGCCAAAAACGCCAGAAATCATCGACTTGGACGAGTACCCAGAGAGTCCACAATCGCAAGTCAAGAAGAAAAAGCTAGACATTTTAAAAGAACGAGGGCTGGAAGTAACTGCTATTCCTACAACCGTTTGGGGGACCGTTCCGCCCCCCGTGCCCCTAGGCCTAGGGGGTATCAACCCCCCAATGATGCTAAACCCAGCCATGCAGCACCAAATAATGACCCAAGCATCAATATTCCAAATGTACAACATAATCCCTCAAAATTACGCCAACGGGATTCAACCCCCAAAAGTAATCCAAGCGACATGCATTTACGGGAATACTGGACCAGAAAAAACAGTTTACGGGAATCCAAAAGACCCTTACATGGAGCCCCCCCACATACTCCGTGGTACCCCAGTAAAAATCCAAAGAAACGTTGCTCCTCAACCAGAAATGAGACCACAAGACATTTTAGATTTAACCTGCAAAACTGGAGCACCGACTCCGAAACCAGCTGTAGAAATCGTCAGAATTCCCAATTCTCCTTCACCATCTAAATCTACACCTCAAAACTTATCAAAGAATTACACTTTGGTCGACGGAAAAGCCGTTGTGGGATCCAATTTAGAAATAACTTTAGTTAATCCAAAAGTTGCTACGCCTCCTAAGAATAGACCTCCTCAAAAACGGTCTTCTAACGGCAAATTTATCAGCACAAAAACTCCTACACCCCCAAAAGACTACCCAAAACCTTATCCAACCGCTTCAACTCCCAAAAAGAATCCTATAGTGGTTCCTAGCTATCAGATAACTCGAGACGACGTATCTCCTACCAGCTCGACAGGTTCCAGGGATTCTCAGACGAGCATGATGCAGAATGCCTTCAAAAACCAGCAGAGCTTATCCCAAATGATGGATATGCAGAAAGCTGTACCGACAATGTCACCTTACATGGACCCTTTGTATATGAGTGCTTTATACAACAGCTTGGCGGGACAAATGGACCAGCGACAACTAGCAATGTATAGGGAATTCATGGCCAATCAGTTTAGAGGATATTCCGGGCTGTTAGGCGCGGCGACGCCTACAACGAAGAATTAA
Protein Sequence
MGDEVLVINEKVVLKAEDLLSWVCDGSGWRYGLRAVWRAACAPSTEQGRSDPLHHTRMDFSDVEREKSAIAVDSETPGVVVFSYPRYCRYRALESRLEGIQASWLRDSLVAALGGYAAPTKNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRPPRSRSHSPSSRSSDSDVPPPPQYQPPGPKTPRRLSLRNGVPEKQSEGEDDERTEVSPEDRAFLQQLRQFYRGRNDTFRMAHSLKDLSLRALYASVSARGGYEAVCRHKLWRVMFADRPARVRNHYERFLLPFENHERERNGKHQRPNGRIDQKPIATIDVTDSPLRELPEKSPEKPDKPEKRLRTPSPKPELEIKEDFNTTSKPAEELNQEFLDSLPKEEKPLKLTIKPVEKLLEPGYNNVLKLFEENRVLVAELAAKHSVMDPNKVIDEIGSRKLSEGSSTFLSELAQRLNLGNSDTTILKELGKDQESSASALTSLSTLGDKYAVNGHATNGAGTTQQKSARPAGRSSLRHVRVKPTRPSHTAANTPPIPPLRPDSGSTSSSPPSATTPVSAAHTPTNFGIQRPPHGGSDDEIVEVPYKPKTPEIIDLDEYPESPQSQVKKKKLDILKERGLEVTAIPTTVWGTVPPPVPLGLGGINPPMMLNPAMQHQIMTQASIFQMYNIIPQNYANGIQPPKVIQATCIYGNTGPEKTVYGNPKDPYMEPPHILRGTPVKIQRNVAPQPEMRPQDILDLTCKTGAPTPKPAVEIVRIPNSPSPSKSTPQNLSKNYTLVDGKAVVGSNLEITLVNPKVATPPKNRPPQKRSSNGKFISTKTPTPPKDYPKPYPTASTPKKNPIVVPSYQITRDDVSPTSSTGSRDSQTSMMQNAFKNQQSLSQMMDMQKAVPTMSPYMDPLYMSALYNSLAGQMDQRQLAMYREFMANQFRGYSGLLGAATPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00806477;
90% Identity
-
80% Identity
-