Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010748.1:79622191-79624472[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00052 0.14 15.0 3.5 2 23 227 248 226 248 0.97

2 13 2.1e-06 0.00056 22.5 3.4 1 23 254 276 254 276 0.98

3 13 5.1e-06 0.0013 21.3 1.1 1 23 282 304 282 304 0.99

4 13 7.3e-08 1.9e-05 27.1 0.5 1 23 310 332 310 332 0.98

5 13 0.00062 0.16 14.8 6.3 1 23 338 360 338 361 0.95

6 13 0.00015 0.04 16.7 2.9 1 23 447 469 447 469 0.98

7 13 7.4e-06 0.0019 20.8 3.8 1 23 475 497 475 497 0.98

8 13 3.3e-06 0.00088 21.9 1.6 1 23 503 525 503 525 0.99

9 13 4e-07 0.00011 24.8 0.5 1 23 531 553 531 553 0.98

10 13 1.5e-06 0.00039 23.0 3.6 1 23 559 581 559 581 0.98

11 13 1.5e-07 3.9e-05 26.2 3.2 1 23 587 609 587 609 0.98

12 13 6.5e-06 0.0017 21.0 0.2 1 23 615 637 615 637 0.99

13 13 0.17 44 7.1 0.2 1 23 644 666 644 666 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00052	0.14	15.0	3.5	2	23	227	248	226	248	0.97
2	13	2.1e-06	0.00056	22.5	3.4	1	23	254	276	254	276	0.98
3	13	5.1e-06	0.0013	21.3	1.1	1	23	282	304	282	304	0.99
4	13	7.3e-08	1.9e-05	27.1	0.5	1	23	310	332	310	332	0.98
5	13	0.00062	0.16	14.8	6.3	1	23	338	360	338	361	0.95
6	13	0.00015	0.04	16.7	2.9	1	23	447	469	447	469	0.98
7	13	7.4e-06	0.0019	20.8	3.8	1	23	475	497	475	497	0.98
8	13	3.3e-06	0.00088	21.9	1.6	1	23	503	525	503	525	0.99
9	13	4e-07	0.00011	24.8	0.5	1	23	531	553	531	553	0.98
10	13	1.5e-06	0.00039	23.0	3.6	1	23	559	581	559	581	0.98
11	13	1.5e-07	3.9e-05	26.2	3.2	1	23	587	609	587	609	0.98
12	13	6.5e-06	0.0017	21.0	0.2	1	23	615	637	615	637	0.99
13	13	0.17	44	7.1	0.2	1	23	644	666	644	666	0.93

