Svit008463.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Syrphus vitripennis
Gene Symbol
Rel
Assembly
GCA_958431115.1
Location
OY288108.1:100700010-100702614[-]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.4e-44 5.3e-40 138.2 0.5 1 168 23 207 23 208 0.94
2 2 2.9 1.8e+04 -3.5 0.0 127 153 669 695 651 700 0.60

Sequence Information

Coding Sequence
ATGCAAATTGATAAATTTCGTTCTCCCGGTATCTACGTTAACGCCAATATGAACACAACTCCTCAACTAGTTATCCTAGAACATCCAGTTGATAAATTTCGTTTTCGTTACAAATCGGAAATGCATGGCACTCACGGATCTCTAACTGGAAGTCGCTCTGTAAAGCCCAACAAAACCTATCCGGAAATTGAACTCAGAAACTTCAATAAATCAGGAATTATTCGTTGTAGTTTGTATCAAACGAATACAACTAAACCATCATTGCACTCGCATTTGCTAGTTGTTCACAAAGAAGACAAGGATGTGAACGATCCTCATGATGTATGCGTTTCCCCAGAATTGGGCTATATTGTTCGATTCGAAAATATGGGCATAATTCATACAGCCAAAAAAGATGTGGCCAAAGAACTTCTACAGAAAAAAGTtcagaaattgaaatttgatgtGCAATGTGAAGAACTTTCAATGAAACTGTTTAAATCCTTGCGAGACGAAGCCGATAGAGAAGCTAAGCTAATGAATCTAAACCAGgtTTGTCTTTGCTTTGAAGCATTCGAACTCATTGATGAGAGACATTATAAAAGAATCTGCGAGCCAGTTTACTCCAATCCCATTAATAATCTCAAAAGCGCTCTTACAGGAGAATTACGAATATGTCGTCTGAGTATTTCTACCGGTAGCGTCGAAGGGAATGACGATTTAATACTTTTAGTTGAAAAggtcaacaaaaataacataaaagtACGTTTTTTTGAGTTGTCAAATGATGAGGAAGTGTGGGAAGCCCATGGATCTTTCACTGAAGCTGATGTGCATCATCAGTATGCTATTGTCGTTCGAACACCACCATATAGGGACAAAGAGATCGATAATCacgtaaatgttttcattgagtTGGTTCGCGAGAGTGACAACAAACGGAGTGATCCAATTCCTTTTCGATACAAACCAAAAAGTATTGTTATGTCACGAAAACGCCGAAGAGTTTCAAATTCCTCATCTTCGTTAAATTCAACAAGTCCTTCAAACTCATTCGAAATACCCGAAACGATGCCAcagcaaatacaaaaattaaaacttgagCCACGAGCATCTTCTATAAGCGAGGAGTCGAGTGGTTGCGGCACATATGAATCATCCGAGTCGAATGAATATGTATGTGAATTTAATACTTTCATGCAACAATGTGATGTTGATTCGGATGAATTAAATAAGTTACTGCAGGAACCAATTTTTTCGAGCACATATTTCGGTATGTGGGATAATGATCTTCAAATTGATGGTGAGGGTAGTATAAGGAGAACAAATAAACAACTTGCATTCCATCCTGCATTGAAACTATTAATACAAACATTCAATGACTGCTCAGagattggatttgaaaaaaccatcaaaagaatcaaattaattttctacaGTTACACTGCTCAAAATGACAATGCCAACACTATTATTCATGACCTATGCAAAAAATCCAATCAACGAGAAGCtgcaatagtttttaaaatattatcaaagCTTAATCTCACTCATTTGTTTCGCCATAAGAATAATAACCTACAAACTCCATTGCATGTAGCTTGTTCAGTTGATCAGCCTATCTATATAAGACCATTGATAGGTTTTATGTGTGACCCTAATGTTCAAGATATCGATGGCAATACACCTTTACATATTGCTGTCCGTGATAATTTATTGCAATGTTTTGAGGAATTAGTTTCTAACATAACGTCAAGTAAACTTAACGTCAATCTTATCAACAACGATGGCATGACTCCATTGCATATGGCTATACGAAAGAACAACATTGAATTTGTTAGAATTCTTCTCTTTAAGTGTAATGCCTCGGTTAAACTTGCAAACTGTCGCGATGGTAATAACGCTTTGCATTTGGCAGTTCAACAGGAAAATTCGgatattgttaaaattatattgGAAAGTTCCGATCCgtcaaatttaaatatcacaAATAGAGCCAGTCACACAGCTATTGACTTAGCAAAGGCTCTAAAAAATCCAAAACGCGATGAAATTCTAAACATCTGTAGTTGTTTTTCAACAGCTTTTGTGGATGACCAAAAAGATCACAACGAAAGTAGCAATTCAAGTGGAGAAGATGACATCATGACTGTGATGAATGTTAATTTATCAGAAAAAGAAGAGAAGTTGATTAGAGCACAAATTCAAAAAGATCCGTACCTTTGCAAGAATCTTGTAAAGATATTGACCATTGATggtaaatggaaaaaatttgtTAGAGAACTAAAATTAGACCATTTACTTTGTATTTGGTCAAATGCTGAAGCCATGTTAAAAGATGTTCTAGAAGGTGAGGAACacgtaaaattattgaaagtcttTTATGCCTTGCAAGCAGTAGATGAAGAAGCAGCCAGTTTTATGTCTTCGTACATAATGAAACATTTAAATCATGtttag
Protein Sequence
MQIDKFRSPGIYVNANMNTTPQLVILEHPVDKFRFRYKSEMHGTHGSLTGSRSVKPNKTYPEIELRNFNKSGIIRCSLYQTNTTKPSLHSHLLVVHKEDKDVNDPHDVCVSPELGYIVRFENMGIIHTAKKDVAKELLQKKVQKLKFDVQCEELSMKLFKSLRDEADREAKLMNLNQVCLCFEAFELIDERHYKRICEPVYSNPINNLKSALTGELRICRLSISTGSVEGNDDLILLVEKVNKNNIKVRFFELSNDEEVWEAHGSFTEADVHHQYAIVVRTPPYRDKEIDNHVNVFIELVRESDNKRSDPIPFRYKPKSIVMSRKRRRVSNSSSSLNSTSPSNSFEIPETMPQQIQKLKLEPRASSISEESSGCGTYESSESNEYVCEFNTFMQQCDVDSDELNKLLQEPIFSSTYFGMWDNDLQIDGEGSIRRTNKQLAFHPALKLLIQTFNDCSEIGFEKTIKRIKLIFYSYTAQNDNANTIIHDLCKKSNQREAAIVFKILSKLNLTHLFRHKNNNLQTPLHVACSVDQPIYIRPLIGFMCDPNVQDIDGNTPLHIAVRDNLLQCFEELVSNITSSKLNVNLINNDGMTPLHMAIRKNNIEFVRILLFKCNASVKLANCRDGNNALHLAVQQENSDIVKIILESSDPSNLNITNRASHTAIDLAKALKNPKRDEILNICSCFSTAFVDDQKDHNESSNSSGEDDIMTVMNVNLSEKEEKLIRAQIQKDPYLCKNLVKILTIDGKWKKFVRELKLDHLLCIWSNAEAMLKDVLEGEEHVKLLKVFYALQAVDEEAASFMSSYIMKHLNHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00893632;
90% Identity
-
80% Identity
-