Basic Information

Insect: Synergus umbraculus
Gene Symbol: ZFX
Assembly: GCA_900474325.1
Location: UCOK01010398.1:24254-26461[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.7 3.1e+02 2.7 2.7 1 23 73 96 73 96 0.81

2 14 2.3e-06 0.00026 21.8 0.6 3 23 178 199 176 199 0.96

3 14 0.0019 0.21 12.6 0.1 2 23 212 233 212 233 0.98

4 14 3.8e-05 0.0043 18.0 1.9 2 23 236 257 235 257 0.96

5 14 0.0052 0.6 11.2 0.3 1 23 263 285 263 285 0.95

6 14 8.9e-06 0.001 19.9 4.5 2 23 292 313 291 314 0.95

7 14 0.04 4.6 8.4 3.7 5 23 327 345 326 345 0.97

8 14 8e-06 0.00092 20.1 1.5 3 23 352 373 351 373 0.97

9 14 0.0037 0.42 11.7 0.3 2 23 389 409 388 409 0.97

10 14 2.4e-05 0.0028 18.6 0.7 1 20 415 434 415 437 0.92

11 14 3e-05 0.0035 18.3 2.7 1 23 445 467 445 467 0.99

12 14 0.00084 0.097 13.7 3.2 1 23 473 495 473 495 0.97

13 14 4e-06 0.00046 21.0 4.8 1 23 501 523 501 523 0.99

14 14 0.0028 0.32 12.1 6.6 1 23 529 551 529 552 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.7	3.1e+02	2.7	2.7	1	23	73	96	73	96	0.81
2	14	2.3e-06	0.00026	21.8	0.6	3	23	178	199	176	199	0.96
3	14	0.0019	0.21	12.6	0.1	2	23	212	233	212	233	0.98
4	14	3.8e-05	0.0043	18.0	1.9	2	23	236	257	235	257	0.96
5	14	0.0052	0.6	11.2	0.3	1	23	263	285	263	285	0.95
6	14	8.9e-06	0.001	19.9	4.5	2	23	292	313	291	314	0.95
7	14	0.04	4.6	8.4	3.7	5	23	327	345	326	345	0.97
8	14	8e-06	0.00092	20.1	1.5	3	23	352	373	351	373	0.97
9	14	0.0037	0.42	11.7	0.3	2	23	389	409	388	409	0.97
10	14	2.4e-05	0.0028	18.6	0.7	1	20	415	434	415	437	0.92
11	14	3e-05	0.0035	18.3	2.7	1	23	445	467	445	467	0.99
12	14	0.00084	0.097	13.7	3.2	1	23	473	495	473	495	0.97
13	14	4e-06	0.00046	21.0	4.8	1	23	501	523	501	523	0.99
14	14	0.0028	0.32	12.1	6.6	1	23	529	551	529	552	0.96

Sequence Information

Coding Sequence: ATGGttattttgaatcaatttcccAAGaTTTACATTGGTCAAGAAACATCACGTATGTCCACATCATATGATCTTATGGCTCGCGAAACTTGGGATGAATCCGAAGGTTCAGATAATGAGATAGGAGGATCTCTTTTGGATAGCCGATCCTTAGCGACACATTTTACATCTAGTCTGTTTTTAGATCGTGATAGAAAAACACCGACTCGGCGAATTTTCAAATGCTCATTCTGTACTGAAGTTTTTGAATGTCCCAAGGAACGCAGAGTTCATAGTACAACTGTTCACAAAGATGCTGGTCCTAGCAATAGTAGAGATCCTACTCAACAGACTGAAatgaaagatattaaattattggatGGACGTATGAACatgtttgaagatatttttgtgTCAGGACTGCATGTTCAACAAACATATCACCAACCACTGTTACATCAGCTTCAACCACCTCAACAATTAGATGTAGGAAAATCTGAGAATGATAAAAAGGTtgataatttaagaattccCACCTCAATGGacattatttgcaatatttgtaATCAAAGTTTTACTAGTGAGAAGTCGTTACAAATTCATCAGAGAAGAATGCATATTAAAGAATCTGTAAAGCGCGTTAGAGAAAATGCCAAGTGTCAGATTTGTAATCAGGAATTTCCTTCGGTTATTTTGTTTAATgcacatttaaaaatacatccTCTAGAATGCGGTCAGTGtggtaaatatttctataggaaacaaaatttcaaattacacGTGAAGCGGCATCTTGGAATAAAACCCTTTCCATGTTCAGTATGCGACAAAGCTTTTCTTACTAAGCAAAAGCTTGATGAACACACCAATGGACACACTGGCAATGCTCCCGTCAAATGCAATTTATGTAATGAAACTTTTCGTAGATACTCGAATTTAACTCAACATAAGAATAGACATCATTTGCAcgtgaaaaaaaagttgaaggaTTACATATGTCACTGTGGTGAAGTATTTCATACAAAGAAGAAACTCGCGTGGCATAAAGAAACGCATGATGAAAAACCAAAAGCTTGTACATATTGTAACGAAAGGTTCATTCACATGGCTAGCCTAACTCGTCACATGCGACGTGCTCACAATCGAAGATTCGTTCCTGACGCTCAAAGGGAAAGTGAAAATGTAGAGTGTCCGATATGTAAATGTATTTACTTACGGTCTTCTTTAGCTGTACATATGAGAGTGCATAATGGTGAGCGGCCATACGAGTGTCAAGTTTGCTCTAAAGCTTTTAGTACGAAATGGAATTTACAATTGCATAAATGGACGCATGCAGCAAGAAGTACGAAACCATTTAAATGTAATCAATGCAGTGCTGCCTTTTATCGACATAGTGACTACACGGCACACATGAATTCTCACAGAAATGTACGGCCTTATACGTGCAATTACTGTGGAGCTCAGTTTATACGAAAATACAATTGTCTCAGGCATGTCAAGGAAcatgaagaaaataaagctTATACATGTGATACATGTAATAAAACTTTTCATAGATCGTATTACCTCAAAGAACATTTGCGTGTACATTCGGGTGCAAAACCATATTCGTGTCATATTTGTGGTAAATTGAGTAGTACTAAATCTAATCACAATAAACATGTGAGAATTCATCATGCGCGAGAACCTGTaaatactgaaaattaa
Protein Sequence: MVILNQFPKIYIGQETSRMSTSYDLMARETWDESEGSDNEIGGSLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCSFCTEVFECPKERRVHSTTVHKDAGPSNSRDPTQQTEMKDIKLLDGRMNMFEDIFVSGLHVQQTYHQPLLHQLQPPQQLDVGKSENDKKVDNLRIPTSMDIICNICNQSFTSEKSLQIHQRRMHIKESVKRVRENAKCQICNQEFPSVILFNAHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCSVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDTCNKTFHRSYYLKEHLRVHSGAKPYSCHICGKLSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01389664;
90% Identity: iTF_01389664;
80% Identity: -