Sequence Information

Coding Sequence: ATGGAGTCTCCTATAAATATGGAGGTTCAAGAAGAAAACTTTCCTGaAATCGAAGAACAGAACATTGATAATCCAGAAGGTACAATATCAGAAAATTTGAAAGaagcagttttaacaaaaaataatgatttatcgTTAGATTTATTACCAATGCAACAAGAAATTGTTCAGGCAAGCGTTggaattgaaacaaaaatgaatgAAGATATATCCCTAGCTTTACTACCTCCAGATGCTGATCAATTAGATGATGAAACGTTACTagcaaagtttttagaacaaactgaagaagaaaaaatggaagaaactgaaaaaatagaacaatctaagaaaaaagaagaaccaGAAAAATCTGATAAATTGAAATCTAAATCAGCAGATTTgatacagaaaataataaacggcATTCCTGGAGCGCGTAAAAGTGTCCCGCAAAGAGTAactgaagaaattataaaaaactgtatTGAATTTCAAGGATCTCGATTGAGCCTTGGAAGTATAATCAGAAATGTTGAAAATGGAACAATTGATCTAAAAAATCTTATAGATGTATCTGAAAAGGATGTtgaaaagcttttagaaaattttaaaaaagaagccAGGATATCTTTACCGCATTTAATAgccaaaaatatgataaaactaCCGAAAAGTAATGGAAAAGTTGAAGGAACCACGtgccaaatttgttttaaaaaatttaatgataaacaaACTCTCTTAAGACATTTCAGAAATCATAGTGGAATTAAGCCATTTGAATGTAtggaatgcaataaaaaatttaatagtaaattcaatttaaaagtgCATTATCGTACGCATACAGGTGAAAGACCATATAAATGTTTCGTATGTGACTTGGCTTTTACACAACAAAGCAGTTTAAATATGCATTTTCGAATACATAGCGGGGAAACTCCATTTGAATGCACGGAATGCGGGAAGCAATTTAAACAACAAGCAGAACTCAATACGCATTTGCGTGTTCACTCAGGTGAAAAACCATTTGCATGTCCATTCTGTCGTCAAAAATTTGCCCATcgtagtaattttattaaacataaacaaacgcATCATGAAGATGAAAgattaattgaagaaaacaaagatTTGGACGATAATACAACTGAATTGGATGAAGATAAAGATGAAGAAATGCAACCGAATAGATccaattctaatttaattaatgatatattaGTTAAAACATTAATGGGTGAAAAAAGCGAAAGCACTTGTAGTAAATATAATGTATCAATACCCGAATTGATTACCTTGAATATGATTAAGTTACCTGTAGTCAAAGATGGTGAACAATTACCGGAACGTccatttaaatgtaatttatgcgAAAAGGATTTTAAAGAACGACAAACTTTATTAAGACATTACCGTAATCACAGTGGAATTAAACCATTTACTTGCAGCGAATGCAGTAagcaatttagtaataaattcaaTCTCCAGGTGCATTTTCGTAGACATTCAGGCGAACGTCCTTATAAATGTACTGTATGCGATTTTCGATTTACTCAACAAAGTgctttaaatttacatttccGTATTCACAGTGGTGAAACTCCATTTGAATGTACGGAATGCGGTAAGCAATTTAAGCAACAGGCTGAATTGGAAGCACATAGTCGTAAGCACACTGGTGATAAACCCTACAGTTGCGATGAATGTACTAAAACATTTGCACatcaaagcaattttattaaacataaacgAGTGCATAGTGGGGTGAAACCTTATGAATGTAAGCAATGCGGGCAGAAATTTACGAATAAGAGTAATTTAAATAGGCATTATAAATTGCATACAGGGGAGAGACCATATACATGTGATATTTGTGGTAAGGGTTATATTCAGTTGGCTGATATGACGAGGCATTATAATACACATAATAAGACGAAAAAACGATTTAGTTGTATTACGTGTGGGcagaaatttgaaaatggaCAGTTGTTGCTTGATCATGCACAAACACATGTTAAAGATGAAGaaagtgattaa
Protein Sequence: MESPINMEVQEENFPEIEEQNIDNPEGTISENLKEAVLTKNNDLSLDLLPMQQEIVQASVGIETKMNEDISLALLPPDADQLDDETLLAKFLEQTEEEKMEETEKIEQSKKKEEPEKSDKLKSKSADLIQKIINGIPGARKSVPQRVTEEIIKNCIEFQGSRLSLGSIIRNVENGTIDLKNLIDVSEKDVEKLLENFKKEARISLPHLIAKNMIKLPKSNGKVEGTTCQICFKKFNDKQTLLRHFRNHSGIKPFECMECNKKFNSKFNLKVHYRTHTGERPYKCFVCDLAFTQQSSLNMHFRIHSGETPFECTECGKQFKQQAELNTHLRVHSGEKPFACPFCRQKFAHRSNFIKHKQTHHEDERLIEENKDLDDNTTELDEDKDEEMQPNRSNSNLINDILVKTLMGEKSESTCSKYNVSIPELITLNMIKLPVVKDGEQLPERPFKCNLCEKDFKERQTLLRHYRNHSGIKPFTCSECSKQFSNKFNLQVHFRRHSGERPYKCTVCDFRFTQQSALNLHFRIHSGETPFECTECGKQFKQQAELEAHSRKHTGDKPYSCDECTKTFAHQSNFIKHKRVHSGVKPYECKQCGQKFTNKSNLNRHYKLHTGERPYTCDICGKGYIQLADMTRHYNTHNKTKKRFSCITCGQKFENGQLLLDHAQTHVKDEESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01400591;
90% Identity: iTF_01400591;
80% Identity: iTF_01400591;