Basic Information

Insect: Syrista parreyssii
Gene Symbol: lola
Assembly: GCA_030142615.1
Location: JARQTG010000168.1:627030-633551[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.2e-16 8.9e-13 47.7 0.0 2 42 383 424 382 427 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.2e-16	8.9e-13	47.7	0.0	2	42	383	424	382	427	0.94

Sequence Information

Coding Sequence: ATGTCGATGCAACAGTTTTGTTTGCGCTGGAACAATCATCAGCCCAACTTTATATCGGTTTTCTCCAGTTTGTTGAATAATGAGACTTTGGTGGATGTCACATTAGCTGCCGAGGGAAGGCACTTACAGGCACATAAAGTTGTCTTGTCTGCGTGtagtacatattttcaatcgCTCTTCACTGTAAATCCTTGTCAGCATCCTATTGTCATTCTTAAGGATGTTAAATTCTCTGATCTGAAAATCATGGTagattttatgtattatggAGAAGTCAATGTCTCGCAGGATCAATTACCATCGattattaaaACTGCAGAGagtctaaaaataaaaggtttAGCAGAAATGCACACAGCCAGTTTAACAAAATGGCCAAGCGGTGGGAGTGAACCCGGCGGAGGAGACAGAGGTGAATCATGTTCACCAACACCATCACCACTGTCACCATCGTTCCGTAGAAAACGACTGCGCAAAACTTCCACAGGGTCAACTTCCGGCTCTGGAGAGAAGCAAGAAGAGATAAATGAGATCACCTTAGTCGCGACAAACGTGGTAAAGCCTGAACCATTAATCGTCTCGCAAGAAAGTGGAGAAAATCTAAGAAGACCATTGAACACCAGTACGGAGTCCCAGGGCAGTATCGATGAAGACCAAATATCTATTATGAGTAACATGGAAAGTAGCTCAGCCACGACTCCAGCACAGAGTGAAGGTTCGATGCAAGATGTCAGCAGTCAACAATCTGGTTCAAATGTTGGACAAAGTTCAGTCCCACCTCAACCACCAGCTCATCAAGGATTACAATGGACAATAATGGAGCACACGTATCCACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCATCCTCGGCGTTCACCACGCCCGAAATATCCGGGAGCTCGTCGTCAGCGATCGGCGAGCAGTACTCCGGTACTAGCACCACTGGTTCCAGCTGCGCCCTCACGAGCTATCCGAATTCCTCGCACGGCACGTTGCAGCATACCTCCTCAtcgtcatcttcatcatcgAGCGGCCCGACCCCATCGACGCAGTGTCCAAGTAACTGTCAGAGTCCTTGCGCCAGCCCACAGACAGCAATCAAGAGGAAACGCTCGACGAATCCTCAGGCAGacgaaaattttatcaggGCGCTGGACGCAGTTCGTTATGGCGGCATTGGATTCTGCAAGGCGGCCAGGATGTTCGGCGTCAACAACCGGACCCTCTGGCTCGAGTACAAGAAGAGGGGCTATCCGAACAATCGTCCCAGCCTTAAGTCCCGGGTCAAACAGGAAGTGAACTCTTCTCCACCGCCTGCACCTTCTACTCAGCCTGTCAGCTCTCAAAGTCCAACGCCGATGGGACCACCAACCACTCCTCATAGTAGTCACAATACTCATAGCACTCACACTATGCTTACCACGCATAGTCCACATGCTATGCTTAGCGGATATATTGACAGCAGGCATACCGATTACGCTCTGCAGAGCAGCACTGTCCAGTGCAAACAGGTGGGCACGAAACGAGGTCGACTGTTAATACGTCAACCTCGAGTGAAAAAGGAGTGTGAACCATCAAGGCAGCCATCACCGGAGAGCGAACCGAATTCGCCGCAGACGAGCAGTGGTGCTACGACTCCAGGTGTCCAGCAACCGTTGACGCCGATACTAAACCTTCCTAAGGGTCAGGAATGGGATGAGGAGGGTCAAAGAATATCACAGAACTTGTTACAGTGTACGTCGACGCACCCGCAACAGAATCCAACGGCGGGGAGCCCTTCGAACCTTCTAACTGTTCCCCAGATGTCGTATCTGGTGAAGCAACATTCACATCCGGTATTACCCAGTCAACAAGCACCGGCATCCGGGAGTTACTTTATACATAGACAACACTCCAATCCTGAGTACCCTGGTAGGACGACGAGTCCTAGCATAGTCATTGACTCAGTTCCTACGACGCCATCTATTGTCAAAGTCGAGGAGAGTTCAAGGGACACTGCAAGAGAAGGAACGAATAATTCTGCTGGAGGCGGTCTCAGGGTCCGGACGACAGAACTTCGGCGAAGTAGCTCATCTCCACAGACGGGATCTACCAGGTGCGAGGTGACAAGGACTCGCGGAGGCTCTGGTGATCAACGGCTTGGACATTGTCCTGTTCAACGACCTGGACCTGCGCTTGGTTGTAATCATTGCTGGAATACTATTGATGGACATGGACGTATCCTTAGGAGGAAGACTAAGTATCATTGTCCGGAGTGCCAGATCAACCTCTGCATCGTACCCTGCTTTCAGGAATTTCATGAACGGCAACGTGAGGCATCCATCCTGAGGCCTTTACCGAAAACTAGCTCTATTTGA
Protein Sequence: MSMQQFCLRWNNHQPNFISVFSSLLNNETLVDVTLAAEGRHLQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDVKFSDLKIMVDFMYYGEVNVSQDQLPSIIKTAESLKIKGLAEMHTASLTKWPSGGSEPGGGDRGESCSPTPSPLSPSFRRKRLRKTSTGSTSGSGEKQEEINEITLVATNVVKPEPLIVSQESGENLRRPLNTSTESQGSIDEDQISIMSNMESSSATTPAQSEGSMQDVSSQQSGSNVGQSSVPPQPPAHQGLQWTIMEHTYPRFALSSCQTNLSIQASSAFTTPEISGSSSSAIGEQYSGTSTTGSSCALTSYPNSSHGTLQHTSSSSSSSSSGPTPSTQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPAPSTQPVSSQSPTPMGPPTTPHSSHNTHSTHTMLTTHSPHAMLSGYIDSRHTDYALQSSTVQCKQVGTKRGRLLIRQPRVKKECEPSRQPSPESEPNSPQTSSGATTPGVQQPLTPILNLPKGQEWDEEGQRISQNLLQCTSTHPQQNPTAGSPSNLLTVPQMSYLVKQHSHPVLPSQQAPASGSYFIHRQHSNPEYPGRTTSPSIVIDSVPTTPSIVKVEESSRDTAREGTNNSAGGGLRVRTTELRRSSSSPQTGSTRCEVTRTRGGSGDQRLGHCPVQRPGPALGCNHCWNTIDGHGRILRRKTKYHCPECQINLCIVPCFQEFHERQREASILRPLPKTSSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01474601; iTF_01395215; iTF_01474803; iTF_00296129; iTF_00298226; iTF_00295927; iTF_00298430; iTF_01473096; iTF_01473284; iTF_00297465; iTF_00297667;
90% Identity: iTF_01474601; iTF_01395215; iTF_01474803; iTF_00296129; iTF_00298226; iTF_00295927; iTF_00298430; iTF_01473096; iTF_01473284; iTF_00297465; iTF_00297667;
80% Identity: iTF_01395215;