Spar007062.1
Basic Information
- Insect
- Syrista parreyssii
- Gene Symbol
- Sub1
- Assembly
- GCA_030142615.1
- Location
- JARQTG010000209.1:2209319-2209887[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.1 1.7e+03 -1.5 0.6 24 37 33 46 26 46 0.61 2 2 4.5e-26 7.8e-22 76.5 0.5 1 50 59 109 59 111 0.96
Sequence Information
- Coding Sequence
- ATGCCTAAGTCGAAGGCATATGTTTCCAGCTCAGAATCCAATAATGACAGTGAGGAGgaagtgaaagaagaaacttCTAAGAAAAGCAACAAGAGACAAGtgccagaaaaaaaagaaaagcctgCACCAAGCAAAAAAGCAAAGCAAGAAtcagatgaagatgaagatccAATTTGGGAAATAGGAAACAATCGACGAGTGATTGTGCGCGAGTTTAAGGGAAATATGTATGTCGACATCAGGGAGATGTATCTTGATAAAAGTGGAGACTTGAAACCAGGAAAGAAAGGTATATCACTTAACATGATCCAGTGGAGAAAGTTTGTCTCCTTTGTTGAAGAGATTGATCGTGTTGCTAAGTCCAAgtgttaa
- Protein Sequence
- MPKSKAYVSSSESNNDSEEEVKEETSKKSNKRQVPEKKEKPAPSKKAKQESDEDEDPIWEIGNNRRVIVREFKGNMYVDIREMYLDKSGDLKPGKKGISLNMIQWRKFVSFVEEIDRVAKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00292959;
- 90% Identity
- -
- 80% Identity
- -