Hpse000070.1
Basic Information
- Gene Symbol
- -
- Assembly
- GCA_947369225.1
- Location
- OX376336.1:812691-828013[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-13 9.7e-10 39.1 0.0 3 89 226 299 224 299 0.88
Sequence Information
- Coding Sequence
- ATGGCCTTTCCTCTGCATGACGAAGTCCTCGTAATCAACGAGAAGGTGGTCCTCAAGGCGGAAGACCTCCTCACGTGGGTGTGCGATGGCGCGGATTGGCGGCACGGGTTGAGAGCGGTGTGGCGCGGCGCGTGCGCACCGGCCGCCGAGCCGACGCGCACCGCGCCGCTGCACAGCGCCCGGCTTGATTTCAGCGACGTCGAGCGGGAGAAGCGCGCCATAGTTATCGACACTGAATCCCCTGGCGTGGTGGTGTTCTCCTACCCTCGCTACTGCCGCTACAGAGCCCTGGTCTCTCGACTGGAGGGCATCCAGGCTGCCTGGCTGAGGGATTCGCTGGTGGCTGCTTTGGGAGGCTATGCTGCACCTACCAGGAATACTAGGATATTGTACTGTAAGGACACGTTCGAGTACCCCGAGCTGGAGGGTCACGAGTTCGTGTGCAACCACCTCGCGCCGCGGCTGAAGGGCCGCCCGCGCGGCCGCCGCCGCCGGCCGCCGCGCTCTCGCTCGCACTCCCCCTCCTCCCGCTCCAGCGACAGCGACGTGCCGCCGCCGCCCCTCCCCCCGCGCCCACAGCCAGAGACCCCTCGCCGGCTATCTCTCCGCAACGGCGTCCCAGAGAAGCAGAGCGAAGGAGAGGACGAGGAGAGGGCGGAGTCTTCACCTGAAGACAGAGCCTTCCTTCAGCAACTGAAGCAGTTCTATCGCGCGAGGAACGAAACGCTCCGGATGGGACATTCTTTGAAAGACTTGTCGCTGAGAGGTCTCTACGAGAGCGTGTCGTCGCGGGGAGGGTACGAGAGCGTGTGTCGACACAAGCTGTGGAGAATCTTGTTCGGTGACCGACCGGCTCGAGTGAGGAATCACTATGAGAGATTCCTGCTCCCATTCGAAAATCACGAGCGAGAGCGAAACGGGAAACACCCGCGACCAAACGGAAAAATAGACGACCAAAAACCGATAGCCACCATAGACGTTACCGAATCACCTCTACGAGAGACCGCCCAAGAACCGCAAAAACCGGAAAACATCGAGAAAAGACTAAGAACTCCTTCACCGAAACCGGAAATAGAAAACAGAGACGATGTAGAACTAACATCGAAGCCTGCCGAAGAACTGAATAGAGAATTCCTAGAGTCGTTACCTAAAGAAGAAAAACCGGTGAAACTAACGGTGAAACCGGTGGAAAAGCTACTAGAGACGGGACACGGTGACAAGAGTAACGTGGTGAAGCTGTTTGAGGAGAATAGAGCGCTGGTACTGGAGTTGGGGAGTAAATATAACGTGGTGGATTCTAACAAGGTTATTGAGGAGATCGGAAGTCGGCAGCTCAGCGATAGCAGTACCATGTTTTTGAGTGAACTGGCGCAGAGGCTTAATTTAGGCAACACCGACACAACATTCCTGAAGGAGATCGCCAAGGTCCAGGAGCTGGCGACCAGCACCAGCAATGCTCTGAGCAACCTGTCCTCTTTCAGTGACAAATACGTGAACGGCCACACCAACGGCGGTAACACTGAACAGAAGAGCGCCCGCCCGGCCGGACGCAGCTCCCTCCGCCACGTGCGCGTGAAGCCCACACGACCGGCACACGCCGCCGCCAACACTCCGCCCATCCCGCCTCTCCGGCCGGATTCCTCGTCCACCTCCAGCTCGCCTCCCAGCGTGGCGACCACGCCGGTCTCTAGTGCTATGCCGATGGCCACCAACTTCGGGATCCAGCGCCCGCCGGCCGCTACCGGCGGACAGAGCGACGATGAGATTGTAGAGGTGCCCTACAAACCGAAAACACCAGAAATCATCGATCTAGACGAATACCCTGAAAGTCCTCAAGCACAAGTTAAGAAGAAAAAGCTGGACATACTCAAAGAACGCGGTTTGGAAGTCACAGCTATTCCCACACCCGCTTGGGGAACCGTCCCTCCCCCCGTTCCTCTAACACTAGGAGGTCTAAACCCCCCCATGATGCTGAACCCAGCCATGCAACACCAAATCATGACCCAAGCATCATTATTCCAAATGTACAACATTATACCCCAAAACTACGCCAACGGAATTCAACCCCCAAAGGTAATTCAAGCGACATGTATTTACGGCAACTCTGGACCGGAAAAAACTGTATACGGCAACCCTAAAGACCCCTTCATGCCCCCACCACACATCCTGCACGGAACCCCAGTGAAACCCCAAAGAACAGTCACGACTGAACCCCAAAAGAAACCGCAAGACATCCTAGATTTGACTTGCAAGTCTGTGTCGACTCCCAGTCAAAAACCAGCCGTAGAAATCGTAAGAATTCCATCAGCTCCTTCGCCATCAAAATCTGGTGCACAGAATTTATCAGCTAAGAACTACACGTTGGTAGACGGAAAAGCTGTCGTCGGATCCAATTTAGAAATAACGTTAGTCAACCCGAAGGTCACGACGCCCCCCAAGTCCCGGCCGCCGCAAAAGAGGTCTTCAAACGGGAAATTTGTCAGCACCAAAACGCCTACTCCACCGAAAGACTATCCAAGACCTTACCCGAGCCCTTCGACCCCGAAAAAAGCTCCAATCGTGGTCCCAAACTACCAAATCAACAGGGACGACGTGTCGCCAGCAAGTTCGACGGGATCCAGAGATTCTCAGACACCACACTTGCTGCAAAACGCTTTCAAAACCCAAAGTAACTTGACCCAAATAATGGATATGCAGAAATCTGTTCCGACAATGAGTCCATTCATGGATCCTCTATACATGAGCGCGTTGTACAACAGCTTGGCCGGTCAAATGGACCAGAGGCAGCTCGCTATGTACAGGGATTTCATGACCAACCAGTTCAGGGGATATTCCGGGCTGCTCGGCGCCGCGACGCCCACAACGAAGAATTAA
- Protein Sequence
- MAFPLHDEVLVINEKVVLKAEDLLTWVCDGADWRHGLRAVWRGACAPAAEPTRTAPLHSARLDFSDVEREKRAIVIDTESPGVVVFSYPRYCRYRALVSRLEGIQAAWLRDSLVAALGGYAAPTRNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRPPRSRSHSPSSRSSDSDVPPPPLPPRPQPETPRRLSLRNGVPEKQSEGEDEERAESSPEDRAFLQQLKQFYRARNETLRMGHSLKDLSLRGLYESVSSRGGYESVCRHKLWRILFGDRPARVRNHYERFLLPFENHERERNGKHPRPNGKIDDQKPIATIDVTESPLRETAQEPQKPENIEKRLRTPSPKPEIENRDDVELTSKPAEELNREFLESLPKEEKPVKLTVKPVEKLLETGHGDKSNVVKLFEENRALVLELGSKYNVVDSNKVIEEIGSRQLSDSSTMFLSELAQRLNLGNTDTTFLKEIAKVQELATSTSNALSNLSSFSDKYVNGHTNGGNTEQKSARPAGRSSLRHVRVKPTRPAHAAANTPPIPPLRPDSSSTSSSPPSVATTPVSSAMPMATNFGIQRPPAATGGQSDDEIVEVPYKPKTPEIIDLDEYPESPQAQVKKKKLDILKERGLEVTAIPTPAWGTVPPPVPLTLGGLNPPMMLNPAMQHQIMTQASLFQMYNIIPQNYANGIQPPKVIQATCIYGNSGPEKTVYGNPKDPFMPPPHILHGTPVKPQRTVTTEPQKKPQDILDLTCKSVSTPSQKPAVEIVRIPSAPSPSKSGAQNLSAKNYTLVDGKAVVGSNLEITLVNPKVTTPPKSRPPQKRSSNGKFVSTKTPTPPKDYPRPYPSPSTPKKAPIVVPNYQINRDDVSPASSTGSRDSQTPHLLQNAFKTQSNLTQIMDMQKSVPTMSPFMDPLYMSALYNSLAGQMDQRQLAMYRDFMTNQFRGYSGLLGAATPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01401065;
- 90% Identity
- -
- 80% Identity
- -