Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010748.1:79622601-79624472[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00048 0.13 15.1 3.5 2 23 177 198 176 198 0.97

2 13 1.9e-06 0.00051 22.7 3.4 1 23 204 226 204 226 0.98

3 13 4.6e-06 0.0012 21.5 1.1 1 23 232 254 232 254 0.99

4 13 6.7e-08 1.8e-05 27.3 0.5 1 23 260 282 260 282 0.98

5 13 0.00057 0.15 14.9 6.3 1 23 288 310 288 311 0.95

6 13 0.00014 0.036 16.8 2.9 1 23 397 419 397 419 0.98

7 13 6.7e-06 0.0018 21.0 3.8 1 23 425 447 425 447 0.98

8 13 3e-06 0.0008 22.0 1.6 1 23 453 475 453 475 0.99

9 13 3.7e-07 9.7e-05 24.9 0.5 1 23 481 503 481 503 0.98

10 13 1.3e-06 0.00035 23.2 3.6 1 23 509 531 509 531 0.98

11 13 1.4e-07 3.6e-05 26.3 3.2 1 23 537 559 537 559 0.98

12 13 5.9e-06 0.0016 21.1 0.2 1 23 565 587 565 587 0.99

13 13 0.15 40 7.3 0.2 1 23 594 616 594 616 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00048	0.13	15.1	3.5	2	23	177	198	176	198	0.97
2	13	1.9e-06	0.00051	22.7	3.4	1	23	204	226	204	226	0.98
3	13	4.6e-06	0.0012	21.5	1.1	1	23	232	254	232	254	0.99
4	13	6.7e-08	1.8e-05	27.3	0.5	1	23	260	282	260	282	0.98
5	13	0.00057	0.15	14.9	6.3	1	23	288	310	288	311	0.95
6	13	0.00014	0.036	16.8	2.9	1	23	397	419	397	419	0.98
7	13	6.7e-06	0.0018	21.0	3.8	1	23	425	447	425	447	0.98
8	13	3e-06	0.0008	22.0	1.6	1	23	453	475	453	475	0.99
9	13	3.7e-07	9.7e-05	24.9	0.5	1	23	481	503	481	503	0.98
10	13	1.3e-06	0.00035	23.2	3.6	1	23	509	531	509	531	0.98
11	13	1.4e-07	3.6e-05	26.3	3.2	1	23	537	559	537	559	0.98
12	13	5.9e-06	0.0016	21.1	0.2	1	23	565	587	565	587	0.99
13	13	0.15	40	7.3	0.2	1	23	594	616	594	616	0.93

Sequence Information

Coding Sequence: ATGCAACAAGAAATTGTTCAGGCAAGCGTTggaattgaaacaaaaatgaatgAAGATATATCCCTAGCTTTACTACCTCCAGATGCTGATCAATTAGATGATGAAACGTTACTagcaaagtttttagaacaaactgaagaagaaaaaatggaagaaactgaaaaaatagaacaatctaagaaaaaagaagaaccaGAAAAATCTGATAAATTGAAATCTAAATCAGCAGATTTgatacagaaaataataaacggcATTCCTGGAGCGCGTAAAAGTGTCCCGCAAAGAGTAactgaagaaattataaaaaactgtatTGAATTTCAAGGATCTCGATTGAGCCTTGGAAGTATAATCAGAAATGTTGAAAATGGAACAATTGATCTAAAAAATCTTATAGATGTATCTGAAAAGGATGTtgaaaagcttttagaaaattttaaaaaagaagccAGGATATCTTTACCGCATTTAATAgccaaaaatatgataaaactaCCGAAAAGTAATGGAAAAGTTGAAGGAACCACGtgccaaatttgttttaaaaaatttaatgataaacaaACTCTCTTAAGACATTTCAGAAATCATAGTGGAATTAAGCCATTTGAATGTAtggaatgcaataaaaaatttaatagtaaattcaatttaaaagtgCATTATCGTACGCATACAGGTGAAAGACCATATAAATGTTTCGTATGTGACTTGGCTTTTACACAACAAAGCAGTTTAAATATGCATTTTCGAATACATAGCGGGGAAACTCCATTTGAATGCACGGAATGCGGGAAGCAATTTAAACAACAAGCAGAACTCAATACGCATTTGCGTGTTCACTCAGGTGAAAAACCATTTGCATGTCCATTCTGTCGTCAAAAATTTGCCCATcgtagtaattttattaaacataaacaaacgcATCATGAAGATGAAAgattaattgaagaaaacaaagatTTGGACGATAATACAACTGAATTGGATGAAGATAAAGATGAAGAAATGCAACCGAATAGATccaattctaatttaattaatgatatattaGTTAAAACATTAATGGGTGAAAAAAGCGAAAGCACTTGTAGTAAATATAATGTATCAATACCCGAATTGATTACCTTGAATATGATTAAGTTACCTGTAGTCAAAGATGGTGAACAATTACCGGAACGTccatttaaatgtaatttatgcgAAAAGGATTTTAAAGAACGACAAACTTTATTAAGACATTACCGTAATCACAGTGGAATTAAACCATTTACTTGCAGCGAATGCAGTAagcaatttagtaataaattcaaTCTCCAGGTGCATTTTCGTAGACATTCAGGCGAACGTCCTTATAAATGTACTGTATGCGATTTTCGATTTACTCAACAAAGTgctttaaatttacatttccGTATTCACAGTGGTGAAACTCCATTTGAATGTACGGAATGCGGTAAGCAATTTAAGCAACAGGCTGAATTGGAAGCACATAGTCGTAAGCACACTGGTGATAAACCCTACAGTTGCGATGAATGTACTAAAACATTTGCACatcaaagcaattttattaaacataaacgAGTGCATAGTGGGGTGAAACCTTATGAATGTAAGCAATGCGGGCAGAAATTTACGAATAAGAGTAATTTAAATAGGCATTATAAATTGCATACAGGGGAGAGACCATATACATGTGATATTTGTGGTAAGGGTTATATTCAGTTGGCTGATATGACGAGGCATTATAATACACATAATAAGACGAAAAAACGATTTAGTTGTATTACGTGTGGGcagaaatttgaaaatggaCAGTTGTTGCTTGATCATGCACAAACACATGTTAAAGATGAAGaaagtgattaa
Protein Sequence: MQQEIVQASVGIETKMNEDISLALLPPDADQLDDETLLAKFLEQTEEEKMEETEKIEQSKKKEEPEKSDKLKSKSADLIQKIINGIPGARKSVPQRVTEEIIKNCIEFQGSRLSLGSIIRNVENGTIDLKNLIDVSEKDVEKLLENFKKEARISLPHLIAKNMIKLPKSNGKVEGTTCQICFKKFNDKQTLLRHFRNHSGIKPFECMECNKKFNSKFNLKVHYRTHTGERPYKCFVCDLAFTQQSSLNMHFRIHSGETPFECTECGKQFKQQAELNTHLRVHSGEKPFACPFCRQKFAHRSNFIKHKQTHHEDERLIEENKDLDDNTTELDEDKDEEMQPNRSNSNLINDILVKTLMGEKSESTCSKYNVSIPELITLNMIKLPVVKDGEQLPERPFKCNLCEKDFKERQTLLRHYRNHSGIKPFTCSECSKQFSNKFNLQVHFRRHSGERPYKCTVCDFRFTQQSALNLHFRIHSGETPFECTECGKQFKQQAELEAHSRKHTGDKPYSCDECTKTFAHQSNFIKHKRVHSGVKPYECKQCGQKFTNKSNLNRHYKLHTGERPYTCDICGKGYIQLADMTRHYNTHNKTKKRFSCITCGQKFENGQLLLDHAQTHVKDEESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01400592;
90% Identity: iTF_01400592;
80% Identity: iTF_01400592;