Tlur016627.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina lurida
Gene Symbol
-
Assembly
GCA_944452685.1
Location
CALYBZ010000864.1:490199-499653[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 9.5 9.2e+02 1.6 0.1 3 21 59 77 57 78 0.92
2 19 0.013 1.3 10.6 3.3 1 23 228 251 228 251 0.97
3 19 0.0031 0.3 12.5 1.0 1 23 257 280 257 280 0.97
4 19 0.0022 0.21 13.0 2.1 2 23 311 332 311 332 0.96
5 19 0.082 8 8.0 0.6 1 23 409 432 409 432 0.97
6 19 0.026 2.6 9.6 3.4 2 23 440 461 439 461 0.97
7 19 0.026 2.6 9.6 0.2 2 20 521 539 520 542 0.94
8 19 0.0047 0.46 11.9 1.6 1 23 615 638 615 638 0.94
9 19 0.0059 0.57 11.7 0.3 1 22 645 666 645 666 0.96
10 19 0.00018 0.018 16.4 1.6 2 23 721 742 720 742 0.96
11 19 0.0028 0.27 12.7 0.1 2 19 769 786 768 788 0.94
12 19 0.00069 0.067 14.6 5.7 1 23 835 858 835 858 0.98
13 19 0.0089 0.86 11.1 2.3 1 23 895 918 895 918 0.97
14 19 0.027 2.6 9.6 1.6 1 23 999 1022 999 1022 0.96
15 19 2.4e-05 0.0023 19.2 4.4 1 23 1032 1054 1032 1054 0.99
16 19 4e-05 0.0039 18.5 0.9 1 23 1099 1121 1099 1121 0.99
17 19 3e-05 0.0029 18.9 5.8 1 23 1127 1149 1127 1149 0.99
18 19 3.9e-05 0.0038 18.5 1.5 1 23 1155 1177 1155 1177 0.96
19 19 0.018 1.8 10.1 1.0 1 21 1183 1203 1183 1207 0.89

Sequence Information

Coding Sequence
ATGACGAATGAATGCTTTATTAATGGAGTGCAGTATAAATGTCGTACTTGCTTCAATCCTGCAGAAACAGTATATCCTCTTGCTGACGAATGCAGCAACTCCAGAACTTGGAAAGATTTGCTGAATGATATTGCTAACTTAAAGATAAACGAAGAGTTACTTCCAAAAACCATTTGTTCGAAATGTTTGGAAAAGCTTATCAGCTACTACGATTTTATACTTCATATTCAAAATGTGAATGAAAAGTACCACCAACTCTTGGAAAATGGCAAAAATTCTTCTCAAAATGATGATCTTGCCTGCAGCTCTAGTAATATTGCAGAATGCTTGGTAGAATCTGCAACTGCCATGCCTTTGGATCAGTATGTTTCGAAAATTAAGTTTGAAGACGAGCTAATCATGTCTTACGATATTGTCTTAAATAGTGACGATAGAAGAAACGATTCGGTCAAAGAAGATACTTTTGATCCTTATGTGGAATATTTCCAGGAGGATATTAAGCTCTCTGCAGATAACTTGCAATACCAACAAAGTTGTACATCTACTACCGCGGACGAGAGCGATTATCTGATTGAAAAAAGAAAGAAGAAAGATGTAATGAACAAGAGTGGTCAGCGATTCGATATAAAGAAGAATGGCGGAGATAAAATTGATGAACAAATTGAAAAAGTCCACGGTAATTTTGTATGTGCGGTGTGCAAAAAATCATTTACTATGCAGAAATTATGCCGCAGGCATATACTTATGAAGCACAGACAAAAACAATTGTTCCAATGCCAATTTTGCGACGGCATTTTTAAACATAAAGCCAATTTAATTCCACATATTAAACGAGTACATCCTGGCGAGTCATTTGAATCCAATACAAAACAATTAGTTCATTTGTTTGGGGAACGTCTGTATAGCAAACCTCTTTTATTACCACGAGCGGAATGTAAGCTGTGTGATTCTACTTTTACGAGTAAAAAAACACTTCTTCAGCACTTATATAAGCATAGTGAGGAAAGTACTCTTGATAGTTTAAAATTAAGCAGTGATGTTATTCAGCGTTGGTTTTCAAATATGAAGGATTTGCAAGTCGTAAAAACAATGATATGTAAGGATATTCGAGAAAAAAACTGGATCAAATATTATACAATTTTAAATGACTTTTCCTATGAAATGTCCATTAGTGATACGGATGCAGAAGATTTGGATGAACAAACAGAAGTGCCTGTCAACAATTATAAATGCGAATTGTGTGCAAAAGATTTTCTGTACAAATATCAAGCGTTTGCACATATGAGAGAGGATCATTTGAACGAAGACATTCCATTGAAATGCAGCCATTGCAATCTGGAATTTATATCAACAAAAATGTATGAACAGCACAAGCAAACTCACTGTGGGCATGAACATAAACTACTGAATTGCCAAAATTGTAATGGCATGTTTGTCTGGCTCGAAAGTATGAAAACACACAATTGTGTTACGAAAATATTAGATATTGAAAAATTTCTGAAAGATAAAATTAGTGTAAAATATAATGAAGTAATCCGTTCATCGCCAAAATCTATCATAAGATGTGGCCTTTGTGAAATGACATTTGAAAAATTGCGCGATTTACGACAACACATGCCATTGCACGCCGATGGCAAAACTGGAGTTGACTTTAATGGTTGTTTTTATGTAAATCAGTTTGAAAATTTAAACAGCAAACACGAATTGTTGCAACAGAAGATTAAGAATGCCTTTACGAAACGTCAAATAAGTCAACTGTATCAAGCCATCGATAAGGACGGCAAAGAAATGGACATTTCAGATTCGGATAGCGATGAAGATGATGCTGATGGTGAACAAAGCTATTTGTGTGAACTCTGCTCTGAAACGTTTAAAATGCGAAAACTGCTGTTTAATCATCAAAAGGAACAACATAAGGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAAGATGCAATACGTTAGTATTGACTTGTTACAACAACACATAAAGCGGGAATGTTGGAATGAACATCGAAGAGTAGCTGAACAATGCGATTGTTGTAAAGAACGTTTTATATGGCCGGAAAACATCTTGAGACATAAAGAAATACAGCGATACATACGTATCAAAAATTCGCTGTCTATGAACTTGTGTCGTGACAATATCCAAATTTGCTATTGTTTCTTATGTCCTAAAAATTTTTCTAATGCTGATCTTTTAAATGATCATTTGATGCGCCATCGGTTAACACCATCTGCAATCAAAACTGTTGCAAGCACAATACATTCTACATGGTGGCCAAATGGTAAAAAGATCATAAAATGCAAAATATGTGATCGAGAATTTTCAAGTATGGCCGAATTAAATGAACACTTCTCTCCAAAAAATCCTAAAAACTTGTGTGGTGCCAAGCAGCATTACCTGGCAAATTACTCGATTACTAACCAAATGGGGTTTGAATTACATTTAGAGCTGGATTCAGAGACAGAAACTGAAGAAAATGGTAATATATTGCCATATACATGTTGCATGTGTAGTAAATCATTTAAACGAAAGTTTCAAATAATTCAACATCAAAGATCCATGCACAATTATGAAATGTTTGAACTGAAATGTGAACGTTGTGCTTTTAGAACGGTATCAGAGaaagttttagattatcacagaatgagtcagtgctttgatgttgagaaaaaatatcaatgccatcagtgtaattttaaatttatgtggcaagagaaccttgaaaatcatatttcgatatttcataattcaaaTGTTTTCTTCAAAATATTGGATATAGCTAACACGACGTTTACAAATGTTCAATGCCTAGAAGTAAAAGAAGCTGCACAGAATGATATGCCATTAGCATTACATAAGAACCATTCAGATGCACATTCAGATTACATTCAGTCTAAGGATAAATTTCATTGTATAATTTGTGGAATTTACATAATCAAAAATGATTATTCAGAACATATTAGGAGACACAAAAATGGCAAATCTTACAATTGTACTCTTTGCGAAATGGTTTTTTTTAAACGTTTCGGTTTACTGAAGCATAGGAGCATGAGCCATAAGAGTTTATACACCGACGAGCGACCATATAGATGCACAATTTGTTCAAAATTCTATAGAAAATCGGGACATCTGTCCATTCATATGCGACGTCATGCAGATCGAGAAAAGAAAAAGCTAAACAATTTATCGACGCCAGACAAGAAAAAGTACCAGGTATGTCCATTTTGTGGTGTCTTTAGAGCAAATATTGATAtacatattagaagccacatggaggagacgccattcaagtgcgatctatgtggtaaaatctttaacaacgaagttaggttatatgtgcatcggcgcactcactttagtaaacgttcttttaaatgtaaactttgcgaaaaagcctatgtccataaatacctattaaatcatcacatgcgttctcacactggcgagcgtccatacgagtgcactgtttgtcagaaaaaatttatcaattcgcgcaatttgcagcagcattcgcttaatcatactggcaagaaagcgtttgtatgtgagatttgcaataaagcctttaaatgtgccccatatctcaggcagcatcgtgtcagaatgggccatcattcagaaAATAATTGA
Protein Sequence
MTNECFINGVQYKCRTCFNPAETVYPLADECSNSRTWKDLLNDIANLKINEELLPKTICSKCLEKLISYYDFILHIQNVNEKYHQLLENGKNSSQNDDLACSSSNIAECLVESATAMPLDQYVSKIKFEDELIMSYDIVLNSDDRRNDSVKEDTFDPYVEYFQEDIKLSADNLQYQQSCTSTTADESDYLIEKRKKKDVMNKSGQRFDIKKNGGDKIDEQIEKVHGNFVCAVCKKSFTMQKLCRRHILMKHRQKQLFQCQFCDGIFKHKANLIPHIKRVHPGESFESNTKQLVHLFGERLYSKPLLLPRAECKLCDSTFTSKKTLLQHLYKHSEESTLDSLKLSSDVIQRWFSNMKDLQVVKTMICKDIREKNWIKYYTILNDFSYEMSISDTDAEDLDEQTEVPVNNYKCELCAKDFLYKYQAFAHMREDHLNEDIPLKCSHCNLEFISTKMYEQHKQTHCGHEHKLLNCQNCNGMFVWLESMKTHNCVTKILDIEKFLKDKISVKYNEVIRSSPKSIIRCGLCEMTFEKLRDLRQHMPLHADGKTGVDFNGCFYVNQFENLNSKHELLQQKIKNAFTKRQISQLYQAIDKDGKEMDISDSDSDEDDADGEQSYLCELCSETFKMRKLLFNHQKEQHKDVSMPFTCKECKMQYVSIDLLQQHIKRECWNEHRRVAEQCDCCKERFIWPENILRHKEIQRYIRIKNSLSMNLCRDNIQICYCFLCPKNFSNADLLNDHLMRHRLTPSAIKTVASTIHSTWWPNGKKIIKCKICDREFSSMAELNEHFSPKNPKNLCGAKQHYLANYSITNQMGFELHLELDSETETEENGNILPYTCCMCSKSFKRKFQIIQHQRSMHNYEMFELKCERCAFRTVSEKVLDYHRMSQCFDVEKKYQCHQCNFKFMWQENLENHISIFHNSNVFFKILDIANTTFTNVQCLEVKEAAQNDMPLALHKNHSDAHSDYIQSKDKFHCIICGIYIIKNDYSEHIRRHKNGKSYNCTLCEMVFFKRFGLLKHRSMSHKSLYTDERPYRCTICSKFYRKSGHLSIHMRRHADREKKKLNNLSTPDKKKYQVCPFCGVFRANIDIHIRSHMEETPFKCDLCGKIFNNEVRLYVHRRTHFSKRSFKCKLCEKAYVHKYLLNHHMRSHTGERPYECTVCQKKFINSRNLQQHSLNHTGKKAFVCEICNKAFKCAPYLRQHRVRMGHHSENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01074722;
90% Identity
-
80% Identity
-