Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010747.1:67335127-67348944[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00012 0.031 17.0 2.4 1 23 381 403 381 403 0.97

2 18 0.0001 0.027 17.2 0.8 1 20 409 428 409 431 0.94

3 18 2e-05 0.0054 19.4 0.8 1 23 437 459 437 459 0.98

4 18 5.9e-06 0.0015 21.1 3.5 1 21 465 485 465 487 0.94

5 18 3.6e-05 0.0094 18.7 4.6 1 23 493 515 493 515 0.99

6 18 3.4e-05 0.009 18.7 5.3 1 23 521 543 521 543 0.97

7 18 3.6e-07 9.5e-05 25.0 5.0 1 23 549 571 549 571 0.98

8 18 1.3e-07 3.5e-05 26.3 2.7 1 23 577 599 577 599 0.98

9 18 9.8e-05 0.026 17.3 6.7 1 23 605 627 605 627 0.97

10 18 1.6e-05 0.0042 19.8 5.5 1 23 633 655 633 655 0.97

11 18 6.3e-07 0.00017 24.2 2.8 1 23 661 683 661 683 0.98

12 18 8.8e-06 0.0023 20.6 7.9 1 23 689 711 689 711 0.98

13 18 3.8e-05 0.01 18.6 9.1 1 23 717 739 717 739 0.98

14 18 2.3e-05 0.006 19.3 7.7 1 23 745 767 745 767 0.98

15 18 1.5e-05 0.0039 19.9 7.1 1 23 773 795 773 795 0.97

16 18 4.6e-05 0.012 18.3 0.9 1 23 801 823 801 823 0.98

17 18 0.035 9.1 9.3 5.1 1 23 833 855 833 855 0.98

18 18 2.2e-06 0.00057 22.5 0.8 1 23 861 883 861 883 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00012	0.031	17.0	2.4	1	23	381	403	381	403	0.97
2	18	0.0001	0.027	17.2	0.8	1	20	409	428	409	431	0.94
3	18	2e-05	0.0054	19.4	0.8	1	23	437	459	437	459	0.98
4	18	5.9e-06	0.0015	21.1	3.5	1	21	465	485	465	487	0.94
5	18	3.6e-05	0.0094	18.7	4.6	1	23	493	515	493	515	0.99
6	18	3.4e-05	0.009	18.7	5.3	1	23	521	543	521	543	0.97
7	18	3.6e-07	9.5e-05	25.0	5.0	1	23	549	571	549	571	0.98
8	18	1.3e-07	3.5e-05	26.3	2.7	1	23	577	599	577	599	0.98
9	18	9.8e-05	0.026	17.3	6.7	1	23	605	627	605	627	0.97
10	18	1.6e-05	0.0042	19.8	5.5	1	23	633	655	633	655	0.97
11	18	6.3e-07	0.00017	24.2	2.8	1	23	661	683	661	683	0.98
12	18	8.8e-06	0.0023	20.6	7.9	1	23	689	711	689	711	0.98
13	18	3.8e-05	0.01	18.6	9.1	1	23	717	739	717	739	0.98
14	18	2.3e-05	0.006	19.3	7.7	1	23	745	767	745	767	0.98
15	18	1.5e-05	0.0039	19.9	7.1	1	23	773	795	773	795	0.97
16	18	4.6e-05	0.012	18.3	0.9	1	23	801	823	801	823	0.98
17	18	0.035	9.1	9.3	5.1	1	23	833	855	833	855	0.98
18	18	2.2e-06	0.00057	22.5	0.8	1	23	861	883	861	883	0.96

Sequence Information

Coding Sequence: ATGAATTCGAATGATAATGGGCCCCTCACAGGGACACACAACAATGAAAATAGtgaagGTAATCAGAGGCCGCCTCCAACCACATCGTCTGCCACCGATTTGCGTGTCAATACGACTGCTTTAAATGCAGTTGCATTGAGTAGTGTTGCGAAATATTGGGTATTAACGAATTTGCTGCCAGGTCCTATACCACAAGTGTCTGTTTATGGGTTGCCAGGAACAACACGAGCAGATAATCAATCTGGAAAGGTTTCACAGGATCAATCTATGTTGCCTCAACATGGTGGTCTAATATCACCGGATAACATCCTTCTACCGCACAACTCGCAAATTCAAACATCAATTTCATCGAATCTCACAATACCGACGAGTACCATGCACATCGACAGCCAACAAAACGGCCACCAACTATCCAATCAACACCAACAATCAGACAACCAATCAATGGTTTCGCAACACAACCAAATgcaacagcaacaacaacaacaaaatcaacaaaacatggTTCAGGTTCAAGTACAAGACAACTTGGTTTCTGTAATCGAAGAAAGTAAAGATCAAAAGGATTTAATCGCGAATCAGTTAGTGCAAGCCCAATTACAATTGAATGAAAATCAACAATTAAGTCAACAGCAGGCATTGGCTGTACAACAATTGCAACAATTACAGGTTCAACAGGTACTCGATAACGTTTCCCGAATTGATTCTCAAGAATCGCAAAACAACGAAGATgataatttaatgcaaattaaagacgaaaaagtattacaaaattgCACTAAATTCTTCCTCCCAGatgttaaatctaatttaatggACGTTCGTACGGCAGATGgtagtattattaaaatctcCGCAGGCCTTCAGGAACAAGAGTTGGCGAAAACGATCGGCGTCGATATGGTTCAAAATATGTACAAAGTTAATGTTGATGAAATCAATCAATTGCTTGCATATCATGAAGTTTTTGGGAAGCTACAGGGTGAAATCACGGGTGCCACTACAATTGGACAGAATACGGGGAATagcaatatacagggtgttaataatTTACCAGTCGTTCCTAAAGCGTTGGATACAGAGGAGGCTTCTACTAGTGGGATCAATACTGATAGTCCGCCGGCTATTATTGCAGGTACACACGTTTGTGATTTATGCGGAAAAATGTTCCAATTCCGTTACCAACTAATTGTTCACCGCCGTTACCATACAGAACGCAAACCGTTTACATGCCAAGTATGCGGCAAAGCGTTTGTAAACGCGGCGGAACTAAGCCGTCACGGAAAGTGCCATTTAGGAGGTAGTATGTTTACCTGCGCCGTATGCTTCCACGTTTTTGCCAATGCCGCATCATTGGAACGCCACATGAAACGCCACTCGACAGATAAACCGTACGCTTGCAACATATGCGGAAAATCTTTTGCAAGGAAAGAACATTTAGAGAATCACACCAGATGTCATACAGGTGAAACGCCATACCGTTGTCAGTATTGCGCAAAAACATTTACGCGTAAAGAACACATGGTTAATCATGTTAGGAAACATACGGGTGAAACACCGCATCGTTGCGAAATTTGCAAGAAATCATTTACTAggaaggaacattttatgaatcaCGTCATGTGGCATACTGGTGAAACACCACATCAGTGTACGATATGTGGGAAGAAATATACAAGGAAAGAACATTTGGCGAATCATATGAGGTCGCATACCAATGATACTCCATTTAGATGTGAAATTTGCGGTAAATCTTTCACAAGAAAAGAACACTTCACGAATCACATAATGTGGCATACAGGAGAAACGCCACATCGTTGCGATTTCTGTTCGAAAACATTTACCCGCAAGGAGCACTTGTTGAATCACGTTAGACAACATACAGGGGAATCACCACATAGATGCGCTTATTGTTCGAAATCATTTACAAGAAAAGAGCATCTTATAAATCATGTACGACAACATACAGGTGAAACACCATTCCGTTGCAGTTATTGTCCTAAAGCATTTACGCGGAAAGATCATTTAGTGAATCACGTGAGACAACATACGGGAGAATCTCCGCACAAATGTACGTATTGTACGAAAAGCTTTACTAGAAAAGAGCATTTGACCAATCATGTTAGACAACATACTGGTGAATCGCCGCATAGATGTCATTTTTGTTCTAAAAGCTTCACGCGCAAGGAACATCTTACGAATCACGTTAGGATACATACAGGGGAATCACCGCATCGTTGCGAGTTCTGTCAGAAAACTTTTACCCGCAAAGAGCATCTTACGAATCATCTGAGGCAACATACAGGAGAAACTCCGCATTGTTGCAATGTATGTTCGAAACCATTCACCAGAaaagaacatttaataaatcACATGAGGTCACATACGGGAGAAAGGCCATTTACGTGTACGGAATGTGGAAAATCGTTTCCTCTCAAAGGTAACCTACTGTTCCATCAAAGGTCGCACAATAAGGGTGCTGCTGCTGATAGACCTTTTAGGTGTGATCTGTGTGATAAAGACTTCATGTGCAAGGGACATTTGGTGTCGCATCGGAGGTCGCATAGTGGAGAGAGGCCACACGCTTGTCCGGATTGTGGACGGACGTTTGTTGAGAAGGGGAATATGTTAagACATTTGCGAAAACATACAACGGAAAATCTGGCAGCGCCTCCAGCACAGGACGGCGCTACCCCgcaacaacaacagcagcagcaACCACCGACAGTTCAAACACCTCAATCAAGTGTAGCAAACGTGCAATTACCCCAGGTCTCTCAGGCCACATCGATGACGAGTCCCGTGACATCGGCCTCGATCGTACAACAAACATTAAACATgcaccaacaacaacaacaacaacagcagcagcaacaacaacaacaacagaatCCACATCCTGTTGTTGTTCCGACGGCTAACGGTAACGTCCTAGCTACTTACTAA
Protein Sequence: MNSNDNGPLTGTHNNENSEGNQRPPPTTSSATDLRVNTTALNAVALSSVAKYWVLTNLLPGPIPQVSVYGLPGTTRADNQSGKVSQDQSMLPQHGGLISPDNILLPHNSQIQTSISSNLTIPTSTMHIDSQQNGHQLSNQHQQSDNQSMVSQHNQMQQQQQQQNQQNMVQVQVQDNLVSVIEESKDQKDLIANQLVQAQLQLNENQQLSQQQALAVQQLQQLQVQQVLDNVSRIDSQESQNNEDDNLMQIKDEKVLQNCTKFFLPDVKSNLMDVRTADGSIIKISAGLQEQELAKTIGVDMVQNMYKVNVDEINQLLAYHEVFGKLQGEITGATTIGQNTGNSNIQGVNNLPVVPKALDTEEASTSGINTDSPPAIIAGTHVCDLCGKMFQFRYQLIVHRRYHTERKPFTCQVCGKAFVNAAELSRHGKCHLGGSMFTCAVCFHVFANAASLERHMKRHSTDKPYACNICGKSFARKEHLENHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHQCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCAYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFTCTECGKSFPLKGNLLFHQRSHNKGAAADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPHACPDCGRTFVEKGNMLRHLRKHTTENLAAPPAQDGATPQQQQQQQPPTVQTPQSSVANVQLPQVSQATSMTSPVTSASIVQQTLNMHQQQQQQQQQQQQQQQNPHPVVVPTANGNVLATY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00430030;
90% Identity: -
80% Identity: -