Sumb003940.1
Basic Information
- Insect
- Synergus umbraculus
- Gene Symbol
- spop-a
- Assembly
- GCA_900474325.1
- Location
- UCOK01006775.1:5827-8173[+]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1e-22 3.5e-20 72.7 0.5 5 109 142 244 138 245 0.95 2 5 0.37 1.3e+02 3.4 0.1 78 107 245 274 239 276 0.83 3 5 2e-23 6.8e-21 75.0 0.5 4 109 461 565 458 566 0.90 4 5 1.5 5e+02 1.4 0.0 79 106 567 594 564 598 0.85 5 5 2.6 8.7e+02 0.7 0.0 56 83 608 635 599 641 0.80
Sequence Information
- Coding Sequence
- ATGGAACCAAAGCGGATAATACATTTGTTTAGCGAGTCGTTTTGTGTATGGACAGTaacaaaaagggattttataaaCTTCCAAGAAAAAGAGTTTATCAAGTCTCCTCTCTACTGTGCCAAAGAATTCGCCAATTTGCAGTGGGTTTTCTTGTTgaaaaaatcaggaaaatgTAGTTACAATTGCATCCTCCgcacgaaaaaatgtattgacGAAAAATCGTCTCGACAATTGATTTTCACAATATATATTAGGGGTATAACAAAAGAAACGTCGGCATTTTGTCTTCTTAATACTTCTACAACATGCAGACTACgaagacaattttttcttcacAACGCAAGAAgttataattcaattattatagcTTTTAGTATTAGTTGTGCTGTAAAACCAgtccaatttttcaacaatGAATTTTTCTTCCTCAACAAAAAGTTGAGCGATTTCGTATTTATCGTTGGAAAAGAACGATATTCTGTACATAAAATGATACTTGCCGCAAACAGTCCTGTTTTCACTGCAATGTTTTCCTgtgaaatgaaagaaaactctCTAAACCAAATGGAAATCGTAGACTTCGAACCCGAATTaataagagaatttttatgctttttgtACAAAGGCaagatttcaaattggaaAAAGTTTGGATGCGGACTCTTTGAAGTTGCTCATAAGTATGAAGTCGAAAGCTTGAAAAGTCAATGTCAATTATACTTAGAGAAAAACTTAACTGTTAAAAATGTGATTGATCTTCTCATTTTTTCGAACCATTATACTATCGAAAGTCTCAAGAAGAAGTGTATTTCTTTGAtcaacaaagaattcaaaaggattCGAGcacaagaaaattataagaatctGCGAGAAACACATCCTCATCTTCTTACAGATATTATTAATGACGACATCAGAAAAGTGCAAGAACCGAGCAATCCGATATTTATAGATGAACTTTCTGAGATATCCTCGATACCCATCAAGGATGAAAGAACAAAATCCGGTGTATGGACTATTAACTTAATCGATATTGATACTGAAAGTTTTCGATTTCCTTCAATTGCAATAAAGGAATGTTTCTGGACATTCTTAACATTCGGAAACACAAGGAAAGAAATATTCCTTCGTCTACACAAAGTAAATAATACAGGATTTCACATTACCAATGATTCGTTTAAATTTAAGATTGTtgttaaaaatactaaaacaGTTAAAGTGGAAGTAAAGATTGATGataaagattctaaaataataaaattggatAAAGTTGGTTCAAACTGTTCAAACTTTACAATACTTTGGGAAGTGGAATCGATTTCTAAAGCCGATGAGATCCAGACATCTAAAGATATGCGGCCTTATCTAAGCTACgaggatttttttatgaacCCATATTTAAGCGATATCAATTTTCATAGCGAGGGAAAACAATTTCCTTCTCACAAATTGCTTCTCTATAGTAAAAGTGCCGTATTCAGAAAGAtctttttatctgaaaaagaATCTCCGcagaaacttttaaacattcaaGTCGATGACATAAAGCCGAAAGTTTTTGAAGAATTGCtcagatttatttatacagGGATAGTCGAGAATCTGAATGATATAGCAACTGATCTTTACTTAGCGGCACAAAAATACGAGATACAAGATCTAAAACTTATGTGCGAGAATGCTTTGCTGAAAAATCTTGATTCAGAAAATGTAATATCAACTCTCAATTTCTCTGAAAAGTATAATCTGGAGTGTTTGAAGGATGAGTGTATTTTCCTGAttgttaaagatttcatcagatttgaGAAAAAGTTGGAAAGTGTGGAAAAGTTGGATCCGAAGGTAATAATGGAAATTCTAGATGCAATCCACACCGGAAAAAGACCATTGATGATAAGAAATGTAAATCGAGAtgtatcatattttataaaccgaacttttaaagatattttgtatatttttgcaTCGGAAATATTAAACGGAATATTAACCCAAATTTCACTCAAGTGTGAGACGACAACCGAAAAAATGCCTACTCTTGCGATGAAGTTAGCAGGATTTGCCGCTGGATTTTTAATCGCAAGTTATTACGAAAGAATTTGA
- Protein Sequence
- MEPKRIIHLFSESFCVWTVTKRDFINFQEKEFIKSPLYCAKEFANLQWVFLLKKSGKCSYNCILRTKKCIDEKSSRQLIFTIYIRGITKETSAFCLLNTSTTCRLRRQFFLHNARSYNSIIIAFSISCAVKPVQFFNNEFFFLNKKLSDFVFIVGKERYSVHKMILAANSPVFTAMFSCEMKENSLNQMEIVDFEPELIREFLCFLYKGKISNWKKFGCGLFEVAHKYEVESLKSQCQLYLEKNLTVKNVIDLLIFSNHYTIESLKKKCISLINKEFKRIRAQENYKNLRETHPHLLTDIINDDIRKVQEPSNPIFIDELSEISSIPIKDERTKSGVWTINLIDIDTESFRFPSIAIKECFWTFLTFGNTRKEIFLRLHKVNNTGFHITNDSFKFKIVVKNTKTVKVEVKIDDKDSKIIKLDKVGSNCSNFTILWEVESISKADEIQTSKDMRPYLSYEDFFMNPYLSDINFHSEGKQFPSHKLLLYSKSAVFRKIFLSEKESPQKLLNIQVDDIKPKVFEELLRFIYTGIVENLNDIATDLYLAAQKYEIQDLKLMCENALLKNLDSENVISTLNFSEKYNLECLKDECIFLIVKDFIRFEKKLESVEKLDPKVIMEILDAIHTGKRPLMIRNVNRDVSYFINRTFKDILYIFASEILNGILTQISLKCETTTEKMPTLAMKLAGFAAGFLIASYYERI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01392105;
- 90% Identity
- -
- 80% Identity
- -