Svit022842.1
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- Ibtk
- Assembly
- GCA_958431115.1
- Location
- OY288109.1:101678954-101684358[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4e-11 9.8e-09 36.4 0.3 2 86 594 673 593 679 0.85 2 3 1.1e-14 4.3e-12 47.2 0.2 8 107 735 837 726 840 0.78 3 3 4.9 2e+03 0.0 0.1 58 109 822 871 815 872 0.75
Sequence Information
- Coding Sequence
- ATGCCAGATACAGTAACAGTTAATTTTACCCATTCAAACTATAAGCATCTACAAAAGTTCTATCCATTTGAAGAAATACTGATAATGGATACCTTAAAAAACACTGCCACCTTGCAGACACAGGCTCATAATATTAAGTATAGCGTCAACAACTTTGAGTACGATTGCACCAAAAAATGTAGATCCAACTCTCATGGCCAAGAAATAACAGCTGCCCTAACCAAACGAGCTGTGGAAGATAACAAACTAGCCGCTTTCATAGCTAAAAAATGCTGTAATTTTTGCGACATCACAGATCCACTAgggCGATCGGCAGTTCATATGGCGGCATCTGTCGATCGTTATATAATTCTTGAGTGGCTATTGAatcagGGAGCTATAATCAATAGCAGGGATGCAGAAAGTGGCAGTAGTGCTCTGCACAGATCCATTTACTATGGCTGCATTGATTGTGCTGTACTCTTGCTTCGGTACGGAGCCAGCATGGAACTTCTAGATGATGACACACGGAGTCCGCTTCAAAACTGCTGTCGACTCGGTGATTTCTCAAGACATTTGGATAATCCCAAAAATACAGAACTCCTTGCCTGGGGATCGAATAAAAACTACAATCTAGGAATTGGCAATGAAGAAGGTTCATTAACACCTCAATTCATCGACTTCTTTCGCAAGGAACAAAAGTCAATCGAAATGATATCATTGAGTTCATATCACAGTATGTTTGTCGACAAAAAAGGTCAACTTTATGCAGTGGGACATGGCAAAGGAGGTCGATTAGgaAATGGAACCGAAAATAGTTTGCCAGTTCCAAAAAAAGTCAAAGTACCCATTAAGAATGCCGGAGAGAAGATTATTTGCATAAGCACTTCAAAAAAACATACGCTTGTTCTTACCAACAAGAGTGCAGTTTTTGCTTGTGGCTTGAATGAAGACATGCAACTTGGAGTTCGTGATTGTCCCGCAAAATTGACGGCATTTAAAGAAGTCGTTACCCTCAGAGATTTTGgggtagaaaatttaataagagttATTGCCAGAGATTTTCATTCGTTggcttattcaaaaaatatgctTTGGGTGTGGGGTACAAATTATGGACAGTTCGGTTGGAGTAGTAATAGCGAAGCTAGTGTTCCTGTTCCACGACAGGTAGCATTACCTGAAAAGGTGGAACTGAAGTTTGTTGAATCAAATAATTATGCCATTACATGCTATACAACGGCCAAGACGATTTTACTATTCTacaattataaaatgaaaagcaTTAAACCACCACAAATAGAAGCAATCAAAAGCATATCAGTGGTTGGTGGCGGTAACAATACAAAAGCATCAAAAGGTTTGGTAACAGCCCTTAAACTTCTCATGTTAACAGAaacaaatgttgtttttatttggtatGAAATGTCTCAGCAATATCTCAGATGTATGTTTCCCCATATTCGTGTTAATGAAATCGACAAAATATTCTTTAAGGGTCATCAGGTGTTGATTCTATCGCAAGGCGATGTCTACACCGGCAAATGCCATCAAGTGCCAGTTCAAAATTATCAAGAAAGCAGTGCAGATGCTTGGTTCACAGACACTCAAACTCGCAAAGATATTTGCAATGATCAAAAGATTCGTATTGAATTGACACGAATACCCCAATTAGATCGTGTTGTGGATGTTTTTTGTGATGATGATTTTACGTCATTTGCTGTGCTTCAAGAAAACtatgcaaattattttgttctacCGAAACTTATAGACGAAGAGTATAGTTTTAAGAAACTTCTTAACGATGCTAGCGAATTTGATAATGTTCATGACTTGGTTTTCTATGTAGATGGAGAGAATTTCTACGTACATAAATTTATAGTGTTTTCAAGATCTGCTGGATTGCGGGAAATAGTTGAGAAGCATCCGGAtaagaaaattcatttgaatattaaattgatgTCGGCTAAAATATTTGAGTTAATCTTGAAGAACATTTATACAAACTATTTTATTACGGAAGAtgATCTCGATGATATACAGCAGTCCTTGGGACATGAATGTCCAAGCAAAAGGGATAAGATCCTCGAGCTGTTTGTTAGCtttgttgaaaaattccaaCTCAACAGTTTAGCGAACTTCATAAAAAGCCATGCAAATGAACTTCCACGATTCGTGGACAGATCTAAATACCGGTTCAACAGCCTCAAACGTGCGGATTTCCAAAAACTTTACGATGTTACCATCCGATGTGCTGGAGATGTTGAAATTTATGCTCACAAGTGCATTTTAGTCTCGAGGCTCGAATACTTTGACTTGATGTTCACACACACCTGGTCAGAGAGCACCACCATTAATTTGTCTACAGTACCACCGGAATACATGACTCCAATAATAGATTTTCTCTACACATTAAATGGGGATagttttcgaaaagaaaatcattcggAAACATTTCTCTACAACATGGTAGTATATTGTGATCAATTTTTTATCGACCAACTACGAAAAGTTTGTGAAATTTTATTGCTGGAAAAGATCAATATACGAAAGTGCGGTGAAATGTTAGACTTTGCATGTCTTTACAATTGTGGCGTTCTGAAAACGGGTTGTTTAAATTTCATCTGCCAAAATATGTATAGAGTTCTTTCACAACGAACCCTCGAATGCTGTGAGCCAGAAGCGTTAAATGCCATTAATGCACATTATCGACAAATGTTTAAGGAAGTATTTGATTACCGATTGATAACTCCTGACTCAGAGGCAGTTGATGATGAGTCTTTGCTAAGTTTCGTGGATGATTTCGAGGTAGATTTGGAATATAGAATGGAAGAGGACGACACGATTAAGacgcaaacaaaaataaagcagCGGGAAAGTAAATTTTGGAGAAGTACGCGACAACATGAACAGGATGCTATTAATTCAATGAAAGAAATGAATTTACAAGATTCAAGAAAAGACAGCGTGTCAGAAAAGTCAAAGGTTATACAAGAAGCAGATGAAGGATCGTCCAAAATCTACAATGAGTACAAATCATGGCTGAAAGTTGCCGATAAGAAAGACATAAAAAATAAGTCAGTCGTTGCTGCGGTGAATGCAAATGAAGTTCTTAAAGTTGAACCAAAACCTAAGGAAGCACTAGTTCCTCTAACTCCACGTGTTGAGAAAGTGAGCTCACCAATAGAAACAACTCCTACAAAAGAGTTCAATATCAACTTAGCGGATTTCACACCAATTAAGTCTGAAAAACTTTCGCAAAAACAGAGAAAAAGACTCTCGagcgaaacaacaacaacaattactcCTTCTAAACCAGTTGATGTACCCCCAGCCAATAGACCCAATGCTTGGGGTATCAGTAGTCCCCCAGTTAATGACTTGGATTCATCATTCCCTACTTCATATTCGAGTTTAACGAACGAGTCTCCATTAAAACCAGGACCATCTCCATCGACGAGTCGTACAagttttagcaaaattttaGAGGATGAGAAAAAGCAGCGAGAGTATGTTGATAGAATGCGCAATAAATCGTTGGTTTTGACACAAATCGAGGAAACTGCCATAGCTGAGTTGCGAAAATTTTACAATGTTGACAATGCAGCTGATGAAATTATaacaattgaaagaaaaaaaagaccaGTGACTACGAATTTCGCCATATGGCAAAGAAATTAA
- Protein Sequence
- MPDTVTVNFTHSNYKHLQKFYPFEEILIMDTLKNTATLQTQAHNIKYSVNNFEYDCTKKCRSNSHGQEITAALTKRAVEDNKLAAFIAKKCCNFCDITDPLGRSAVHMAASVDRYIILEWLLNQGAIINSRDAESGSSALHRSIYYGCIDCAVLLLRYGASMELLDDDTRSPLQNCCRLGDFSRHLDNPKNTELLAWGSNKNYNLGIGNEEGSLTPQFIDFFRKEQKSIEMISLSSYHSMFVDKKGQLYAVGHGKGGRLGNGTENSLPVPKKVKVPIKNAGEKIICISTSKKHTLVLTNKSAVFACGLNEDMQLGVRDCPAKLTAFKEVVTLRDFGVENLIRVIARDFHSLAYSKNMLWVWGTNYGQFGWSSNSEASVPVPRQVALPEKVELKFVESNNYAITCYTTAKTILLFYNYKMKSIKPPQIEAIKSISVVGGGNNTKASKGLVTALKLLMLTETNVVFIWYEMSQQYLRCMFPHIRVNEIDKIFFKGHQVLILSQGDVYTGKCHQVPVQNYQESSADAWFTDTQTRKDICNDQKIRIELTRIPQLDRVVDVFCDDDFTSFAVLQENYANYFVLPKLIDEEYSFKKLLNDASEFDNVHDLVFYVDGENFYVHKFIVFSRSAGLREIVEKHPDKKIHLNIKLMSAKIFELILKNIYTNYFITEDDLDDIQQSLGHECPSKRDKILELFVSFVEKFQLNSLANFIKSHANELPRFVDRSKYRFNSLKRADFQKLYDVTIRCAGDVEIYAHKCILVSRLEYFDLMFTHTWSESTTINLSTVPPEYMTPIIDFLYTLNGDSFRKENHSETFLYNMVVYCDQFFIDQLRKVCEILLLEKINIRKCGEMLDFACLYNCGVLKTGCLNFICQNMYRVLSQRTLECCEPEALNAINAHYRQMFKEVFDYRLITPDSEAVDDESLLSFVDDFEVDLEYRMEEDDTIKTQTKIKQRESKFWRSTRQHEQDAINSMKEMNLQDSRKDSVSEKSKVIQEADEGSSKIYNEYKSWLKVADKKDIKNKSVVAAVNANEVLKVEPKPKEALVPLTPRVEKVSSPIETTPTKEFNINLADFTPIKSEKLSQKQRKRLSSETTTTITPSKPVDVPPANRPNAWGISSPPVNDLDSSFPTSYSSLTNESPLKPGPSPSTSRTSFSKILEDEKKQREYVDRMRNKSLVLTQIEETAIAELRKFYNVDNAADEIITIERKKRPVTTNFAIWQRN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00974881; iTF_01318369; iTF_00664994; iTF_00664221; iTF_00335208; iTF_00188331; iTF_00984395; iTF_00427409; iTF_00665842; iTF_00426515; iTF_00894103; iTF_00694812; iTF_00693963;
- 90% Identity
- -
- 80% Identity
- -