Spip019469.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- Rel
- Assembly
- GCA_905187475.1
- Location
- LR994572.1:84219231-84222569[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-49 4.2e-45 153.9 0.6 1 168 74 259 74 260 0.90 2 2 2.9 1.9e+04 -4.5 0.5 113 119 426 432 416 459 0.48
Sequence Information
- Coding Sequence
- ATGGATCAGAAGCAATTTGTTGGCGACAACTCGAATTTTATGTCGGTCCCATCGCCAACCTCATCACAATCATCGATGTCATCAACAACCTCAGGATCATCTTTTCACAGTGGATATTGCTACACATCTCCCGAGACAGATTACAACACGGCTTTTACATCGATTCCTACAAGGAACTTAAATGCGGCACACTTCTCGCAAGACTCCTTCACATGCCAGCTGGCCATACTTGAGGAGCCAACTGAAAAATTCCGATTCCGCTATAAGAGTGAAATGCATGGAACACATGGCTCCTTAAACGGAGAACGTTCATCCAAAACTAAGAAAACCTTCCCCGAGGTGGAGTTGAGGAATTTCATGGGATCAGCAGTAATCCGATGCAGTTTATATCAAACAAATTTGGATAAGCCATCACCTCATTCCCATCAGCTGGTCGTACGGAAGGAGGACACCGACCAGTGTGACCCGCATGACGTGTACGTTTCACAGGAAAAAGGCTACATTGCACGATTCGAGAATATGGGGATTATACACACCGCCAAAAAGAATATTTGTGATGCATTATATACAAAAAAGAAGCAAAAGATGATGTTCGAGATGGGCCTAACCGAGTTGTCACAAAGGCAGGAAAAACAGCTCAGAGATGAGGCCGAACGTGAAGGAAAACTGATGAACTTAAATCAGGTGCGCCTATGCTTTGAAGCATTCAAAATCGACGAGGGCAGCCGTGTATGGGAACGGATATGTAACCCGGTCTATTCCAGGCCGATAAACAACCGAAAAAGTGCTCTCACAGGCGAATTAAAAATCTGCCGTCTTAGCGCAGTTGCAGGCAGCGCAGAGGGCAAAGAAGATCTAATTCTACTTGTTGAGAAAGTCAGCAAGAAAAATATACAAGTTCGATTCTACGAAGTAAGCGATGATGATCAAGTGTGGGAAGCATTCGGAGAATTCTCCGACACGGATGTTCATCATCAGTACGCAATTGTGGTGCGTACGCCGCCGTATAAAAACAAAGATATCGATTCGAATGTAAATGTCTTCATCGAGCTCGTGCGCAAGAGTGACGATGAGAGAAGTGCCCCAGTAACTTTTCGGTATAAGCCAAGAGACGTTGTAATGTCACGCAAGCGTAGACGAACGTCATACCAATCGAACACATCGAGCCCTGTAAGCTCGTCCGAGTTACCCGTCCCAGTGGCCGTAGTTATTCCACAGGGACATTTTCAACATCCCCAGTACCCACAGCAGCAACAACAACACCAAACACACCATCAACAACATCAAACACACCAACAACAAACAATAAGTCAGGAGTTCGATAAGGACCTTCAATTGAACTTGCTACTGCAAAGTGTCACGGAGAATAATTCAGATGAGCTTGCTAGGATGCTGCCACTGGACTTTATAATGTTAGATGCCAATGGCGATGAACTATCAGTTGATGGTGGAGCAACGGTTATGCGCGATAGTATGCCAGCGAATACTCCGAGGCTGGTCCATGACGGAGTTGCAAAACAAAGTGTTCGGCTGGAGAAGAAAATTCCAAATCAAAATCTGAAGTTGCGACATCCAAAAATGAAATCTCTCCTTTCCGCGGCTAACGATCCGAAACTAACCACAAAGGAACAGGCAGAAGCTATTCAAAAAATATTCGACGACTATGTGGCCGAAAACGACGCTGAAGATACGATAATGCACGACATTGTCAAGAACGACTATTTGACAGACGGAATGCTACTTGTGCGATTGTTGCAAAAGTACAATCTCATCGAATTGTTGTCCCAAACAAACCACAAAGGCCAAACACCACTGCACGTGGCCTGCATATTCGATCAGCCTTTCTTCATTCGTCCGTTGCTCGGCCAAAAATGCGATCCTAACATCCAGGACTCTAACAACAACACTGCGCTGCACATCGCCATTGCCGAGAACCTTAAGCAGTGCCTGGAGAGTTTTATTATATACATCAATTCGAATAAGTCGAACCTCGATGCTAACCTCGCAAACGACAAGGGCTTCACCCCACTGCACCTGGCCATACGAGCGAACAACATCGAGCTCGTGGAGATTCTCCTCCGAAAAGGCAACGCTTCAGCAAAAACCGCCATCTCATCGGATGGAAACAACGCGCTGCATCTGGCCGTTCAATGCAAAAACAAGCGGATGGTCAAGTGCCTCCTCGACAACACTGACGTGAGAGTCAATGCCAAAAACCGATCTGGCCACACAGCTATCGATCTGGCGAAGGCCATAGTATCTGAGACCGAGAAAAAGGAAATCCTCGACCTATTACTACCAAAGCTTCCACCTTCAGAGGCCAGTGAGGGTGATGCCATGTCAATTGACTCCATCAAAGATGAACCAGACGATGACAGCTCACCGGACGAGGACGAAGAACGCTCAGAAGTCGAAGAAAAGAATGAAGAGGTGTGTTTCATTGAGTTGCTAAAAGCTGAAAAGACTAAGACTCTTTTGGCGAAGCTCCTTAACGTCGATAACAAATGGAAGAAACTTAGCACTGAACTGCAAGTGAGTCACTTAACGTGCCTTTGGGTGAATGCCGATGCAATGTTGATCTATTTGTACGACAACGTGAGTCCGCTAAAATTGTTCACTGCCCTGCAAGCAGTCGATCCAAGCATAGTGTACACGCTCATGCAACAGACAAATTTATAA
- Protein Sequence
- MDQKQFVGDNSNFMSVPSPTSSQSSMSSTTSGSSFHSGYCYTSPETDYNTAFTSIPTRNLNAAHFSQDSFTCQLAILEEPTEKFRFRYKSEMHGTHGSLNGERSSKTKKTFPEVELRNFMGSAVIRCSLYQTNLDKPSPHSHQLVVRKEDTDQCDPHDVYVSQEKGYIARFENMGIIHTAKKNICDALYTKKKQKMMFEMGLTELSQRQEKQLRDEAEREGKLMNLNQVRLCFEAFKIDEGSRVWERICNPVYSRPINNRKSALTGELKICRLSAVAGSAEGKEDLILLVEKVSKKNIQVRFYEVSDDDQVWEAFGEFSDTDVHHQYAIVVRTPPYKNKDIDSNVNVFIELVRKSDDERSAPVTFRYKPRDVVMSRKRRRTSYQSNTSSPVSSSELPVPVAVVIPQGHFQHPQYPQQQQQHQTHHQQHQTHQQQTISQEFDKDLQLNLLLQSVTENNSDELARMLPLDFIMLDANGDELSVDGGATVMRDSMPANTPRLVHDGVAKQSVRLEKKIPNQNLKLRHPKMKSLLSAANDPKLTTKEQAEAIQKIFDDYVAENDAEDTIMHDIVKNDYLTDGMLLVRLLQKYNLIELLSQTNHKGQTPLHVACIFDQPFFIRPLLGQKCDPNIQDSNNNTALHIAIAENLKQCLESFIIYINSNKSNLDANLANDKGFTPLHLAIRANNIELVEILLRKGNASAKTAISSDGNNALHLAVQCKNKRMVKCLLDNTDVRVNAKNRSGHTAIDLAKAIVSETEKKEILDLLLPKLPPSEASEGDAMSIDSIKDEPDDDSSPDEDEERSEVEEKNEEVCFIELLKAEKTKTLLAKLLNVDNKWKKLSTELQVSHLTCLWVNADAMLIYLYDNVSPLKLFTALQAVDPSIVYTLMQQTNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -