Spar009740.1
Basic Information
- Insect
- Syrista parreyssii
- Gene Symbol
- KBTBD4
- Assembly
- GCA_030142615.1
- Location
- JARQTG010000280.1:1748500-1750755[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 5.9 8.4e+03 -3.5 0.3 31 40 181 191 181 191 0.88 2 5 3e-06 0.0043 16.7 0.0 2 38 200 236 199 242 0.86 3 5 4.6e-12 6.6e-09 35.3 0.1 5 39 253 286 250 293 0.85 4 5 0.074 1.1e+02 2.6 0.0 21 34 320 333 306 338 0.80 5 5 3.6e-12 5.1e-09 35.6 0.0 3 39 363 399 348 405 0.94
Sequence Information
- Coding Sequence
- ATGTCTGAAGTTGCCAGTCAACCTCAAATTGACCAAAGCTACTGTTTCAAATGGAGCGATTATCAGAATCATTTATCAGGCGTTGTTCGTCAGCTGCTGGAAGAGGATTGCATGGTGGATGTAACTCTTTCTGCAGCAGGGGAACGTATTCATGCTCATCGGATTGTCCTGTGCGCTTGTAGCACATTATTTCAAgaAGTTCTTAGCCAGGTCAATGAAGATCATCCGACAATTATATTAAGTGATATATCTCCTCAAGATGTGAGATCTATTGTAGAATTTACATACCATGGCGAAGTACGCATACCTGTAGAGAATATTAGCAATTTATTGGATGCAGCACATTCTTTAAAGATCTGTGGCCTTATGGAGATTGATGGTTTGGATGAAAATGATGCATCTACTAGTATAAAAGACTTTGGTGATGATAGTATAGAGCCATCAACCGAACTGAATGAAACAGAAGATAAGGCACTAAGTGCTTTGGAGAGTGAATATGATAGCATTACTGATAGTACCGAACAGAATGTACCTGGAGTTtctactataaataaaaaaaggaagaggagacgAGACATAATTAAGAGAGAATATAGTGAGGATATGCTTGTATCAGCTATTAATGATCTTCGTTCTGGACAGACACTGATAGAAGCTTctaccaaaaataatatcccgCGTTCTACACTGTATATGCGTGCTAAAGCATTAGGAATACATTTAAATGCTACGAGAAATGAATATCCTGCCGAATGTATGAAAGCTGCTATAAATGCTGTCATTGGAGGTTCAAGTTTGCAACATGCAGCAGAGATGTACAGTATTCCCAAAACTGTTCTATGGAGACGTATACAGAAGGAAGgatatcaaattttacgtTCTGAAATGAAAAGATCATATGGCTCTGACAAAAGAGAAGCTGCTGTTAAAGCTTTGGAAAGAGGGGAAAATCTGACTAAAGTGGCACTTGAGTTTCAGattccaAAAACAACATTGTTTAGAGACAAGGCCAGATTGGTAGACGAAGGTAAATTACCACTATCATTCTGGAAAAAAcgtaaaacagaaaatgaGGAATTGAAAAAGACACGCCTAGAAGAAGCAGTAGCTGCTTGTAAGGGAGGTAAAATGTCACAGGCGGCAGCATCAATGACTTATCACATACCAAAAACAACCATATGGCGACGCTTACAACAAGATGGAAAAAAACATAATCGAACATCAAATAGTAAACGACAGCAAAGATTGACAAACACAAATGAAGAAACACAGGAGAAGCCACAGGAAGGATCTGAATATGCTTTTTGCGAgGTATCTTCAGAAATTCCAATAGCATACATAGATGAGAATAGTATCCCTGAGGACTCTGTTATCATATTGACTACTGATGATGTGGAAGCAATTAACTTAGAGGAGGGTAGACAAATTATAGTTAGCTCGGAGTCTGGTCAAGAATATGTTCCTTGTACTTTAAGCATAGAAGATAATGCAAATTACACACCAGCTGAAAGTTAA
- Protein Sequence
- MSEVASQPQIDQSYCFKWSDYQNHLSGVVRQLLEEDCMVDVTLSAAGERIHAHRIVLCACSTLFQEVLSQVNEDHPTIILSDISPQDVRSIVEFTYHGEVRIPVENISNLLDAAHSLKICGLMEIDGLDENDASTSIKDFGDDSIEPSTELNETEDKALSALESEYDSITDSTEQNVPGVSTINKKRKRRRDIIKREYSEDMLVSAINDLRSGQTLIEASTKNNIPRSTLYMRAKALGIHLNATRNEYPAECMKAAINAVIGGSSLQHAAEMYSIPKTVLWRRIQKEGYQILRSEMKRSYGSDKREAAVKALERGENLTKVALEFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKTRLEEAVAACKGGKMSQAAASMTYHIPKTTIWRRLQQDGKKHNRTSNSKRQQRLTNTNEETQEKPQEGSEYAFCEVSSEIPIAYIDENSIPEDSVIILTTDDVEAINLEEGRQIIVSSESGQEYVPCTLSIEDNANYTPAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538095;
- 90% Identity
- iTF_00293633;
- 80% Identity
- iTF_01395236;