Sumb023415.1
Basic Information
- Insect
- Synergus umbraculus
- Gene Symbol
- SUB1
- Assembly
- GCA_900474325.1
- Location
- UCOK01019286.1:50690-51789[-]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.34 9.1e+03 -3.2 0.9 27 34 20 27 18 29 0.61 2 2 1.6e-23 4.2e-19 68.3 0.4 1 51 56 106 56 107 0.95
Sequence Information
- Coding Sequence
- ATGCCGAAATCAAAAGAATTTGTTGAAAGTGACGACAGCAGTAGCAGTTCAGAGACTGAgaagaaaggaaagaaaagGCCCAAGaaggaaattaaagagaaGGAGAAAGAGGCTAAAGGTGGATCATCAAgcaaaaaatccaaaaacgaTTCGGGAGAACCAGTCTGGGACTTAGGTCAAAATAGACAAGTCACTGTTCGTAAATGGAAAGGAAAAACATATATTGATATTCGCCAGATGTTCCTCGATGCAAAAGGAGATTGGAGACATGGCAAAGGAATATCTTTGACCCCAGAACTGTGGAATAATTTCATGGAAGTGGTGGAGGATGTTAACAAGACTGTCAAGGAACAATGTTAA
- Protein Sequence
- MPKSKEFVESDDSSSSSETEKKGKKRPKKEIKEKEKEAKGGSSSKKSKNDSGEPVWDLGQNRQVTVRKWKGKTYIDIRQMFLDAKGDWRHGKGISLTPELWNNFMEVVEDVNKTVKEQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01389439;
- 90% Identity
- iTF_01389439;
- 80% Identity
- iTF_01391988;