Sumb004246.1
Basic Information
- Insect
- Synergus umbraculus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_900474325.1
- Location
- UCOK01018760.1:139979-150613[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 1.1e-14 54.4 0.1 1 45 431 476 431 476 0.96 2 2 3.7e-18 3.3e-15 56.1 0.0 1 43 855 898 855 900 0.95
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATCAAGACACCCTGTACACCGGGCCTCGCAGCGAATCGTCAACGACGACGCAGCAgcaacagcaacaacaacaacaagcCCTTCATCAGAGGCTATACTCAACGCCGCAAGGCTGCAATCTAGATGCAGCTGCTTTGAACCAGGTGGCTCACCTGCGTCCCCAGGTGCTGCCAGCTCAGATAAAACAGGAGCTGTTaattcccaaaaacctctCGAATCACCATCCCACGCAGGAGGACCAACAGGACCACCCAGAGCAACGGGACCAGGAGGAATCGAATTGTGTCAAGGTCGAGATCGAAAATTCGGAGGTTGGAGTCCAGGACTCCAGGACCGAAACAACCACTACTACGACGGTAACGACCAACAACAGTACGAATTCGACGGGAGTGAGGAGACGAAATCGAGGAGACGACGAGAACGGAAACGAAGACGAGGAAGAGGACGAGGCAGAAAAGAGGCTCAAGACCAACCAGGAAGACGTCAGGTCCACCAATCACCTCAACGAGAACGAACGAACCTCCAAAGAAGACGACCCGACCAAAACCAACGACTCGGAAGGGACCAAGGAACGGATAGAGGGAGTCGCGTTGGAACGAATACAGGTGACACAGGGTTTGTTGAGGGTAAAAAAGGAGGAGGAACTTCAGGAGGTACCAGTTCCTGGCAGTGGATTAAATTCGACCTCTGCGGCGACACCCAACTCGCTATCAGCGACCAAGGAGACGGAAGTGATTCCAGAAAACGTGTTCCTTGGAAATCGGATAGTGAGTCCTCCACCGGAAGATTGGAAGCCGTTGGACAAGTGTTACTTCTGTCTCGATGGCAAGCTGCCACACGACGACCAGCCGCCCCTTAGTCCTCAGAGTGACAGCAGCAGCAGTTCTCGATCAGCGGAGTCTCCGATGTCAGTTCAGGTCGACCCCATGGCGGCATCCGTGGTGGCAGCCGCTCTTGGCTCATACCCAACATTACTGCCACAATGGTGTCTACCACCGAGGGAGGCACCCCACATCAACGTTCAAGCACACCAGGATAATGCTTCGGGAGCTGATCAACCCCTTGATCTCTCGGCTAAGCCAAAAAATTCTCAGGACAACAACATATCCTTGTTGGAACAACAAAAAATACCTCTGCGAATGCCGGCGGGACTCGACCCCAAGACGATATTTAATTCCTGTTATCGGGCGAAACCAAGGTTGACTGGTCCAGCAGGTGTTGGTGGTGTTCCAGTGGCGGGTGCTGGCGGTGGTAGAAGGACTTATACTGAAGAGGAGCTGCAGGCAGCCCTGAGGGACATTCAGAGCGGAAAACTGGGGACTCGTAGGGCAGCAGTGATCTATGGAATTCCCAGAAGCACTCTTCGCAACAAGGTCTACAAGCTTGCGATGGAACGCGAAAGGGACGCGTCCCTAACAAGCACCATTTCACACCCTCACGAGTCTGGCGTTCCAGCCGCCACGATTTCGACTACCACCTCCACCACCACCACTACAACAACCACAATAACACCAAATACGACCCAAAATGCCTCTGCAACCACTCCGCCCTCGCAAGTGGATGAGTTTAACACTCGGCCACTTGGCGCACGCGAGGTGACGAGGCTTGAGgGGGACGAAAAGGAACTGTCGGGTGCTGAGGAAGAAAAGGAGGTGGAGAAGGCATTGCTGAAACCGTTGCTCTCTCTTGAGGACTTGGTGAGGTTTTCGGCCCTTGAAGGAAGTGGTGGAGATTCCTTAAGGACTCTTTTACAACGAGGGCAGGAAACGGGTACCGAGTGGCCTGGTTTTGAACACGCAAACATTGGTCCCTACATCCAAAAGATGTTAGCTGCTGCAACACCTTTTAAAGGACTCCCAGAGTCGCCAGACTACCGGATTCCCGAGGTTATGAGGAGGCTAATGAGCGAGGACAAGAGGCTGAGTAAAGACGTGAACGGTGATCAATCTGGCCACCATCAGCAGCAGAATCATTCTCAACAACAGCAACGTGGCCCGATGACGAATGACGATTTCAATCCAAGTATCGAAGAAGAGGCGAGTGACAGTGCTCAGGGCAGAGCCATACTAAAAATTCCGTCCTACAAACCGGCAAATGCGCCGGGTTCCAGCAAGAATGGCGAGCCTAACTCAGCTGCTTTCGCACAGGGCTTCGCTGCAGGAAGCGGCACTGTTGCCGGAAGTCCTGGTTTAATGGAGCGTTCGAGTCCCGCATTTTCCGGCACCAGTAGTCCCACGAATTCTTTGGTAGGCAAGGGCGTGGGTGTCAACTTCCGCGACGTCATCGCAAAGAGCATAAGTGTCAAGTTCCAAGAGGGTCAATCACCGGGAGAAATGCCAGGTCAGGGAGGAGTCGCTCAGTCGCCTCAATCCATGATGGGCGAGTCGAATCCCTTCAAAAGAGTACGTTATACGCCTCCTCAAACGGCTCAACAGCAACAGCAGAAGCAACAACAGGCTCAATCTCAAGATAAACAAGGAAAGCCGGGAACTGGTGGCAAGGGTACACGACCCAAACGGggaaagtatcgaaactacgATCGAGATAGTCTCGTTGAGGCAGTGCGGGCTGTGCAGAGAGGAGAGATGAGTGTTCATCGAGCTGGAAGCTACTACGGGGTTCCACATTCCACTCTTGAGTACAAAGTCAAGGAGAGGCATCTTATGAGGCCACGAAAAAGAGATCAAAAGCCACCAGACGACAAGGCGAAGGAGACCGTAACTGCGCCCGGAGTCATGCGACCTGGAGCACCTGACAAAAAGCCTCAAATGAAACCTCAGAAACCCTTCACACCTCCTGGAGGAATGCCAGGTCCAAATGGCATGAAGATGCCGCCCTTCATGGAAGGCATGCCTCCACTTCCGTTCGCTCATCCTTTCAACTTTTGGGGTCCAGCGCCTTTCATGCCCACACCCTTCATGGGGGGAGCTCCCAACGTCCCAGGCATGCTTCCCGAGCAGTATTTCGCTACTCAGAGGATGCGGGGACTCCAGGAACAGCAGAGGAACGCGATAGTCCAGCAGCATCAGCAACGAGATCGTGATGGCAATAATGTATCAGCTGAACCAGGAACGTCTAACTCTCGAGGTTCGATCGTGAAATCTACGAGGGAAATCGCCGAGAGTCTTTACGACGGTACCGGGGCAAATGGTAGCTTCCTGGACAATCTGATCAGATCGAGTCTGGAGACGGGTATAACGAGGGACCAAAGGGCGATGGTCGAAGCTAGAAGTCAGCAGCAGCAACAAGCAGCTTCGCAGCATCATCCTGAGGCTCTGAGTAGTAAGGCGCTGATCGATCAGCTCTGCAGAAACTCTAGGCGAACGCCTCTTCCGAGGATGACTCAGGACAGCAGCGAGGACGAAAGTTATAGAAGTTCGAGCGGCAGGTCGATACCGGAAAGACCTGAACGGGTACCCACTGTCGACTTAAGTCCTTCGCCTTCCGAAAGAGGTCGAACCGATGATGGTAGCGATCGACTGACCTCACCACCAACGCCTCTACCAGTTTCCAGGGCGAGCAGCAGGGAAGACGATCGCGACCCCAGGATCGATCGCAGCAGTAGGGAGCGGGAAGTTCTCAATGGGGGAAATGAAGACCGGGAGAGAAAGACTCTGAATCTGCAGCAGTCGCAGCAGCAATCGCTGAATCACTACCCGGACTTACACAATCTCTATGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCAACAACAGCAGGAGTACGCGGCCGTAAGTGGGCTGGTGGTGCAACTGCAAAGAGGATACAATTCCGGTACCAACAGGTCCGGTGATCAACCTCCCAACAACCAGCCACAGGAGCAACGCGGCTCAGCGGTGCTCATGGAAGACTCCGTAGAGCAGTAG
- Protein Sequence
- MGRRRWKQYQDTLYTGPRSESSTTTQQQQQQQQQALHQRLYSTPQGCNLDAAALNQVAHLRPQVLPAQIKQELLIPKNLSNHHPTQEDQQDHPEQRDQEESNCVKVEIENSEVGVQDSRTETTTTTTVTTNNSTNSTGVRRRNRGDDENGNEDEEEDEAEKRLKTNQEDVRSTNHLNENERTSKEDDPTKTNDSEGTKERIEGVALERIQVTQGLLRVKKEEELQEVPVPGSGLNSTSAATPNSLSATKETEVIPENVFLGNRIVSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALGSYPTLLPQWCLPPREAPHINVQAHQDNASGADQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGLDPKTIFNSCYRAKPRLTGPAGVGGVPVAGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTISHPHESGVPAATISTTTSTTTTTTTTITPNTTQNASATTPPSQVDEFNTRPLGAREVTRLEGDEKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGQETGTEWPGFEHANIGPYIQKMLAAATPFKGLPESPDYRIPEVMRRLMSEDKRLSKDVNGDQSGHHQQQNHSQQQQRGPMTNDDFNPSIEEEASDSAQGRAILKIPSYKPANAPGSSKNGEPNSAAFAQGFAAGSGTVAGSPGLMERSSPAFSGTSSPTNSLVGKGVGVNFRDVIAKSISVKFQEGQSPGEMPGQGGVAQSPQSMMGESNPFKRVRYTPPQTAQQQQQKQQQAQSQDKQGKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKPPDDKAKETVTAPGVMRPGAPDKKPQMKPQKPFTPPGGMPGPNGMKMPPFMEGMPPLPFAHPFNFWGPAPFMPTPFMGGAPNVPGMLPEQYFATQRMRGLQEQQRNAIVQQHQQRDRDGNNVSAEPGTSNSRGSIVKSTREIAESLYDGTGANGSFLDNLIRSSLETGITRDQRAMVEARSQQQQQAASQHHPEALSSKALIDQLCRNSRRTPLPRMTQDSSEDESYRSSSGRSIPERPERVPTVDLSPSPSERGRTDDGSDRLTSPPTPLPVSRASSREDDRDPRIDRSSREREVLNGGNEDRERKTLNLQQSQQQSLNHYPDLHNLYAVSTDKKSACDSKLIVDHSSQKTQQQQQEYAAVSGLVVQLQRGYNSGTNRSGDQPPNNQPQEQRGSAVLMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00200668;
- 90% Identity
- iTF_00979980;
- 80% Identity
- -